RNA–Protein interactions for RNA: ENST00000524430.1

XRRA1-204, Transcript of X-ray radiation resistance associated 1, humanhuman

TSL 4

Gene XRRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRRA1-204ENST00000524430 NISCHQ9Y2I1 1504 aa36.16■■■■□ 3.38
XRRA1-204ENST00000524430 ABCC9O60706 1549 aa32.98■■■□□ 2.87
XRRA1-204ENST00000524430 CCDC180Q9P1Z9 1646 aa32.66■■■□□ 2.82
XRRA1-204ENST00000524430 AEBP2Q6ZN18 517 aaPredicted RBP31.28■■■□□ 2.6
XRRA1-204ENST00000524430 DNAJC5BQ9UF47 199 aa31.21■■■□□ 2.59
XRRA1-204ENST00000524430 RB1CC1Q8TDY2 1594 aa31.19■■■□□ 2.58
XRRA1-204ENST00000524430 NACADO15069 1562 aa30.85■■■□□ 2.53
XRRA1-204ENST00000524430 UNC13AQ9UPW8 1703 aa30.73■■■□□ 2.51
XRRA1-204ENST00000524430 PABPN1Q86U42 306 aaKnown RBP eCLIP30.59■■■□□ 2.49
XRRA1-204ENST00000524430 DCAF8L2P0C7V8 631 aa30.57■■■□□ 2.48
XRRA1-204ENST00000524430 BICRAQ9NZM4 1560 aa30.41■■■□□ 2.46
XRRA1-204ENST00000524430 CHIC1Q5VXU3 224 aa30.4■■■□□ 2.46
XRRA1-204ENST00000524430 MYO15BQ96JP2 1530 aa30.26■■■□□ 2.43
XRRA1-204ENST00000524430 ZCCHC6Q5VYS8 1495 aaKnown RBP29.93■■■□□ 2.38
XRRA1-204ENST00000524430 SCRIBQ14160 1630 aa29.81■■■□□ 2.36
XRRA1-204ENST00000524430 CC2D2AQ9P2K1 1620 aa29.81■■■□□ 2.36
XRRA1-204ENST00000524430 DCAF1Q9Y4B6 1507 aa29.78■■■□□ 2.36
XRRA1-204ENST00000524430 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
XRRA1-204ENST00000524430 CECR2Q9BXF3 1484 aa29.69■■■□□ 2.34
XRRA1-204ENST00000524430 EIF4G1Q04637 1599 aaKnown RBP29.64■■■□□ 2.34
XRRA1-204ENST00000524430 DNAJC5Q9H3Z4 198 aa28.78■■■□□ 2.2
XRRA1-204ENST00000524430 CUX2O14529 1486 aa28.47■■■□□ 2.15
XRRA1-204ENST00000524430 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
XRRA1-204ENST00000524430 ERCC6Q03468 1493 aa28.43■■■□□ 2.14
XRRA1-204ENST00000524430 ATAD2BQ9ULI0 1458 aa28.38■■■□□ 2.13
XRRA1-204ENST00000524430 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
XRRA1-204ENST00000524430 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
XRRA1-204ENST00000524430 NESP48681 1621 aa28.29■■■□□ 2.12
XRRA1-204ENST00000524430 SMARCA2P51531 1590 aa28.26■■■□□ 2.11
XRRA1-204ENST00000524430 THOC2Q8NI27 1593 aaKnown RBP28.11■■■□□ 2.09
XRRA1-204ENST00000524430 BAZ1BQ9UIG0 1483 aaKnown RBP28.09■■■□□ 2.09
XRRA1-204ENST00000524430 BAZ1AQ9NRL2 1556 aaPredicted RBP28.07■■■□□ 2.08
XRRA1-204ENST00000524430 PEG3Q9GZU2 1588 aa28.02■■■□□ 2.08
XRRA1-204ENST00000524430 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
XRRA1-204ENST00000524430 LAMC3Q9Y6N6 1575 aa27.94■■■□□ 2.06
XRRA1-204ENST00000524430 MROH2BQ7Z745 1585 aa27.92■■■□□ 2.06
XRRA1-204ENST00000524430 PDS5BQ9NTI5 1447 aa27.68■■■□□ 2.02
XRRA1-204ENST00000524430 WIZO95785 1651 aa27.63■■■□□ 2.01
XRRA1-204ENST00000524430 MRC2Q9UBG0 1479 aa27.57■■■□□ 2
XRRA1-204ENST00000524430 CADPSQ9ULU8 1353 aa27.56■■■□□ 2
XRRA1-204ENST00000524430 WDR62O43379 1518 aa27.56■■■□□ 2
XRRA1-204ENST00000524430 TRIM41Q8WV44 630 aa27.47■■□□□ 1.99
XRRA1-204ENST00000524430 CEP164Q9UPV0 1460 aa27.38■■□□□ 1.97
XRRA1-204ENST00000524430 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
XRRA1-204ENST00000524430 CFTRP13569 1480 aa27.22■■□□□ 1.95
XRRA1-204ENST00000524430 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
XRRA1-204ENST00000524430 TOP2AP11388 1531 aaKnown RBP27.17■■□□□ 1.94
XRRA1-204ENST00000524430 RSF1Q96T23 1441 aaPredicted RBP27.14■■□□□ 1.93
XRRA1-204ENST00000524430 PRDM2Q13029 1718 aa27.12■■□□□ 1.93
XRRA1-204ENST00000524430 OSCARQ8IYS5 282 aa27■■□□□ 1.91
XRRA1-204ENST00000524430 RIMBP3CA6NJZ7 1639 aa26.95■■□□□ 1.91
XRRA1-204ENST00000524430 RIMBP3BA6NNM3 1639 aa26.95■■□□□ 1.91
XRRA1-204ENST00000524430 RIMBP3Q9UFD9 1639 aa26.95■■□□□ 1.91
XRRA1-204ENST00000524430 ZNF608Q9ULD9 1512 aaPredicted RBP26.91■■□□□ 1.9
XRRA1-204ENST00000524430 CCDC88BA6NC98 1476 aa26.83■■□□□ 1.89
XRRA1-204ENST00000524430 PHF23Q9BUL5 403 aaPredicted RBP26.82■■□□□ 1.88
XRRA1-204ENST00000524430 IFT140Q96RY7 1462 aa26.81■■□□□ 1.88
XRRA1-204ENST00000524430 EIF4G3O43432 1585 aaKnown RBP26.8■■□□□ 1.88
XRRA1-204ENST00000524430 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
XRRA1-204ENST00000524430 ARHGEF11O15085 1522 aa26.77■■□□□ 1.88
XRRA1-204ENST00000524430 CHD1O14646 1710 aa26.72■■□□□ 1.87
XRRA1-204ENST00000524430 DNMBPQ6XZF7 1577 aa26.68■■□□□ 1.86
XRRA1-204ENST00000524430 TARBP1Q13395 1621 aaKnown RBP26.64■■□□□ 1.85
XRRA1-204ENST00000524430 AQRO60306 1485 aaKnown RBP eCLIP26.57■■□□□ 1.84
XRRA1-204ENST00000524430 ABCC8Q09428 1581 aa26.57■■□□□ 1.84
XRRA1-204ENST00000524430 POLA1P09884 1462 aaPredicted RBP26.5■■□□□ 1.83
XRRA1-204ENST00000524430 ARAP1Q96P48 1450 aa26.5■■□□□ 1.83
XRRA1-204ENST00000524430 CYB5RLQ6IPT4 315 aa26.47■■□□□ 1.83
XRRA1-204ENST00000524430 RAD54L2Q9Y4B4 1467 aa26.44■■□□□ 1.82
XRRA1-204ENST00000524430 FBLN2P98095 1184 aa26.38■■□□□ 1.81
XRRA1-204ENST00000524430 SENP3Q9H4L4 574 aaPredicted RBP26.37■■□□□ 1.81
XRRA1-204ENST00000524430 SNAPC4Q5SXM2 1469 aa26.33■■□□□ 1.81
XRRA1-204ENST00000524430 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.8
XRRA1-204ENST00000524430 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
XRRA1-204ENST00000524430 CLASP1Q7Z460 1538 aa26.3■■□□□ 1.8
XRRA1-204ENST00000524430 SOGA1O94964 1423 aa26.28■■□□□ 1.8
XRRA1-204ENST00000524430 TRHP20396 242 aaPredicted RBP26.27■■□□□ 1.8
XRRA1-204ENST00000524430 WDR97A6NE52 1622 aa26.25■■□□□ 1.79
XRRA1-204ENST00000524430 CUX1P39880 1505 aa26.25■■□□□ 1.79
XRRA1-204ENST00000524430 SYNJ1O43426 1573 aa26.2■■□□□ 1.78
XRRA1-204ENST00000524430 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
XRRA1-204ENST00000524430 MAGI1Q96QZ7 1491 aaPredicted RBP26.16■■□□□ 1.78
XRRA1-204ENST00000524430 GRIN2BQ13224 1484 aa26.11■■□□□ 1.77
XRRA1-204ENST00000524430 SYNJ2O15056 1496 aa26.1■■□□□ 1.77
XRRA1-204ENST00000524430 CHMP7Q8WUX9 453 aaPredicted RBP26.08■■□□□ 1.77
XRRA1-204ENST00000524430 ABCA5Q8WWZ7 1642 aa26.03■■□□□ 1.76
XRRA1-204ENST00000524430 GAPVD1Q14C86 1478 aa26■■□□□ 1.75
XRRA1-204ENST00000524430 SUPT5HO00267 1087 aaKnown RBP26■■□□□ 1.75
XRRA1-204ENST00000524430 ERCC6L2Q5T890 1561 aa25.95■■□□□ 1.74
XRRA1-204ENST00000524430 ABCA10Q8WWZ4 1543 aa25.93■■□□□ 1.74
XRRA1-204ENST00000524430 ADAMTS12P58397 1594 aa25.86■■□□□ 1.73
XRRA1-204ENST00000524430 CEP170Q5SW79 1584 aa25.85■■□□□ 1.73
XRRA1-204ENST00000524430 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
XRRA1-204ENST00000524430 BIVM-ERCC5R4GMW8 1640 aa25.77■■□□□ 1.72
XRRA1-204ENST00000524430 SHROOM2Q13796 1616 aa25.75■■□□□ 1.71
XRRA1-204ENST00000524430 NUP160Q12769 1436 aa25.74■■□□□ 1.71
XRRA1-204ENST00000524430 TOP2BQ02880 1626 aa25.72■■□□□ 1.71
XRRA1-204ENST00000524430 KIF13AQ9H1H9 1805 aa25.69■■□□□ 1.7
XRRA1-204ENST00000524430 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
XRRA1-204ENST00000524430 FHAD1B1AJZ9 1412 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms