RNA–Protein interactions for RNA: ENST00000523466.5

GM2A-203, Transcript of GM2 ganglioside activator, humanhuman

TSL 3

Gene GM2A, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-203ENST00000523466 NISCHQ9Y2I1 1504 aa19.88■□□□□ 0.77
GM2A-203ENST00000523466 ABCC9O60706 1549 aa17.9■□□□□ 0.46
GM2A-203ENST00000523466 CCDC180Q9P1Z9 1646 aa17.86■□□□□ 0.45
GM2A-203ENST00000523466 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
GM2A-203ENST00000523466 NACADO15069 1562 aa16.91■□□□□ 0.3
GM2A-203ENST00000523466 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
GM2A-203ENST00000523466 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
GM2A-203ENST00000523466 DCAF8L2P0C7V8 631 aa16.77■□□□□ 0.28
GM2A-203ENST00000523466 MYO15BQ96JP2 1530 aa16.68■□□□□ 0.26
GM2A-203ENST00000523466 PABPN1Q86U42 306 aaKnown RBP eCLIP16.66■□□□□ 0.26
GM2A-203ENST00000523466 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
GM2A-203ENST00000523466 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
GM2A-203ENST00000523466 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.23
GM2A-203ENST00000523466 DCAF1Q9Y4B6 1507 aa16.44■□□□□ 0.22
GM2A-203ENST00000523466 CHIC1Q5VXU3 224 aa16.36■□□□□ 0.21
GM2A-203ENST00000523466 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
GM2A-203ENST00000523466 SCRIBQ14160 1630 aa16.24■□□□□ 0.19
GM2A-203ENST00000523466 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
GM2A-203ENST00000523466 CECR2Q9BXF3 1484 aa16.14■□□□□ 0.17
GM2A-203ENST00000523466 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
GM2A-203ENST00000523466 NCAPD3P42695 1498 aa15.62■□□□□ 0.09
GM2A-203ENST00000523466 ATAD2BQ9ULI0 1458 aa15.55■□□□□ 0.08
GM2A-203ENST00000523466 DNAJC5Q9H3Z4 198 aa15.54■□□□□ 0.08
GM2A-203ENST00000523466 SMARCA4P51532 1647 aa15.51■□□□□ 0.07
GM2A-203ENST00000523466 SMARCA2P51531 1590 aa15.5■□□□□ 0.07
GM2A-203ENST00000523466 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
GM2A-203ENST00000523466 CUX2O14529 1486 aa15.46■□□□□ 0.07
GM2A-203ENST00000523466 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
GM2A-203ENST00000523466 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
GM2A-203ENST00000523466 PEG3Q9GZU2 1588 aa15.39■□□□□ 0.05
GM2A-203ENST00000523466 BAZ1BQ9UIG0 1483 aaKnown RBP15.38■□□□□ 0.05
GM2A-203ENST00000523466 NESP48681 1621 aa15.37■□□□□ 0.05
GM2A-203ENST00000523466 MROH2BQ7Z745 1585 aa15.32■□□□□ 0.04
GM2A-203ENST00000523466 LAMC3Q9Y6N6 1575 aa15.26■□□□□ 0.03
GM2A-203ENST00000523466 THOC2Q8NI27 1593 aaKnown RBP15.22■□□□□ 0.03
GM2A-203ENST00000523466 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
GM2A-203ENST00000523466 KIF21AQ7Z4S6 1674 aa15.16■□□□□ 0.02
GM2A-203ENST00000523466 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
GM2A-203ENST00000523466 WIZO95785 1651 aa15.12■□□□□ 0.01
GM2A-203ENST00000523466 MRC2Q9UBG0 1479 aa15.03■□□□□ -0
GM2A-203ENST00000523466 WDR62O43379 1518 aa15.01□□□□□ -0.01
GM2A-203ENST00000523466 RSF1Q96T23 1441 aaPredicted RBP14.99□□□□□ -0.01
GM2A-203ENST00000523466 CEP164Q9UPV0 1460 aa14.96□□□□□ -0.01
GM2A-203ENST00000523466 CFTRP13569 1480 aa14.95□□□□□ -0.02
GM2A-203ENST00000523466 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
GM2A-203ENST00000523466 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
GM2A-203ENST00000523466 URB2Q14146 1524 aaKnown RBP14.83□□□□□ -0.04
GM2A-203ENST00000523466 PRDM2Q13029 1718 aa14.79□□□□□ -0.04
GM2A-203ENST00000523466 TRIM41Q8WV44 630 aa14.78□□□□□ -0.04
GM2A-203ENST00000523466 CCDC88BA6NC98 1476 aa14.76□□□□□ -0.05
GM2A-203ENST00000523466 OSCARQ8IYS5 282 aa14.75□□□□□ -0.05
GM2A-203ENST00000523466 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
GM2A-203ENST00000523466 TOPBP1Q92547 1522 aa14.66□□□□□ -0.06
GM2A-203ENST00000523466 ZNF608Q9ULD9 1512 aaPredicted RBP14.66□□□□□ -0.06
GM2A-203ENST00000523466 ABCC8Q09428 1581 aa14.64□□□□□ -0.07
GM2A-203ENST00000523466 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
GM2A-203ENST00000523466 SENP3Q9H4L4 574 aaPredicted RBP14.57□□□□□ -0.08
GM2A-203ENST00000523466 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
GM2A-203ENST00000523466 RIMBP3CA6NJZ7 1639 aa14.55□□□□□ -0.08
GM2A-203ENST00000523466 RIMBP3BA6NNM3 1639 aa14.55□□□□□ -0.08
GM2A-203ENST00000523466 RIMBP3Q9UFD9 1639 aa14.55□□□□□ -0.08
GM2A-203ENST00000523466 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
GM2A-203ENST00000523466 AQRO60306 1485 aaKnown RBP eCLIP14.51□□□□□ -0.09
GM2A-203ENST00000523466 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
GM2A-203ENST00000523466 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
GM2A-203ENST00000523466 CHD1O14646 1710 aa14.46□□□□□ -0.09
GM2A-203ENST00000523466 RAD54L2Q9Y4B4 1467 aa14.45□□□□□ -0.1
GM2A-203ENST00000523466 SOGA1O94964 1423 aa14.45□□□□□ -0.1
GM2A-203ENST00000523466 TDRD9Q8NDG6 1382 aaKnown RBP14.42□□□□□ -0.1
GM2A-203ENST00000523466 FBLN2P98095 1184 aa14.41□□□□□ -0.1
GM2A-203ENST00000523466 CYB5RLQ6IPT4 315 aa14.41□□□□□ -0.1
GM2A-203ENST00000523466 FGD5Q6ZNL6 1462 aa14.4□□□□□ -0.1
GM2A-203ENST00000523466 WDR97A6NE52 1622 aa14.39□□□□□ -0.11
GM2A-203ENST00000523466 CUX1P39880 1505 aa14.39□□□□□ -0.11
GM2A-203ENST00000523466 SNAPC4Q5SXM2 1469 aa14.36□□□□□ -0.11
GM2A-203ENST00000523466 ARAP1Q96P48 1450 aa14.36□□□□□ -0.11
GM2A-203ENST00000523466 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
GM2A-203ENST00000523466 MAGI1Q96QZ7 1491 aaPredicted RBP14.33□□□□□ -0.12
GM2A-203ENST00000523466 GRIN2BQ13224 1484 aa14.32□□□□□ -0.12
GM2A-203ENST00000523466 CHMP7Q8WUX9 453 aaPredicted RBP14.32□□□□□ -0.12
GM2A-203ENST00000523466 CLASP1Q7Z460 1538 aa14.31□□□□□ -0.12
GM2A-203ENST00000523466 SYNJ2O15056 1496 aa14.29□□□□□ -0.12
GM2A-203ENST00000523466 SYNJ1O43426 1573 aa14.29□□□□□ -0.12
GM2A-203ENST00000523466 GAPVD1Q14C86 1478 aa14.26□□□□□ -0.13
GM2A-203ENST00000523466 ABCA10Q8WWZ4 1543 aa14.25□□□□□ -0.13
GM2A-203ENST00000523466 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
GM2A-203ENST00000523466 TRHP20396 242 aaPredicted RBP14.25□□□□□ -0.13
GM2A-203ENST00000523466 PBRM1Q86U86 1689 aa14.25□□□□□ -0.13
GM2A-203ENST00000523466 ABCA5Q8WWZ7 1642 aa14.23□□□□□ -0.13
GM2A-203ENST00000523466 WRNQ14191 1432 aaPredicted RBP eCLIP14.18□□□□□ -0.14
GM2A-203ENST00000523466 TOP2BQ02880 1626 aa14.15□□□□□ -0.14
GM2A-203ENST00000523466 BIVM-ERCC5R4GMW8 1640 aa14.15□□□□□ -0.14
GM2A-203ENST00000523466 GRIN2AQ12879 1464 aa14.13□□□□□ -0.15
GM2A-203ENST00000523466 ADAMTS12P58397 1594 aa14.11□□□□□ -0.15
GM2A-203ENST00000523466 NUP160Q12769 1436 aa14.1□□□□□ -0.15
GM2A-203ENST00000523466 CEP170Q5SW79 1584 aa14.09□□□□□ -0.15
GM2A-203ENST00000523466 FHAD1B1AJZ9 1412 aa14.08□□□□□ -0.15
GM2A-203ENST00000523466 ERCC6L2Q5T890 1561 aa14.08□□□□□ -0.16
GM2A-203ENST00000523466 ERICH3Q5RHP9 1530 aa14.07□□□□□ -0.16
GM2A-203ENST00000523466 SHROOM2Q13796 1616 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms