RNA–Protein interactions for RNA: ENST00000523464.1

EBF1-210, Transcript of early B cell factor 1, humanhuman

TSL 3

Gene EBF1, Length 766 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-210ENST00000523464 NISCHQ9Y2I1 1504 aa23.67■■□□□ 1.38
EBF1-210ENST00000523464 CCDC180Q9P1Z9 1646 aa21.33■■□□□ 1
EBF1-210ENST00000523464 ABCC9O60706 1549 aa21.3■■□□□ 1
EBF1-210ENST00000523464 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
EBF1-210ENST00000523464 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
EBF1-210ENST00000523464 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
EBF1-210ENST00000523464 NACADO15069 1562 aa20.22■□□□□ 0.83
EBF1-210ENST00000523464 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
EBF1-210ENST00000523464 MYO15BQ96JP2 1530 aa19.98■□□□□ 0.79
EBF1-210ENST00000523464 DCAF8L2P0C7V8 631 aa19.95■□□□□ 0.78
EBF1-210ENST00000523464 PABPN1Q86U42 306 aaKnown RBP eCLIP19.81■□□□□ 0.76
EBF1-210ENST00000523464 UNC13AQ9UPW8 1703 aa19.77■□□□□ 0.76
EBF1-210ENST00000523464 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
EBF1-210ENST00000523464 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
EBF1-210ENST00000523464 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
EBF1-210ENST00000523464 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
EBF1-210ENST00000523464 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
EBF1-210ENST00000523464 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
EBF1-210ENST00000523464 SCRIBQ14160 1630 aa19.27■□□□□ 0.68
EBF1-210ENST00000523464 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
EBF1-210ENST00000523464 DNAJC5Q9H3Z4 198 aa18.68■□□□□ 0.58
EBF1-210ENST00000523464 NCAPD3P42695 1498 aa18.67■□□□□ 0.58
EBF1-210ENST00000523464 CUX2O14529 1486 aa18.55■□□□□ 0.56
EBF1-210ENST00000523464 SMARCA2P51531 1590 aa18.53■□□□□ 0.56
EBF1-210ENST00000523464 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.56
EBF1-210ENST00000523464 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
EBF1-210ENST00000523464 ERCC6Q03468 1493 aa18.46■□□□□ 0.55
EBF1-210ENST00000523464 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
EBF1-210ENST00000523464 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
EBF1-210ENST00000523464 PEG3Q9GZU2 1588 aa18.36■□□□□ 0.53
EBF1-210ENST00000523464 BAZ1BQ9UIG0 1483 aaKnown RBP18.34■□□□□ 0.53
EBF1-210ENST00000523464 NESP48681 1621 aa18.25■□□□□ 0.51
EBF1-210ENST00000523464 LAMC3Q9Y6N6 1575 aa18.25■□□□□ 0.51
EBF1-210ENST00000523464 PDS5BQ9NTI5 1447 aa18.18■□□□□ 0.5
EBF1-210ENST00000523464 MROH2BQ7Z745 1585 aa18.17■□□□□ 0.5
EBF1-210ENST00000523464 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
EBF1-210ENST00000523464 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
EBF1-210ENST00000523464 CADPSQ9ULU8 1353 aa18.08■□□□□ 0.49
EBF1-210ENST00000523464 KIF21AQ7Z4S6 1674 aa18.02■□□□□ 0.47
EBF1-210ENST00000523464 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
EBF1-210ENST00000523464 WIZO95785 1651 aa17.92■□□□□ 0.46
EBF1-210ENST00000523464 WDR62O43379 1518 aa17.91■□□□□ 0.46
EBF1-210ENST00000523464 CEP164Q9UPV0 1460 aa17.86■□□□□ 0.45
EBF1-210ENST00000523464 CFTRP13569 1480 aa17.84■□□□□ 0.45
EBF1-210ENST00000523464 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
EBF1-210ENST00000523464 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
EBF1-210ENST00000523464 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
EBF1-210ENST00000523464 OSCARQ8IYS5 282 aa17.71■□□□□ 0.43
EBF1-210ENST00000523464 TRIM41Q8WV44 630 aa17.66■□□□□ 0.42
EBF1-210ENST00000523464 URB2Q14146 1524 aaKnown RBP17.64■□□□□ 0.41
EBF1-210ENST00000523464 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
EBF1-210ENST00000523464 ABCC8Q09428 1581 aa17.56■□□□□ 0.4
EBF1-210ENST00000523464 CCDC88BA6NC98 1476 aa17.54■□□□□ 0.4
EBF1-210ENST00000523464 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
EBF1-210ENST00000523464 SENP3Q9H4L4 574 aaPredicted RBP17.51■□□□□ 0.39
EBF1-210ENST00000523464 TOPBP1Q92547 1522 aa17.46■□□□□ 0.39
EBF1-210ENST00000523464 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
EBF1-210ENST00000523464 DNMBPQ6XZF7 1577 aa17.4■□□□□ 0.38
EBF1-210ENST00000523464 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
EBF1-210ENST00000523464 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
EBF1-210ENST00000523464 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
EBF1-210ENST00000523464 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
EBF1-210ENST00000523464 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
EBF1-210ENST00000523464 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
EBF1-210ENST00000523464 AQRO60306 1485 aaKnown RBP eCLIP17.27■□□□□ 0.36
EBF1-210ENST00000523464 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.36
EBF1-210ENST00000523464 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
EBF1-210ENST00000523464 SOGA1O94964 1423 aa17.22■□□□□ 0.35
EBF1-210ENST00000523464 CYB5RLQ6IPT4 315 aa17.21■□□□□ 0.35
EBF1-210ENST00000523464 CHD1O14646 1710 aa17.2■□□□□ 0.34
EBF1-210ENST00000523464 FBLN2P98095 1184 aa17.19■□□□□ 0.34
EBF1-210ENST00000523464 RAD54L2Q9Y4B4 1467 aa17.16■□□□□ 0.34
EBF1-210ENST00000523464 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
EBF1-210ENST00000523464 MAGI1Q96QZ7 1491 aaPredicted RBP17.13■□□□□ 0.33
EBF1-210ENST00000523464 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
EBF1-210ENST00000523464 CHMP7Q8WUX9 453 aaPredicted RBP17.12■□□□□ 0.33
EBF1-210ENST00000523464 ARAP1Q96P48 1450 aa17.12■□□□□ 0.33
EBF1-210ENST00000523464 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
EBF1-210ENST00000523464 SYNJ1O43426 1573 aa17.08■□□□□ 0.32
EBF1-210ENST00000523464 CUX1P39880 1505 aa17.08■□□□□ 0.32
EBF1-210ENST00000523464 SNAPC4Q5SXM2 1469 aa17.08■□□□□ 0.32
EBF1-210ENST00000523464 CLASP1Q7Z460 1538 aa17.06■□□□□ 0.32
EBF1-210ENST00000523464 SYNJ2O15056 1496 aa17.06■□□□□ 0.32
EBF1-210ENST00000523464 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
EBF1-210ENST00000523464 GAPVD1Q14C86 1478 aa17.01■□□□□ 0.31
EBF1-210ENST00000523464 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
EBF1-210ENST00000523464 PBRM1Q86U86 1689 aa16.94■□□□□ 0.3
EBF1-210ENST00000523464 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
EBF1-210ENST00000523464 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
EBF1-210ENST00000523464 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
EBF1-210ENST00000523464 SUPT5HO00267 1087 aaKnown RBP16.85■□□□□ 0.29
EBF1-210ENST00000523464 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
EBF1-210ENST00000523464 NUP160Q12769 1436 aa16.82■□□□□ 0.28
EBF1-210ENST00000523464 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
EBF1-210ENST00000523464 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
EBF1-210ENST00000523464 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
EBF1-210ENST00000523464 ADAMTS12P58397 1594 aa16.79■□□□□ 0.28
EBF1-210ENST00000523464 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
EBF1-210ENST00000523464 SHROOM2Q13796 1616 aa16.75■□□□□ 0.27
EBF1-210ENST00000523464 CEP170Q5SW79 1584 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms