RNA–Protein interactions for RNA: ENST00000526286.1

NANOG-202, Transcript of Nanog homeobox, humanhuman

TSL 1 (best) BASIC

Gene NANOG, Length 870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-202ENST00000526286 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
NANOG-202ENST00000526286 CCDC180Q9P1Z9 1646 aa19.86■□□□□ 0.77
NANOG-202ENST00000526286 ZCCHC6Q5VYS8 1495 aaKnown RBP19.21■□□□□ 0.67
NANOG-202ENST00000526286 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
NANOG-202ENST00000526286 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
NANOG-202ENST00000526286 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
NANOG-202ENST00000526286 MYO15BQ96JP2 1530 aa18.6■□□□□ 0.57
NANOG-202ENST00000526286 SHROOM4Q9ULL8 1493 aa18.58■□□□□ 0.56
NANOG-202ENST00000526286 DCAF8L2P0C7V8 631 aa18.51■□□□□ 0.55
NANOG-202ENST00000526286 ABCC9O60706 1549 aa18.39■□□□□ 0.53
NANOG-202ENST00000526286 NACADO15069 1562 aa18.38■□□□□ 0.53
NANOG-202ENST00000526286 SCRIBQ14160 1630 aa18.17■□□□□ 0.5
NANOG-202ENST00000526286 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
NANOG-202ENST00000526286 SUPT5HO00267 1087 aaKnown RBP17.97■□□□□ 0.47
NANOG-202ENST00000526286 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
NANOG-202ENST00000526286 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
NANOG-202ENST00000526286 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
NANOG-202ENST00000526286 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
NANOG-202ENST00000526286 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
NANOG-202ENST00000526286 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
NANOG-202ENST00000526286 SMARCA4P51532 1647 aa17.48■□□□□ 0.39
NANOG-202ENST00000526286 WIZO95785 1651 aa17.43■□□□□ 0.38
NANOG-202ENST00000526286 TOP2AP11388 1531 aaKnown RBP17.34■□□□□ 0.37
NANOG-202ENST00000526286 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
NANOG-202ENST00000526286 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
NANOG-202ENST00000526286 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
NANOG-202ENST00000526286 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
NANOG-202ENST00000526286 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
NANOG-202ENST00000526286 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
NANOG-202ENST00000526286 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
NANOG-202ENST00000526286 HMGXB3Q12766 1538 aa16.98■□□□□ 0.31
NANOG-202ENST00000526286 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
NANOG-202ENST00000526286 NCAPD3P42695 1498 aa16.92■□□□□ 0.3
NANOG-202ENST00000526286 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
NANOG-202ENST00000526286 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
NANOG-202ENST00000526286 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
NANOG-202ENST00000526286 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
NANOG-202ENST00000526286 EEA1Q15075 1411 aa16.64■□□□□ 0.25
NANOG-202ENST00000526286 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
NANOG-202ENST00000526286 SYNJ1O43426 1573 aa16.61■□□□□ 0.25
NANOG-202ENST00000526286 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
NANOG-202ENST00000526286 CFTRP13569 1480 aa16.6■□□□□ 0.25
NANOG-202ENST00000526286 BIVM-ERCC5R4GMW8 1640 aa16.58■□□□□ 0.24
NANOG-202ENST00000526286 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
NANOG-202ENST00000526286 FAM9AQ8IZU1 332 aaPredicted RBP16.56■□□□□ 0.24
NANOG-202ENST00000526286 SOGA1O94964 1423 aa16.48■□□□□ 0.23
NANOG-202ENST00000526286 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
NANOG-202ENST00000526286 CUX1P39880 1505 aa16.42■□□□□ 0.22
NANOG-202ENST00000526286 KIF21BO75037 1637 aa16.41■□□□□ 0.22
NANOG-202ENST00000526286 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
NANOG-202ENST00000526286 GOLGA3Q08378 1498 aa16.39■□□□□ 0.21
NANOG-202ENST00000526286 RUSC2Q8N2Y8 1516 aa16.39■□□□□ 0.21
NANOG-202ENST00000526286 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
NANOG-202ENST00000526286 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
NANOG-202ENST00000526286 TNIKQ9UKE5 1360 aa16.35■□□□□ 0.21
NANOG-202ENST00000526286 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
NANOG-202ENST00000526286 CEP162Q5TB80 1403 aa16.27■□□□□ 0.19
NANOG-202ENST00000526286 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
NANOG-202ENST00000526286 ERICH3Q5RHP9 1530 aa16.26■□□□□ 0.19
NANOG-202ENST00000526286 EHMT2Q96KQ7 1210 aa16.25■□□□□ 0.19
NANOG-202ENST00000526286 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
NANOG-202ENST00000526286 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
NANOG-202ENST00000526286 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
NANOG-202ENST00000526286 NESP48681 1621 aa16.2■□□□□ 0.18
NANOG-202ENST00000526286 PRXQ9BXM0 1461 aa16.2■□□□□ 0.18
NANOG-202ENST00000526286 RAPGEF2Q9Y4G8 1499 aa16.17■□□□□ 0.18
NANOG-202ENST00000526286 UBTFP17480 764 aaKnown RBP16.17■□□□□ 0.18
NANOG-202ENST00000526286 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
NANOG-202ENST00000526286 TOPBP1Q92547 1522 aa16.17■□□□□ 0.18
NANOG-202ENST00000526286 PDS5BQ9NTI5 1447 aa16.17■□□□□ 0.18
NANOG-202ENST00000526286 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
NANOG-202ENST00000526286 CUX2O14529 1486 aa16.14■□□□□ 0.17
NANOG-202ENST00000526286 ABCA10Q8WWZ4 1543 aa16.1■□□□□ 0.17
NANOG-202ENST00000526286 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
NANOG-202ENST00000526286 KIF21AQ7Z4S6 1674 aa16.09■□□□□ 0.17
NANOG-202ENST00000526286 CLIP1P30622 1438 aa16.09■□□□□ 0.17
NANOG-202ENST00000526286 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
NANOG-202ENST00000526286 WDR97A6NE52 1622 aa16.08■□□□□ 0.17
NANOG-202ENST00000526286 CUL7Q14999 1698 aa16.02■□□□□ 0.16
NANOG-202ENST00000526286 IGF1RP08069 1367 aa16.01■□□□□ 0.15
NANOG-202ENST00000526286 VPS8Q8N3P4 1428 aa16.01■□□□□ 0.15
NANOG-202ENST00000526286 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
NANOG-202ENST00000526286 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
NANOG-202ENST00000526286 ABCA5Q8WWZ7 1642 aa15.98■□□□□ 0.15
NANOG-202ENST00000526286 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
NANOG-202ENST00000526286 CARMIL1Q5VZK9 1371 aa15.96■□□□□ 0.15
NANOG-202ENST00000526286 HRCP23327 699 aa15.94■□□□□ 0.14
NANOG-202ENST00000526286 TARBP1Q13395 1621 aaKnown RBP15.92■□□□□ 0.14
NANOG-202ENST00000526286 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
NANOG-202ENST00000526286 WDR62O43379 1518 aa15.89■□□□□ 0.13
NANOG-202ENST00000526286 CTTNBP2Q8WZ74 1663 aa15.87■□□□□ 0.13
NANOG-202ENST00000526286 GAPVD1Q14C86 1478 aa15.87■□□□□ 0.13
NANOG-202ENST00000526286 ARHGAP35Q9NRY4 1499 aa15.85■□□□□ 0.13
NANOG-202ENST00000526286 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
NANOG-202ENST00000526286 EFCAB5A4FU69 1503 aa15.83■□□□□ 0.12
NANOG-202ENST00000526286 IFT140Q96RY7 1462 aa15.82■□□□□ 0.12
NANOG-202ENST00000526286 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
NANOG-202ENST00000526286 APLP2Q06481 763 aa15.79■□□□□ 0.12
NANOG-202ENST00000526286 PPARGC1BQ86YN6 1023 aaKnown RBP15.79■□□□□ 0.12
NANOG-202ENST00000526286 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms