RNA–Protein interactions for RNA: ENST00000525429.1

AP001007.2-201, humanhuman

TSL 3 BASIC

Gene AP001007.2, Length 593 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001007.2-201ENST00000525429 NISCHQ9Y2I1 1504 aa17.37■□□□□ 0.37
AP001007.2-201ENST00000525429 ABCC9O60706 1549 aa16.04■□□□□ 0.16
AP001007.2-201ENST00000525429 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
AP001007.2-201ENST00000525429 CCDC180Q9P1Z9 1646 aa15.7■□□□□ 0.1
AP001007.2-201ENST00000525429 CHIC1Q5VXU3 224 aa15.31■□□□□ 0.04
AP001007.2-201ENST00000525429 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
AP001007.2-201ENST00000525429 RB1CC1Q8TDY2 1594 aa15.15■□□□□ 0.02
AP001007.2-201ENST00000525429 NACADO15069 1562 aa14.94□□□□□ -0.02
AP001007.2-201ENST00000525429 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
AP001007.2-201ENST00000525429 DCAF8L2P0C7V8 631 aa14.78□□□□□ -0.04
AP001007.2-201ENST00000525429 UNC13AQ9UPW8 1703 aa14.72□□□□□ -0.05
AP001007.2-201ENST00000525429 BICRAQ9NZM4 1560 aa14.61□□□□□ -0.07
AP001007.2-201ENST00000525429 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
AP001007.2-201ENST00000525429 CECR2Q9BXF3 1484 aa14.51□□□□□ -0.09
AP001007.2-201ENST00000525429 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
AP001007.2-201ENST00000525429 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
AP001007.2-201ENST00000525429 DNAJC5Q9H3Z4 198 aa14.44□□□□□ -0.1
AP001007.2-201ENST00000525429 ZCCHC6Q5VYS8 1495 aaKnown RBP14.42□□□□□ -0.1
AP001007.2-201ENST00000525429 DCAF1Q9Y4B6 1507 aa14.38□□□□□ -0.11
AP001007.2-201ENST00000525429 EIF4G1Q04637 1599 aaKnown RBP14.34□□□□□ -0.11
AP001007.2-201ENST00000525429 SCRIBQ14160 1630 aa14.24□□□□□ -0.13
AP001007.2-201ENST00000525429 CUX2O14529 1486 aa14.05□□□□□ -0.16
AP001007.2-201ENST00000525429 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
AP001007.2-201ENST00000525429 NCAPD3P42695 1498 aa13.75□□□□□ -0.21
AP001007.2-201ENST00000525429 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
AP001007.2-201ENST00000525429 SMARCA2P51531 1590 aa13.65□□□□□ -0.22
AP001007.2-201ENST00000525429 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
AP001007.2-201ENST00000525429 ATAD2BQ9ULI0 1458 aa13.64□□□□□ -0.23
AP001007.2-201ENST00000525429 NESP48681 1621 aa13.62□□□□□ -0.23
AP001007.2-201ENST00000525429 THOC2Q8NI27 1593 aaKnown RBP13.6□□□□□ -0.23
AP001007.2-201ENST00000525429 LAMC3Q9Y6N6 1575 aa13.54□□□□□ -0.24
AP001007.2-201ENST00000525429 SMARCA4P51532 1647 aa13.54□□□□□ -0.24
AP001007.2-201ENST00000525429 BAZ1BQ9UIG0 1483 aaKnown RBP13.54□□□□□ -0.24
AP001007.2-201ENST00000525429 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
AP001007.2-201ENST00000525429 PHF23Q9BUL5 403 aaPredicted RBP13.51□□□□□ -0.25
AP001007.2-201ENST00000525429 KIF21AQ7Z4S6 1674 aa13.47□□□□□ -0.25
AP001007.2-201ENST00000525429 BAZ1AQ9NRL2 1556 aaPredicted RBP13.47□□□□□ -0.25
AP001007.2-201ENST00000525429 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
AP001007.2-201ENST00000525429 PEG3Q9GZU2 1588 aa13.41□□□□□ -0.26
AP001007.2-201ENST00000525429 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
AP001007.2-201ENST00000525429 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
AP001007.2-201ENST00000525429 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
AP001007.2-201ENST00000525429 WDR62O43379 1518 aa13.34□□□□□ -0.27
AP001007.2-201ENST00000525429 CADPSQ9ULU8 1353 aa13.32□□□□□ -0.28
AP001007.2-201ENST00000525429 CEP164Q9UPV0 1460 aa13.26□□□□□ -0.29
AP001007.2-201ENST00000525429 WIZO95785 1651 aa13.21□□□□□ -0.3
AP001007.2-201ENST00000525429 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
AP001007.2-201ENST00000525429 FANCD2Q9BXW9 1451 aa13.18□□□□□ -0.3
AP001007.2-201ENST00000525429 RIMBP3CA6NJZ7 1639 aa13.16□□□□□ -0.3
AP001007.2-201ENST00000525429 RIMBP3BA6NNM3 1639 aa13.16□□□□□ -0.3
AP001007.2-201ENST00000525429 RIMBP3Q9UFD9 1639 aa13.16□□□□□ -0.3
AP001007.2-201ENST00000525429 ARHGEF11O15085 1522 aa13.08□□□□□ -0.31
AP001007.2-201ENST00000525429 CFTRP13569 1480 aa13.08□□□□□ -0.32
AP001007.2-201ENST00000525429 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
AP001007.2-201ENST00000525429 TOP2AP11388 1531 aaKnown RBP13.06□□□□□ -0.32
AP001007.2-201ENST00000525429 URB2Q14146 1524 aaKnown RBP13.06□□□□□ -0.32
AP001007.2-201ENST00000525429 CYB5RLQ6IPT4 315 aa13.03□□□□□ -0.32
AP001007.2-201ENST00000525429 IFT140Q96RY7 1462 aa13.01□□□□□ -0.33
AP001007.2-201ENST00000525429 PRDM2Q13029 1718 aa12.96□□□□□ -0.33
AP001007.2-201ENST00000525429 ZNF608Q9ULD9 1512 aaPredicted RBP12.95□□□□□ -0.34
AP001007.2-201ENST00000525429 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
AP001007.2-201ENST00000525429 EIF4G3O43432 1585 aaKnown RBP12.91□□□□□ -0.34
AP001007.2-201ENST00000525429 ARAP1Q96P48 1450 aa12.91□□□□□ -0.34
AP001007.2-201ENST00000525429 ABCC8Q09428 1581 aa12.9□□□□□ -0.35
AP001007.2-201ENST00000525429 CHD1O14646 1710 aa12.89□□□□□ -0.35
AP001007.2-201ENST00000525429 FBLN2P98095 1184 aa12.88□□□□□ -0.35
AP001007.2-201ENST00000525429 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
AP001007.2-201ENST00000525429 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
AP001007.2-201ENST00000525429 AQRO60306 1485 aaKnown RBP eCLIP12.8□□□□□ -0.36
AP001007.2-201ENST00000525429 TARBP1Q13395 1621 aaKnown RBP12.77□□□□□ -0.36
AP001007.2-201ENST00000525429 SUPT5HO00267 1087 aaKnown RBP12.75□□□□□ -0.37
AP001007.2-201ENST00000525429 SYNJ1O43426 1573 aa12.74□□□□□ -0.37
AP001007.2-201ENST00000525429 CHMP7Q8WUX9 453 aaPredicted RBP12.72□□□□□ -0.37
AP001007.2-201ENST00000525429 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
AP001007.2-201ENST00000525429 CLASP1Q7Z460 1538 aa12.71□□□□□ -0.38
AP001007.2-201ENST00000525429 WDR97A6NE52 1622 aa12.7□□□□□ -0.38
AP001007.2-201ENST00000525429 SNAPC4Q5SXM2 1469 aa12.69□□□□□ -0.38
AP001007.2-201ENST00000525429 MAGI1Q96QZ7 1491 aaPredicted RBP12.67□□□□□ -0.38
AP001007.2-201ENST00000525429 SOGA1O94964 1423 aa12.67□□□□□ -0.38
AP001007.2-201ENST00000525429 TDRD9Q8NDG6 1382 aaKnown RBP12.67□□□□□ -0.38
AP001007.2-201ENST00000525429 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
AP001007.2-201ENST00000525429 GAPVD1Q14C86 1478 aa12.64□□□□□ -0.39
AP001007.2-201ENST00000525429 GRIN2BQ13224 1484 aa12.63□□□□□ -0.39
AP001007.2-201ENST00000525429 SYNJ2O15056 1496 aa12.62□□□□□ -0.39
AP001007.2-201ENST00000525429 FOXD1Q16676 465 aa12.6□□□□□ -0.39
AP001007.2-201ENST00000525429 FGD5Q6ZNL6 1462 aa12.58□□□□□ -0.4
AP001007.2-201ENST00000525429 CUX1P39880 1505 aa12.54□□□□□ -0.4
AP001007.2-201ENST00000525429 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
AP001007.2-201ENST00000525429 KIF13AQ9H1H9 1805 aa12.45□□□□□ -0.42
AP001007.2-201ENST00000525429 CEP170Q5SW79 1584 aa12.44□□□□□ -0.42
AP001007.2-201ENST00000525429 GRIN2AQ12879 1464 aa12.44□□□□□ -0.42
AP001007.2-201ENST00000525429 ABCA5Q8WWZ7 1642 aa12.44□□□□□ -0.42
AP001007.2-201ENST00000525429 ERCC6L2Q5T890 1561 aa12.43□□□□□ -0.42
AP001007.2-201ENST00000525429 WRNQ14191 1432 aaPredicted RBP eCLIP12.43□□□□□ -0.42
AP001007.2-201ENST00000525429 ABCA10Q8WWZ4 1543 aa12.42□□□□□ -0.42
AP001007.2-201ENST00000525429 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
AP001007.2-201ENST00000525429 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
AP001007.2-201ENST00000525429 NUP160Q12769 1436 aa12.39□□□□□ -0.43
AP001007.2-201ENST00000525429 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
AP001007.2-201ENST00000525429 SHROOM2Q13796 1616 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms