RNA–Protein interactions for RNA: ENST00000525945.1

GRAMD1B-205, Transcript of GRAM domain containing 1B, humanhuman

TSL 2

Gene GRAMD1B, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-205ENST00000525945 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
GRAMD1B-205ENST00000525945 ABCC9O60706 1549 aa18.97■□□□□ 0.63
GRAMD1B-205ENST00000525945 CCDC180Q9P1Z9 1646 aa18.81■□□□□ 0.6
GRAMD1B-205ENST00000525945 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
GRAMD1B-205ENST00000525945 RB1CC1Q8TDY2 1594 aa18.01■□□□□ 0.47
GRAMD1B-205ENST00000525945 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
GRAMD1B-205ENST00000525945 NACADO15069 1562 aa17.83■□□□□ 0.44
GRAMD1B-205ENST00000525945 DCAF8L2P0C7V8 631 aa17.59■□□□□ 0.41
GRAMD1B-205ENST00000525945 PABPN1Q86U42 306 aaKnown RBP eCLIP17.58■□□□□ 0.4
GRAMD1B-205ENST00000525945 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
GRAMD1B-205ENST00000525945 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
GRAMD1B-205ENST00000525945 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.39
GRAMD1B-205ENST00000525945 BICRAQ9NZM4 1560 aa17.45■□□□□ 0.38
GRAMD1B-205ENST00000525945 SHROOM4Q9ULL8 1493 aa17.29■□□□□ 0.36
GRAMD1B-205ENST00000525945 DCAF1Q9Y4B6 1507 aa17.19■□□□□ 0.34
GRAMD1B-205ENST00000525945 ZCCHC6Q5VYS8 1495 aaKnown RBP17.18■□□□□ 0.34
GRAMD1B-205ENST00000525945 CC2D2AQ9P2K1 1620 aa17.15■□□□□ 0.34
GRAMD1B-205ENST00000525945 CECR2Q9BXF3 1484 aa17.14■□□□□ 0.33
GRAMD1B-205ENST00000525945 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
GRAMD1B-205ENST00000525945 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
GRAMD1B-205ENST00000525945 DNAJC5Q9H3Z4 198 aa16.73■□□□□ 0.27
GRAMD1B-205ENST00000525945 POTEDQ86YR6 584 aa16.72■□□□□ 0.27
GRAMD1B-205ENST00000525945 CUX2O14529 1486 aa16.52■□□□□ 0.23
GRAMD1B-205ENST00000525945 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
GRAMD1B-205ENST00000525945 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
GRAMD1B-205ENST00000525945 ATAD2BQ9ULI0 1458 aa16.34■□□□□ 0.21
GRAMD1B-205ENST00000525945 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
GRAMD1B-205ENST00000525945 HMGXB3Q12766 1538 aa16.32■□□□□ 0.2
GRAMD1B-205ENST00000525945 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
GRAMD1B-205ENST00000525945 NESP48681 1621 aa16.21■□□□□ 0.19
GRAMD1B-205ENST00000525945 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
GRAMD1B-205ENST00000525945 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
GRAMD1B-205ENST00000525945 THOC2Q8NI27 1593 aaKnown RBP16.15■□□□□ 0.18
GRAMD1B-205ENST00000525945 LAMC3Q9Y6N6 1575 aa16.14■□□□□ 0.17
GRAMD1B-205ENST00000525945 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
GRAMD1B-205ENST00000525945 PDS5BQ9NTI5 1447 aa16.04■□□□□ 0.16
GRAMD1B-205ENST00000525945 KIF21AQ7Z4S6 1674 aa16.03■□□□□ 0.16
GRAMD1B-205ENST00000525945 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
GRAMD1B-205ENST00000525945 CADPSQ9ULU8 1353 aa15.91■□□□□ 0.14
GRAMD1B-205ENST00000525945 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
GRAMD1B-205ENST00000525945 WDR62O43379 1518 aa15.89■□□□□ 0.13
GRAMD1B-205ENST00000525945 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
GRAMD1B-205ENST00000525945 CEP164Q9UPV0 1460 aa15.8■□□□□ 0.12
GRAMD1B-205ENST00000525945 WIZO95785 1651 aa15.79■□□□□ 0.12
GRAMD1B-205ENST00000525945 FANCD2Q9BXW9 1451 aa15.74■□□□□ 0.11
GRAMD1B-205ENST00000525945 CFTRP13569 1480 aa15.69■□□□□ 0.1
GRAMD1B-205ENST00000525945 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
GRAMD1B-205ENST00000525945 SENP3Q9H4L4 574 aaPredicted RBP15.61■□□□□ 0.09
GRAMD1B-205ENST00000525945 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
GRAMD1B-205ENST00000525945 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
GRAMD1B-205ENST00000525945 RSF1Q96T23 1441 aaPredicted RBP15.56■□□□□ 0.08
GRAMD1B-205ENST00000525945 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
GRAMD1B-205ENST00000525945 RIMBP3CA6NJZ7 1639 aa15.51■□□□□ 0.07
GRAMD1B-205ENST00000525945 RIMBP3BA6NNM3 1639 aa15.51■□□□□ 0.07
GRAMD1B-205ENST00000525945 RIMBP3Q9UFD9 1639 aa15.51■□□□□ 0.07
GRAMD1B-205ENST00000525945 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
GRAMD1B-205ENST00000525945 PHF23Q9BUL5 403 aaPredicted RBP15.45■□□□□ 0.06
GRAMD1B-205ENST00000525945 ARHGEF11O15085 1522 aa15.44■□□□□ 0.06
GRAMD1B-205ENST00000525945 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
GRAMD1B-205ENST00000525945 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
GRAMD1B-205ENST00000525945 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
GRAMD1B-205ENST00000525945 EIF4G3O43432 1585 aaKnown RBP15.39■□□□□ 0.05
GRAMD1B-205ENST00000525945 CCDC88BA6NC98 1476 aa15.39■□□□□ 0.05
GRAMD1B-205ENST00000525945 DNMBPQ6XZF7 1577 aa15.35■□□□□ 0.05
GRAMD1B-205ENST00000525945 CHD1O14646 1710 aa15.31■□□□□ 0.04
GRAMD1B-205ENST00000525945 CYB5RLQ6IPT4 315 aa15.3■□□□□ 0.04
GRAMD1B-205ENST00000525945 TARBP1Q13395 1621 aaKnown RBP15.29■□□□□ 0.04
GRAMD1B-205ENST00000525945 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.03
GRAMD1B-205ENST00000525945 ARAP1Q96P48 1450 aa15.26■□□□□ 0.03
GRAMD1B-205ENST00000525945 POLA1P09884 1462 aaPredicted RBP15.23■□□□□ 0.03
GRAMD1B-205ENST00000525945 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
GRAMD1B-205ENST00000525945 FBLN2P98095 1184 aa15.22■□□□□ 0.03
GRAMD1B-205ENST00000525945 WDR97A6NE52 1622 aa15.19■□□□□ 0.02
GRAMD1B-205ENST00000525945 SOGA1O94964 1423 aa15.16■□□□□ 0.02
GRAMD1B-205ENST00000525945 RAD54L2Q9Y4B4 1467 aa15.15■□□□□ 0.02
GRAMD1B-205ENST00000525945 CLASP1Q7Z460 1538 aa15.14■□□□□ 0.01
GRAMD1B-205ENST00000525945 SNAPC4Q5SXM2 1469 aa15.14■□□□□ 0.01
GRAMD1B-205ENST00000525945 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
GRAMD1B-205ENST00000525945 SYNJ1O43426 1573 aa15.13■□□□□ 0.01
GRAMD1B-205ENST00000525945 MAGI1Q96QZ7 1491 aaPredicted RBP15.12■□□□□ 0.01
GRAMD1B-205ENST00000525945 FGD5Q6ZNL6 1462 aa15.1■□□□□ 0.01
GRAMD1B-205ENST00000525945 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
GRAMD1B-205ENST00000525945 GRIN2BQ13224 1484 aa15.08■□□□□ 0
GRAMD1B-205ENST00000525945 SYNJ2O15056 1496 aa15.07■□□□□ 0
GRAMD1B-205ENST00000525945 CUX1P39880 1505 aa15.03■□□□□ -0
GRAMD1B-205ENST00000525945 PBRM1Q86U86 1689 aa15.01□□□□□ -0.01
GRAMD1B-205ENST00000525945 GAPVD1Q14C86 1478 aa14.98□□□□□ -0.01
GRAMD1B-205ENST00000525945 ABCA5Q8WWZ7 1642 aa14.94□□□□□ -0.02
GRAMD1B-205ENST00000525945 ABCA10Q8WWZ4 1543 aa14.93□□□□□ -0.02
GRAMD1B-205ENST00000525945 GRIN2AQ12879 1464 aa14.88□□□□□ -0.03
GRAMD1B-205ENST00000525945 FOXD1Q16676 465 aa14.85□□□□□ -0.03
GRAMD1B-205ENST00000525945 ADAMTS12P58397 1594 aa14.84□□□□□ -0.03
GRAMD1B-205ENST00000525945 NUP160Q12769 1436 aa14.83□□□□□ -0.03
GRAMD1B-205ENST00000525945 CEP170Q5SW79 1584 aa14.83□□□□□ -0.04
GRAMD1B-205ENST00000525945 ERCC6L2Q5T890 1561 aa14.83□□□□□ -0.04
GRAMD1B-205ENST00000525945 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
GRAMD1B-205ENST00000525945 SHROOM2Q13796 1616 aa14.81□□□□□ -0.04
GRAMD1B-205ENST00000525945 FHAD1B1AJZ9 1412 aa14.79□□□□□ -0.04
GRAMD1B-205ENST00000525945 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.05
GRAMD1B-205ENST00000525945 TOP2BQ02880 1626 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms