RNA–Protein interactions for RNA: ENST00000523341.5

LINC01606-209, Transcript of long intergenic non-protein coding RNA 1606, humanhuman

TSL 3

Gene LINC01606, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01606-209ENST00000523341 NISCHQ9Y2I1 1504 aa32.29■■■□□ 2.76
LINC01606-209ENST00000523341 CCDC180Q9P1Z9 1646 aa28.87■■■□□ 2.21
LINC01606-209ENST00000523341 AEBP2Q6ZN18 517 aaPredicted RBP28.56■■■□□ 2.16
LINC01606-209ENST00000523341 ABCC9O60706 1549 aa28.47■■■□□ 2.15
LINC01606-209ENST00000523341 CHIC1Q5VXU3 224 aa27.54■■■□□ 2
LINC01606-209ENST00000523341 RB1CC1Q8TDY2 1594 aa27.25■■□□□ 1.95
LINC01606-209ENST00000523341 NACADO15069 1562 aa27.14■■□□□ 1.94
LINC01606-209ENST00000523341 DCAF8L2P0C7V8 631 aa26.9■■□□□ 1.9
LINC01606-209ENST00000523341 MYO15BQ96JP2 1530 aa26.9■■□□□ 1.9
LINC01606-209ENST00000523341 ZCCHC6Q5VYS8 1495 aaKnown RBP26.87■■□□□ 1.89
LINC01606-209ENST00000523341 UNC13AQ9UPW8 1703 aa26.78■■□□□ 1.88
LINC01606-209ENST00000523341 DCAF1Q9Y4B6 1507 aa26.69■■□□□ 1.86
LINC01606-209ENST00000523341 BICRAQ9NZM4 1560 aa26.55■■□□□ 1.84
LINC01606-209ENST00000523341 PABPN1Q86U42 306 aaKnown RBP eCLIP26.5■■□□□ 1.83
LINC01606-209ENST00000523341 DNAJC5BQ9UF47 199 aa26.5■■□□□ 1.83
LINC01606-209ENST00000523341 SCRIBQ14160 1630 aa26.32■■□□□ 1.8
LINC01606-209ENST00000523341 SHROOM4Q9ULL8 1493 aa26.12■■□□□ 1.77
LINC01606-209ENST00000523341 EIF4G1Q04637 1599 aaKnown RBP25.81■■□□□ 1.72
LINC01606-209ENST00000523341 CC2D2AQ9P2K1 1620 aa25.78■■□□□ 1.72
LINC01606-209ENST00000523341 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
LINC01606-209ENST00000523341 SMARCA4P51532 1647 aa25.15■■□□□ 1.62
LINC01606-209ENST00000523341 NCAPD3P42695 1498 aa25.04■■□□□ 1.6
LINC01606-209ENST00000523341 ATAD2BQ9ULI0 1458 aa25.03■■□□□ 1.6
LINC01606-209ENST00000523341 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
LINC01606-209ENST00000523341 SMARCA2P51531 1590 aa24.97■■□□□ 1.59
LINC01606-209ENST00000523341 HMGXB3Q12766 1538 aa24.94■■□□□ 1.58
LINC01606-209ENST00000523341 DNAJC5Q9H3Z4 198 aa24.91■■□□□ 1.58
LINC01606-209ENST00000523341 MROH2BQ7Z745 1585 aa24.91■■□□□ 1.58
LINC01606-209ENST00000523341 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
LINC01606-209ENST00000523341 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
LINC01606-209ENST00000523341 WIZO95785 1651 aa24.65■■□□□ 1.54
LINC01606-209ENST00000523341 NESP48681 1621 aa24.61■■□□□ 1.53
LINC01606-209ENST00000523341 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
LINC01606-209ENST00000523341 ERCC6Q03468 1493 aa24.5■■□□□ 1.51
LINC01606-209ENST00000523341 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
LINC01606-209ENST00000523341 LAMC3Q9Y6N6 1575 aa24.45■■□□□ 1.5
LINC01606-209ENST00000523341 CUX2O14529 1486 aa24.38■■□□□ 1.49
LINC01606-209ENST00000523341 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
LINC01606-209ENST00000523341 THOC2Q8NI27 1593 aaKnown RBP24.34■■□□□ 1.49
LINC01606-209ENST00000523341 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
LINC01606-209ENST00000523341 CADPSQ9ULU8 1353 aa24.27■■□□□ 1.48
LINC01606-209ENST00000523341 PDS5BQ9NTI5 1447 aa24.21■■□□□ 1.47
LINC01606-209ENST00000523341 PHF23Q9BUL5 403 aaPredicted RBP24.13■■□□□ 1.45
LINC01606-209ENST00000523341 CFTRP13569 1480 aa24.11■■□□□ 1.45
LINC01606-209ENST00000523341 MRC2Q9UBG0 1479 aa24.06■■□□□ 1.44
LINC01606-209ENST00000523341 WDR62O43379 1518 aa24.03■■□□□ 1.44
LINC01606-209ENST00000523341 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
LINC01606-209ENST00000523341 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
LINC01606-209ENST00000523341 CEP164Q9UPV0 1460 aa24.01■■□□□ 1.43
LINC01606-209ENST00000523341 PRDM2Q13029 1718 aa24■■□□□ 1.43
LINC01606-209ENST00000523341 URB2Q14146 1524 aaKnown RBP23.86■■□□□ 1.41
LINC01606-209ENST00000523341 TOPBP1Q92547 1522 aa23.64■■□□□ 1.37
LINC01606-209ENST00000523341 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
LINC01606-209ENST00000523341 TRIM41Q8WV44 630 aa23.54■■□□□ 1.36
LINC01606-209ENST00000523341 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
LINC01606-209ENST00000523341 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
LINC01606-209ENST00000523341 IFT140Q96RY7 1462 aa23.51■■□□□ 1.35
LINC01606-209ENST00000523341 ZNF608Q9ULD9 1512 aaPredicted RBP23.5■■□□□ 1.35
LINC01606-209ENST00000523341 TARBP1Q13395 1621 aaKnown RBP23.46■■□□□ 1.35
LINC01606-209ENST00000523341 EIF4G3O43432 1585 aaKnown RBP23.43■■□□□ 1.34
LINC01606-209ENST00000523341 POLA1P09884 1462 aaPredicted RBP23.42■■□□□ 1.34
LINC01606-209ENST00000523341 CUX1P39880 1505 aa23.39■■□□□ 1.34
LINC01606-209ENST00000523341 RAD54L2Q9Y4B4 1467 aa23.32■■□□□ 1.32
LINC01606-209ENST00000523341 FGD5Q6ZNL6 1462 aa23.31■■□□□ 1.32
LINC01606-209ENST00000523341 AQRO60306 1485 aaKnown RBP eCLIP23.29■■□□□ 1.32
LINC01606-209ENST00000523341 WDR97A6NE52 1622 aa23.25■■□□□ 1.31
LINC01606-209ENST00000523341 SOGA1O94964 1423 aa23.25■■□□□ 1.31
LINC01606-209ENST00000523341 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
LINC01606-209ENST00000523341 CHD1O14646 1710 aa23.2■■□□□ 1.3
LINC01606-209ENST00000523341 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
LINC01606-209ENST00000523341 BIVM-ERCC5R4GMW8 1640 aa23.13■■□□□ 1.29
LINC01606-209ENST00000523341 SYNJ1O43426 1573 aa23.12■■□□□ 1.29
LINC01606-209ENST00000523341 TOP2BQ02880 1626 aa23.09■■□□□ 1.29
LINC01606-209ENST00000523341 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
LINC01606-209ENST00000523341 PBRM1Q86U86 1689 aa23.08■■□□□ 1.29
LINC01606-209ENST00000523341 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.28
LINC01606-209ENST00000523341 ABCA10Q8WWZ4 1543 aa23.07■■□□□ 1.28
LINC01606-209ENST00000523341 RIMBP3CA6NJZ7 1639 aa23.05■■□□□ 1.28
LINC01606-209ENST00000523341 RIMBP3BA6NNM3 1639 aa23.05■■□□□ 1.28
LINC01606-209ENST00000523341 RIMBP3Q9UFD9 1639 aa23.05■■□□□ 1.28
LINC01606-209ENST00000523341 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.285e-6■■■■■ 54.3
LINC01606-209ENST00000523341 GRIN2BQ13224 1484 aa23.03■■□□□ 1.28
LINC01606-209ENST00000523341 MAGI1Q96QZ7 1491 aaPredicted RBP23.01■■□□□ 1.27
LINC01606-209ENST00000523341 GAPVD1Q14C86 1478 aa22.99■■□□□ 1.27
LINC01606-209ENST00000523341 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
LINC01606-209ENST00000523341 FBLN2P98095 1184 aa22.94■■□□□ 1.26
LINC01606-209ENST00000523341 CLASP1Q7Z460 1538 aa22.93■■□□□ 1.26
LINC01606-209ENST00000523341 SYNJ2O15056 1496 aa22.93■■□□□ 1.26
LINC01606-209ENST00000523341 ADAMTS12P58397 1594 aa22.86■■□□□ 1.25
LINC01606-209ENST00000523341 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.25
LINC01606-209ENST00000523341 ARAP1Q96P48 1450 aa22.8■■□□□ 1.24
LINC01606-209ENST00000523341 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
LINC01606-209ENST00000523341 GRIN2AQ12879 1464 aa22.76■■□□□ 1.23
LINC01606-209ENST00000523341 CEP170Q5SW79 1584 aa22.73■■□□□ 1.23
LINC01606-209ENST00000523341 FHAD1B1AJZ9 1412 aa22.71■■□□□ 1.23
LINC01606-209ENST00000523341 NUP160Q12769 1436 aa22.68■■□□□ 1.22
LINC01606-209ENST00000523341 FOXD1Q16676 465 aa22.67■■□□□ 1.22
LINC01606-209ENST00000523341 CYB5RLQ6IPT4 315 aa22.66■■□□□ 1.22
LINC01606-209ENST00000523341 ERCC6L2Q5T890 1561 aa22.62■■□□□ 1.21
LINC01606-209ENST00000523341 SHROOM2Q13796 1616 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms