RNA–Protein interactions for RNA: ENST00000525291.5

SDHD-202, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-202ENST00000525291 NISCHQ9Y2I1 1504 aa36.28■■■■□ 3.4
SDHD-202ENST00000525291 CCDC180Q9P1Z9 1646 aa32.57■■■□□ 2.8
SDHD-202ENST00000525291 ABCC9O60706 1549 aa32.23■■■□□ 2.75
SDHD-202ENST00000525291 RB1CC1Q8TDY2 1594 aa30.79■■■□□ 2.52
SDHD-202ENST00000525291 NACADO15069 1562 aa30.62■■■□□ 2.49
SDHD-202ENST00000525291 AEBP2Q6ZN18 517 aaPredicted RBP30.57■■■□□ 2.48
SDHD-202ENST00000525291 DCAF8L2P0C7V8 631 aa30.38■■■□□ 2.45
SDHD-202ENST00000525291 UNC13AQ9UPW8 1703 aa30.34■■■□□ 2.45
SDHD-202ENST00000525291 MYO15BQ96JP2 1530 aa30.22■■■□□ 2.43
SDHD-202ENST00000525291 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
SDHD-202ENST00000525291 DCAF1Q9Y4B6 1507 aa29.96■■■□□ 2.39
SDHD-202ENST00000525291 PABPN1Q86U42 306 aaKnown RBP eCLIP29.95■■■□□ 2.39
SDHD-202ENST00000525291 BICRAQ9NZM4 1560 aa29.94■■■□□ 2.38
SDHD-202ENST00000525291 DNAJC5BQ9UF47 199 aa29.93■■■□□ 2.38
SDHD-202ENST00000525291 SCRIBQ14160 1630 aa29.69■■■□□ 2.34
SDHD-202ENST00000525291 SHROOM4Q9ULL8 1493 aa29.44■■■□□ 2.3
SDHD-202ENST00000525291 CC2D2AQ9P2K1 1620 aa29.18■■■□□ 2.26
SDHD-202ENST00000525291 EIF4G1Q04637 1599 aaKnown RBP29.15■■■□□ 2.26
SDHD-202ENST00000525291 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
SDHD-202ENST00000525291 CHIC1Q5VXU3 224 aa28.78■■■□□ 2.2
SDHD-202ENST00000525291 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
SDHD-202ENST00000525291 NCAPD3P42695 1498 aa28.2■■■□□ 2.1
SDHD-202ENST00000525291 ATAD2BQ9ULI0 1458 aa28.19■■■□□ 2.1
SDHD-202ENST00000525291 BAZ1AQ9NRL2 1556 aaPredicted RBP28.16■■■□□ 2.1
SDHD-202ENST00000525291 SMARCA2P51531 1590 aa28.15■■■□□ 2.1
SDHD-202ENST00000525291 HMGXB3Q12766 1538 aa28.11■■■□□ 2.09
SDHD-202ENST00000525291 PEG3Q9GZU2 1588 aa28■■■□□ 2.07
SDHD-202ENST00000525291 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
SDHD-202ENST00000525291 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.06
SDHD-202ENST00000525291 NESP48681 1621 aa27.78■■■□□ 2.04
SDHD-202ENST00000525291 ERCC6Q03468 1493 aa27.76■■■□□ 2.04
SDHD-202ENST00000525291 WIZO95785 1651 aa27.75■■■□□ 2.03
SDHD-202ENST00000525291 CUX2O14529 1486 aa27.63■■■□□ 2.01
SDHD-202ENST00000525291 LAMC3Q9Y6N6 1575 aa27.61■■■□□ 2.01
SDHD-202ENST00000525291 KIF21AQ7Z4S6 1674 aa27.57■■■□□ 2
SDHD-202ENST00000525291 THOC2Q8NI27 1593 aaKnown RBP27.53■■■□□ 2
SDHD-202ENST00000525291 RSF1Q96T23 1441 aaPredicted RBP27.42■■□□□ 1.98
SDHD-202ENST00000525291 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
SDHD-202ENST00000525291 CADPSQ9ULU8 1353 aa27.33■■□□□ 1.97
SDHD-202ENST00000525291 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.96
SDHD-202ENST00000525291 DNAJC5Q9H3Z4 198 aa27.23■■□□□ 1.95
SDHD-202ENST00000525291 MRC2Q9UBG0 1479 aa27.17■■□□□ 1.94
SDHD-202ENST00000525291 PRDM2Q13029 1718 aa27.14■■□□□ 1.94
SDHD-202ENST00000525291 WDR62O43379 1518 aa27.13■■□□□ 1.93
SDHD-202ENST00000525291 CFTRP13569 1480 aa27.12■■□□□ 1.93
SDHD-202ENST00000525291 CEP164Q9UPV0 1460 aa27.11■■□□□ 1.93
SDHD-202ENST00000525291 FANCD2Q9BXW9 1451 aa27.09■■□□□ 1.93
SDHD-202ENST00000525291 CCDC88BA6NC98 1476 aa26.97■■□□□ 1.91
SDHD-202ENST00000525291 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
SDHD-202ENST00000525291 TOPBP1Q92547 1522 aa26.65■■□□□ 1.86
SDHD-202ENST00000525291 DNMBPQ6XZF7 1577 aa26.58■■□□□ 1.85
SDHD-202ENST00000525291 IFT140Q96RY7 1462 aa26.52■■□□□ 1.84
SDHD-202ENST00000525291 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
SDHD-202ENST00000525291 ABCC8Q09428 1581 aa26.5■■□□□ 1.83
SDHD-202ENST00000525291 EIF4G3O43432 1585 aaKnown RBP26.47■■□□□ 1.83
SDHD-202ENST00000525291 TARBP1Q13395 1621 aaKnown RBP26.43■■□□□ 1.82
SDHD-202ENST00000525291 POLA1P09884 1462 aaPredicted RBP26.37■■□□□ 1.81
SDHD-202ENST00000525291 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
SDHD-202ENST00000525291 CHD1O14646 1710 aa26.31■■□□□ 1.8
SDHD-202ENST00000525291 CUX1P39880 1505 aa26.29■■□□□ 1.8
SDHD-202ENST00000525291 OSCARQ8IYS5 282 aa26.28■■□□□ 1.8
SDHD-202ENST00000525291 RAD54L2Q9Y4B4 1467 aa26.27■■□□□ 1.8
SDHD-202ENST00000525291 FGD5Q6ZNL6 1462 aa26.26■■□□□ 1.79
SDHD-202ENST00000525291 AQRO60306 1485 aaKnown RBP eCLIP26.25■■□□□ 1.797e-7■■□□□ 14.1
SDHD-202ENST00000525291 WDR97A6NE52 1622 aa26.21■■□□□ 1.79
SDHD-202ENST00000525291 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
SDHD-202ENST00000525291 SOGA1O94964 1423 aa26.18■■□□□ 1.78
SDHD-202ENST00000525291 RIMBP3CA6NJZ7 1639 aa26.16■■□□□ 1.78
SDHD-202ENST00000525291 RIMBP3BA6NNM3 1639 aa26.16■■□□□ 1.78
SDHD-202ENST00000525291 RIMBP3Q9UFD9 1639 aa26.16■■□□□ 1.78
SDHD-202ENST00000525291 TDRD9Q8NDG6 1382 aaKnown RBP26.11■■□□□ 1.77
SDHD-202ENST00000525291 SENP3Q9H4L4 574 aaPredicted RBP26.1■■□□□ 1.77
SDHD-202ENST00000525291 PBRM1Q86U86 1689 aa26.09■■□□□ 1.77
SDHD-202ENST00000525291 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
SDHD-202ENST00000525291 ARHGEF11O15085 1522 aa26.04■■□□□ 1.76
SDHD-202ENST00000525291 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
SDHD-202ENST00000525291 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
SDHD-202ENST00000525291 SYNJ1O43426 1573 aa25.96■■□□□ 1.75
SDHD-202ENST00000525291 FBLN2P98095 1184 aa25.96■■□□□ 1.75
SDHD-202ENST00000525291 GRIN2BQ13224 1484 aa25.96■■□□□ 1.75
SDHD-202ENST00000525291 MAGI1Q96QZ7 1491 aaPredicted RBP25.95■■□□□ 1.74
SDHD-202ENST00000525291 TOP2BQ02880 1626 aa25.95■■□□□ 1.74
SDHD-202ENST00000525291 ABCA10Q8WWZ4 1543 aa25.94■■□□□ 1.74
SDHD-202ENST00000525291 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
SDHD-202ENST00000525291 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
SDHD-202ENST00000525291 WRNQ14191 1432 aaPredicted RBP eCLIP25.88■■□□□ 1.73
SDHD-202ENST00000525291 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
SDHD-202ENST00000525291 ARAP1Q96P48 1450 aa25.81■■□□□ 1.72
SDHD-202ENST00000525291 CHMP7Q8WUX9 453 aaPredicted RBP25.78■■□□□ 1.72
SDHD-202ENST00000525291 ADAMTS12P58397 1594 aa25.77■■□□□ 1.72
SDHD-202ENST00000525291 PHF23Q9BUL5 403 aaPredicted RBP25.74■■□□□ 1.71
SDHD-202ENST00000525291 CYB5RLQ6IPT4 315 aa25.69■■□□□ 1.7
SDHD-202ENST00000525291 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
SDHD-202ENST00000525291 CEP170Q5SW79 1584 aa25.64■■□□□ 1.69
SDHD-202ENST00000525291 ERICH3Q5RHP9 1530 aa25.63■■□□□ 1.69
SDHD-202ENST00000525291 FHAD1B1AJZ9 1412 aa25.56■■□□□ 1.68
SDHD-202ENST00000525291 NUP160Q12769 1436 aa25.54■■□□□ 1.68
SDHD-202ENST00000525291 ERCC6L2Q5T890 1561 aa25.54■■□□□ 1.68
SDHD-202ENST00000525291 SHROOM2Q13796 1616 aa25.51■■□□□ 1.67
SDHD-202ENST00000525291 RUSC2Q8N2Y8 1516 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms