RNA–Protein interactions for RNA: ENST00000525337.1

AP000640.1-201, humanhuman

TSL 2 BASIC

Gene AP000640.1, Length 879 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000640.1-201ENST00000525337 AEBP2Q6ZN18 517 aaPredicted RBP34.65■■■■□ 3.14
AP000640.1-201ENST00000525337 CHIC1Q5VXU3 224 aa32.49■■■□□ 2.79
AP000640.1-201ENST00000525337 NISCHQ9Y2I1 1504 aa32.08■■■□□ 2.73
AP000640.1-201ENST00000525337 SENP3Q9H4L4 574 aaPredicted RBP29.78■■■□□ 2.36
AP000640.1-201ENST00000525337 PHF23Q9BUL5 403 aaPredicted RBP29.24■■■□□ 2.27
AP000640.1-201ENST00000525337 CCDC180Q9P1Z9 1646 aa28.83■■■□□ 2.21
AP000640.1-201ENST00000525337 ABCC9O60706 1549 aa28.71■■■□□ 2.19
AP000640.1-201ENST00000525337 FOXD1Q16676 465 aa27.79■■■□□ 2.04
AP000640.1-201ENST00000525337 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
AP000640.1-201ENST00000525337 NACADO15069 1562 aa27.19■■□□□ 1.94
AP000640.1-201ENST00000525337 POTEDQ86YR6 584 aa27.05■■□□□ 1.92
AP000640.1-201ENST00000525337 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
AP000640.1-201ENST00000525337 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
AP000640.1-201ENST00000525337 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
AP000640.1-201ENST00000525337 MYO15BQ96JP2 1530 aa26.82■■□□□ 1.88
AP000640.1-201ENST00000525337 PABPN1Q86U42 306 aaKnown RBP eCLIP26.69■■□□□ 1.86
AP000640.1-201ENST00000525337 ZCCHC6Q5VYS8 1495 aaKnown RBP26.62■■□□□ 1.85
AP000640.1-201ENST00000525337 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
AP000640.1-201ENST00000525337 DCAF1Q9Y4B6 1507 aa26.51■■□□□ 1.83
AP000640.1-201ENST00000525337 MSH5O43196 834 aa26.4■■□□□ 1.82
AP000640.1-201ENST00000525337 SCRIBQ14160 1630 aa26.25■■□□□ 1.79
AP000640.1-201ENST00000525337 SHROOM4Q9ULL8 1493 aa26.21■■□□□ 1.79
AP000640.1-201ENST00000525337 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
AP000640.1-201ENST00000525337 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
AP000640.1-201ENST00000525337 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
AP000640.1-201ENST00000525337 PIAS4Q8N2W9 510 aaPredicted RBP25.84■■□□□ 1.73
AP000640.1-201ENST00000525337 PLPPR3Q6T4P5 718 aa25.41■■□□□ 1.66
AP000640.1-201ENST00000525337 PPP6R1Q9UPN7 881 aa25.34■■□□□ 1.65
AP000640.1-201ENST00000525337 ADRA2BP18089 450 aa25.24■■□□□ 1.63
AP000640.1-201ENST00000525337 NCAPD3P42695 1498 aa25.08■■□□□ 1.6
AP000640.1-201ENST00000525337 SMARCA4P51532 1647 aa25.05■■□□□ 1.6
AP000640.1-201ENST00000525337 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
AP000640.1-201ENST00000525337 SMARCA2P51531 1590 aa24.96■■□□□ 1.59
AP000640.1-201ENST00000525337 HMGXB3Q12766 1538 aa24.93■■□□□ 1.58
AP000640.1-201ENST00000525337 BAZ1AQ9NRL2 1556 aaPredicted RBP24.9■■□□□ 1.58
AP000640.1-201ENST00000525337 PEG3Q9GZU2 1588 aa24.8■■□□□ 1.56
AP000640.1-201ENST00000525337 BAZ1BQ9UIG0 1483 aaKnown RBP24.78■■□□□ 1.56
AP000640.1-201ENST00000525337 ERCC6Q03468 1493 aa24.77■■□□□ 1.56
AP000640.1-201ENST00000525337 MROH2BQ7Z745 1585 aa24.73■■□□□ 1.55
AP000640.1-201ENST00000525337 CUX2O14529 1486 aa24.72■■□□□ 1.55
AP000640.1-201ENST00000525337 NESP48681 1621 aa24.69■■□□□ 1.54
AP000640.1-201ENST00000525337 DNAJC5Q9H3Z4 198 aa24.59■■□□□ 1.53
AP000640.1-201ENST00000525337 LAMC3Q9Y6N6 1575 aa24.53■■□□□ 1.52
AP000640.1-201ENST00000525337 THOC2Q8NI27 1593 aaKnown RBP24.48■■□□□ 1.51
AP000640.1-201ENST00000525337 WIZO95785 1651 aa24.46■■□□□ 1.51
AP000640.1-201ENST00000525337 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
AP000640.1-201ENST00000525337 PDS5BQ9NTI5 1447 aa24.34■■□□□ 1.49
AP000640.1-201ENST00000525337 CADPSQ9ULU8 1353 aa24.29■■□□□ 1.48
AP000640.1-201ENST00000525337 RSF1Q96T23 1441 aaPredicted RBP24.21■■□□□ 1.47
AP000640.1-201ENST00000525337 MRC2Q9UBG0 1479 aa24.16■■□□□ 1.46
AP000640.1-201ENST00000525337 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
AP000640.1-201ENST00000525337 WDR62O43379 1518 aa24.13■■□□□ 1.45
AP000640.1-201ENST00000525337 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
AP000640.1-201ENST00000525337 CFTRP13569 1480 aa24.06■■□□□ 1.44
AP000640.1-201ENST00000525337 FANCD2Q9BXW9 1451 aa24.05■■□□□ 1.44
AP000640.1-201ENST00000525337 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
AP000640.1-201ENST00000525337 URB2Q14146 1524 aaKnown RBP23.87■■□□□ 1.41
AP000640.1-201ENST00000525337 CCDC88BA6NC98 1476 aa23.84■■□□□ 1.41
AP000640.1-201ENST00000525337 TOPBP1Q92547 1522 aa23.62■■□□□ 1.37
AP000640.1-201ENST00000525337 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
AP000640.1-201ENST00000525337 ZNF608Q9ULD9 1512 aaPredicted RBP23.56■■□□□ 1.36
AP000640.1-201ENST00000525337 DNMBPQ6XZF7 1577 aa23.55■■□□□ 1.36
AP000640.1-201ENST00000525337 TRIM41Q8WV44 630 aa23.54■■□□□ 1.36
AP000640.1-201ENST00000525337 ABCC8Q09428 1581 aa23.53■■□□□ 1.36
AP000640.1-201ENST00000525337 OSCARQ8IYS5 282 aa23.52■■□□□ 1.36
AP000640.1-201ENST00000525337 EIF4G3O43432 1585 aaKnown RBP23.47■■□□□ 1.35
AP000640.1-201ENST00000525337 DMRT2Q9Y5R5 561 aa23.46■■□□□ 1.35
AP000640.1-201ENST00000525337 TARBP1Q13395 1621 aaKnown RBP23.43■■□□□ 1.34
AP000640.1-201ENST00000525337 MAPK8IP2Q13387 824 aaPredicted RBP23.41■■□□□ 1.34
AP000640.1-201ENST00000525337 POLA1P09884 1462 aaPredicted RBP23.37■■□□□ 1.33
AP000640.1-201ENST00000525337 AQRO60306 1485 aaKnown RBP eCLIP23.33■■□□□ 1.33
AP000640.1-201ENST00000525337 RIMBP3CA6NJZ7 1639 aa23.33■■□□□ 1.32
AP000640.1-201ENST00000525337 RIMBP3BA6NNM3 1639 aa23.33■■□□□ 1.32
AP000640.1-201ENST00000525337 RIMBP3Q9UFD9 1639 aa23.33■■□□□ 1.32
AP000640.1-201ENST00000525337 CHD1O14646 1710 aa23.31■■□□□ 1.32
AP000640.1-201ENST00000525337 RAD54L2Q9Y4B4 1467 aa23.28■■□□□ 1.32
AP000640.1-201ENST00000525337 CUX1P39880 1505 aa23.24■■□□□ 1.31
AP000640.1-201ENST00000525337 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
AP000640.1-201ENST00000525337 ARHGEF11O15085 1522 aa23.23■■□□□ 1.31
AP000640.1-201ENST00000525337 SOGA1O94964 1423 aa23.23■■□□□ 1.31
AP000640.1-201ENST00000525337 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
AP000640.1-201ENST00000525337 WDR97A6NE52 1622 aa23.19■■□□□ 1.3
AP000640.1-201ENST00000525337 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
AP000640.1-201ENST00000525337 CACNB1Q02641 598 aaPredicted RBP23.14■■□□□ 1.29
AP000640.1-201ENST00000525337 SNAPC4Q5SXM2 1469 aa23.12■■□□□ 1.29
AP000640.1-201ENST00000525337 SUPT5HO00267 1087 aaKnown RBP23.12■■□□□ 1.29
AP000640.1-201ENST00000525337 FBLN2P98095 1184 aa23.11■■□□□ 1.29
AP000640.1-201ENST00000525337 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
AP000640.1-201ENST00000525337 PBRM1Q86U86 1689 aa23.04■■□□□ 1.28
AP000640.1-201ENST00000525337 GRIN2BQ13224 1484 aa23.04■■□□□ 1.28
AP000640.1-201ENST00000525337 ARAP1Q96P48 1450 aa23.02■■□□□ 1.28
AP000640.1-201ENST00000525337 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
AP000640.1-201ENST00000525337 ABCA5Q8WWZ7 1642 aa22.98■■□□□ 1.27
AP000640.1-201ENST00000525337 CYB5RLQ6IPT4 315 aa22.98■■□□□ 1.27
AP000640.1-201ENST00000525337 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
AP000640.1-201ENST00000525337 SYNJ2O15056 1496 aa22.97■■□□□ 1.27
AP000640.1-201ENST00000525337 GAPVD1Q14C86 1478 aa22.97■■□□□ 1.27
AP000640.1-201ENST00000525337 ABCA10Q8WWZ4 1543 aa22.97■■□□□ 1.27
AP000640.1-201ENST00000525337 CHMP7Q8WUX9 453 aaPredicted RBP22.94■■□□□ 1.26
AP000640.1-201ENST00000525337 BIVM-ERCC5R4GMW8 1640 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms