RNA–Protein interactions for RNA: ENST00000524536.5

USP33-211, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-211ENST00000524536 NISCHQ9Y2I1 1504 aa32.44■■■□□ 2.78
USP33-211ENST00000524536 ABCC9O60706 1549 aa30.29■■■□□ 2.44
USP33-211ENST00000524536 CCDC180Q9P1Z9 1646 aa29.39■■■□□ 2.3
USP33-211ENST00000524536 DNAJC5BQ9UF47 199 aa29.21■■■□□ 2.27
USP33-211ENST00000524536 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
USP33-211ENST00000524536 RB1CC1Q8TDY2 1594 aa28.48■■■□□ 2.15
USP33-211ENST00000524536 PABPN1Q86U42 306 aaKnown RBP eCLIP28.15■■■□□ 2.1
USP33-211ENST00000524536 NACADO15069 1562 aa28.1■■■□□ 2.09
USP33-211ENST00000524536 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
USP33-211ENST00000524536 UNC13AQ9UPW8 1703 aa27.59■■■□□ 2.01
USP33-211ENST00000524536 BICRAQ9NZM4 1560 aa27.58■■■□□ 2.01
USP33-211ENST00000524536 DNAJC5Q9H3Z4 198 aa27.56■■■□□ 2
USP33-211ENST00000524536 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
USP33-211ENST00000524536 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
USP33-211ENST00000524536 CECR2Q9BXF3 1484 aa27.42■■□□□ 1.98
USP33-211ENST00000524536 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
USP33-211ENST00000524536 SHROOM4Q9ULL8 1493 aa27.27■■□□□ 1.96
USP33-211ENST00000524536 EIF4G1Q04637 1599 aaKnown RBP27.03■■□□□ 1.92
USP33-211ENST00000524536 DCAF1Q9Y4B6 1507 aa26.78■■□□□ 1.88
USP33-211ENST00000524536 SCRIBQ14160 1630 aa26.71■■□□□ 1.87
USP33-211ENST00000524536 ZCCHC6Q5VYS8 1495 aaKnown RBP26.67■■□□□ 1.86
USP33-211ENST00000524536 CUX2O14529 1486 aa26.52■■□□□ 1.84
USP33-211ENST00000524536 ERCC6Q03468 1493 aa26.28■■□□□ 1.8
USP33-211ENST00000524536 NCAPD3P42695 1498 aa26■■□□□ 1.75
USP33-211ENST00000524536 TRIM41Q8WV44 630 aa25.96■■□□□ 1.75
USP33-211ENST00000524536 ATAD2BQ9ULI0 1458 aa25.75■■□□□ 1.71
USP33-211ENST00000524536 NESP48681 1621 aa25.74■■□□□ 1.71
USP33-211ENST00000524536 HMGXB3Q12766 1538 aa25.64■■□□□ 1.7
USP33-211ENST00000524536 SMARCA2P51531 1590 aa25.63■■□□□ 1.69
USP33-211ENST00000524536 THOC2Q8NI27 1593 aaKnown RBP25.58■■□□□ 1.69
USP33-211ENST00000524536 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
USP33-211ENST00000524536 PDS5BQ9NTI5 1447 aa25.47■■□□□ 1.67
USP33-211ENST00000524536 BAZ1BQ9UIG0 1483 aaKnown RBP25.46■■□□□ 1.67
USP33-211ENST00000524536 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
USP33-211ENST00000524536 OSCARQ8IYS5 282 aa25.3■■□□□ 1.64
USP33-211ENST00000524536 KIF21AQ7Z4S6 1674 aa25.27■■□□□ 1.64
USP33-211ENST00000524536 BAZ1AQ9NRL2 1556 aaPredicted RBP25.25■■□□□ 1.63
USP33-211ENST00000524536 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
USP33-211ENST00000524536 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
USP33-211ENST00000524536 CADPSQ9ULU8 1353 aa25.19■■□□□ 1.62
USP33-211ENST00000524536 WDR62O43379 1518 aa25.12■■□□□ 1.61
USP33-211ENST00000524536 CEP164Q9UPV0 1460 aa24.95■■□□□ 1.58
USP33-211ENST00000524536 MROH2BQ7Z745 1585 aa24.94■■□□□ 1.58
USP33-211ENST00000524536 FANCD2Q9BXW9 1451 aa24.84■■□□□ 1.57
USP33-211ENST00000524536 RIMBP3CA6NJZ7 1639 aa24.81■■□□□ 1.56
USP33-211ENST00000524536 RIMBP3BA6NNM3 1639 aa24.81■■□□□ 1.56
USP33-211ENST00000524536 RIMBP3Q9UFD9 1639 aa24.81■■□□□ 1.56
USP33-211ENST00000524536 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
USP33-211ENST00000524536 CYB5RLQ6IPT4 315 aa24.72■■□□□ 1.55
USP33-211ENST00000524536 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
USP33-211ENST00000524536 CFTRP13569 1480 aa24.68■■□□□ 1.54
USP33-211ENST00000524536 URB2Q14146 1524 aaKnown RBP24.63■■□□□ 1.53
USP33-211ENST00000524536 WIZO95785 1651 aa24.55■■□□□ 1.52
USP33-211ENST00000524536 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
USP33-211ENST00000524536 ZNF608Q9ULD9 1512 aaPredicted RBP24.47■■□□□ 1.51
USP33-211ENST00000524536 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
USP33-211ENST00000524536 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
USP33-211ENST00000524536 FBLN2P98095 1184 aa24.32■■□□□ 1.48
USP33-211ENST00000524536 SENP3Q9H4L4 574 aaPredicted RBP24.3■■□□□ 1.48
USP33-211ENST00000524536 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
USP33-211ENST00000524536 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
USP33-211ENST00000524536 TOP2AP11388 1531 aaKnown RBP24.24■■□□□ 1.47
USP33-211ENST00000524536 EIF4G3O43432 1585 aaKnown RBP24.23■■□□□ 1.47
USP33-211ENST00000524536 AQRO60306 1485 aaKnown RBP eCLIP24.2■■□□□ 1.476e-7■■□□□ 11.9
USP33-211ENST00000524536 CHD1O14646 1710 aa24.15■■□□□ 1.46
USP33-211ENST00000524536 PRDM2Q13029 1718 aa24.13■■□□□ 1.45
USP33-211ENST00000524536 PHF23Q9BUL5 403 aaPredicted RBP24.1■■□□□ 1.45
USP33-211ENST00000524536 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
USP33-211ENST00000524536 CHMP7Q8WUX9 453 aaPredicted RBP24.03■■□□□ 1.44
USP33-211ENST00000524536 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
USP33-211ENST00000524536 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
USP33-211ENST00000524536 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
USP33-211ENST00000524536 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
USP33-211ENST00000524536 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
USP33-211ENST00000524536 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
USP33-211ENST00000524536 SOGA1O94964 1423 aa23.92■■□□□ 1.42
USP33-211ENST00000524536 SNAPC4Q5SXM2 1469 aa23.89■■□□□ 1.42
USP33-211ENST00000524536 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
USP33-211ENST00000524536 GAPVD1Q14C86 1478 aa23.85■■□□□ 1.41
USP33-211ENST00000524536 MAGI1Q96QZ7 1491 aaPredicted RBP23.84■■□□□ 1.41
USP33-211ENST00000524536 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
USP33-211ENST00000524536 SYNJ2O15056 1496 aa23.78■■□□□ 1.4
USP33-211ENST00000524536 GRIN2BQ13224 1484 aa23.77■■□□□ 1.4
USP33-211ENST00000524536 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
USP33-211ENST00000524536 ILDR1Q86SU0 546 aaPredicted RBP23.63■■□□□ 1.37
USP33-211ENST00000524536 CUX1P39880 1505 aa23.48■■□□□ 1.35
USP33-211ENST00000524536 ERCC6L2Q5T890 1561 aa23.47■■□□□ 1.35
USP33-211ENST00000524536 KDM4FA0A1W2PPD8 638 aa23.45■■□□□ 1.34
USP33-211ENST00000524536 FAM69CQ0P6D2 419 aa23.45■■□□□ 1.34
USP33-211ENST00000524536 PBRM1Q86U86 1689 aa23.42■■□□□ 1.34
USP33-211ENST00000524536 GRIN2AQ12879 1464 aa23.42■■□□□ 1.34
USP33-211ENST00000524536 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
USP33-211ENST00000524536 NPM1P06748 294 aaKnown RBP eCLIP23.41■■□□□ 1.34
USP33-211ENST00000524536 NUP160Q12769 1436 aa23.39■■□□□ 1.33
USP33-211ENST00000524536 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
USP33-211ENST00000524536 KIF13AQ9H1H9 1805 aa23.37■■□□□ 1.33
USP33-211ENST00000524536 ABCC10Q5T3U5 1492 aa23.34■■□□□ 1.33
USP33-211ENST00000524536 ABCA5Q8WWZ7 1642 aa23.32■■□□□ 1.32
USP33-211ENST00000524536 SHROOM2Q13796 1616 aa23.29■■□□□ 1.32
USP33-211ENST00000524536 JPH4Q96JJ6 628 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms