RNA–Protein interactions for RNA: ENST00000523249.1

AP3M2-216, Transcript of adaptor related protein complex 3 subunit mu 2, humanhuman

TSL 5

Gene AP3M2, Length 651 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M2-216ENST00000523249 NISCHQ9Y2I1 1504 aa29.29■■■□□ 2.28
AP3M2-216ENST00000523249 CCDC180Q9P1Z9 1646 aa26.27■■□□□ 1.8
AP3M2-216ENST00000523249 ABCC9O60706 1549 aa26.16■■□□□ 1.78
AP3M2-216ENST00000523249 RB1CC1Q8TDY2 1594 aa24.98■■□□□ 1.59
AP3M2-216ENST00000523249 NACADO15069 1562 aa24.86■■□□□ 1.57
AP3M2-216ENST00000523249 DNAJC5BQ9UF47 199 aa24.63■■□□□ 1.53
AP3M2-216ENST00000523249 MYO15BQ96JP2 1530 aa24.61■■□□□ 1.53
AP3M2-216ENST00000523249 DCAF8L2P0C7V8 631 aa24.58■■□□□ 1.53
AP3M2-216ENST00000523249 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
AP3M2-216ENST00000523249 PABPN1Q86U42 306 aaKnown RBP eCLIP24.37■■□□□ 1.49
AP3M2-216ENST00000523249 DCAF1Q9Y4B6 1507 aa24.28■■□□□ 1.48
AP3M2-216ENST00000523249 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
AP3M2-216ENST00000523249 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
AP3M2-216ENST00000523249 AEBP2Q6ZN18 517 aaPredicted RBP24.19■■□□□ 1.46
AP3M2-216ENST00000523249 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
AP3M2-216ENST00000523249 SCRIBQ14160 1630 aa23.81■■□□□ 1.4
AP3M2-216ENST00000523249 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
AP3M2-216ENST00000523249 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
AP3M2-216ENST00000523249 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
AP3M2-216ENST00000523249 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
AP3M2-216ENST00000523249 NCAPD3P42695 1498 aa22.98■■□□□ 1.27
AP3M2-216ENST00000523249 ATAD2BQ9ULI0 1458 aa22.86■■□□□ 1.25
AP3M2-216ENST00000523249 SMARCA4P51532 1647 aa22.8■■□□□ 1.24
AP3M2-216ENST00000523249 SMARCA2P51531 1590 aa22.8■■□□□ 1.24
AP3M2-216ENST00000523249 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
AP3M2-216ENST00000523249 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
AP3M2-216ENST00000523249 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
AP3M2-216ENST00000523249 DNAJC5Q9H3Z4 198 aa22.66■■□□□ 1.22
AP3M2-216ENST00000523249 CUX2O14529 1486 aa22.65■■□□□ 1.22
AP3M2-216ENST00000523249 BAZ1BQ9UIG0 1483 aaKnown RBP22.59■■□□□ 1.21
AP3M2-216ENST00000523249 ERCC6Q03468 1493 aa22.58■■□□□ 1.2
AP3M2-216ENST00000523249 MROH2BQ7Z745 1585 aa22.53■■□□□ 1.2
AP3M2-216ENST00000523249 NESP48681 1621 aa22.49■■□□□ 1.19
AP3M2-216ENST00000523249 LAMC3Q9Y6N6 1575 aa22.41■■□□□ 1.18
AP3M2-216ENST00000523249 PDS5BQ9NTI5 1447 aa22.29■■□□□ 1.16
AP3M2-216ENST00000523249 THOC2Q8NI27 1593 aaKnown RBP22.28■■□□□ 1.16
AP3M2-216ENST00000523249 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
AP3M2-216ENST00000523249 WIZO95785 1651 aa22.21■■□□□ 1.15
AP3M2-216ENST00000523249 KIF21AQ7Z4S6 1674 aa22.19■■□□□ 1.14
AP3M2-216ENST00000523249 RSF1Q96T23 1441 aaPredicted RBP22.11■■□□□ 1.13
AP3M2-216ENST00000523249 MRC2Q9UBG0 1479 aa22.05■■□□□ 1.12
AP3M2-216ENST00000523249 WDR62O43379 1518 aa22.01■■□□□ 1.11
AP3M2-216ENST00000523249 CFTRP13569 1480 aa22.01■■□□□ 1.11
AP3M2-216ENST00000523249 TOP2AP11388 1531 aaKnown RBP21.98■■□□□ 1.11
AP3M2-216ENST00000523249 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
AP3M2-216ENST00000523249 FANCD2Q9BXW9 1451 aa21.94■■□□□ 1.1
AP3M2-216ENST00000523249 URB2Q14146 1524 aaKnown RBP21.77■■□□□ 1.08
AP3M2-216ENST00000523249 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
AP3M2-216ENST00000523249 PRDM2Q13029 1718 aa21.72■■□□□ 1.07
AP3M2-216ENST00000523249 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
AP3M2-216ENST00000523249 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
AP3M2-216ENST00000523249 IFT140Q96RY7 1462 aa21.56■■□□□ 1.04
AP3M2-216ENST00000523249 TOPBP1Q92547 1522 aa21.54■■□□□ 1.04
AP3M2-216ENST00000523249 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
AP3M2-216ENST00000523249 ZNF608Q9ULD9 1512 aaPredicted RBP21.47■■□□□ 1.03
AP3M2-216ENST00000523249 DNMBPQ6XZF7 1577 aa21.46■■□□□ 1.03
AP3M2-216ENST00000523249 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
AP3M2-216ENST00000523249 EIF4G3O43432 1585 aaKnown RBP21.32■■□□□ 1
AP3M2-216ENST00000523249 POLA1P09884 1462 aaPredicted RBP21.32■■□□□ 1
AP3M2-216ENST00000523249 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 1
AP3M2-216ENST00000523249 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
AP3M2-216ENST00000523249 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
AP3M2-216ENST00000523249 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
AP3M2-216ENST00000523249 SOGA1O94964 1423 aa21.23■□□□□ 0.99
AP3M2-216ENST00000523249 RAD54L2Q9Y4B4 1467 aa21.21■□□□□ 0.99
AP3M2-216ENST00000523249 ARHGEF11O15085 1522 aa21.21■□□□□ 0.99
AP3M2-216ENST00000523249 WDR97A6NE52 1622 aa21.19■□□□□ 0.98
AP3M2-216ENST00000523249 CUX1P39880 1505 aa21.16■□□□□ 0.98
AP3M2-216ENST00000523249 FGD5Q6ZNL6 1462 aa21.16■□□□□ 0.98
AP3M2-216ENST00000523249 TDRD9Q8NDG6 1382 aaKnown RBP21.16■□□□□ 0.98
AP3M2-216ENST00000523249 CHD1O14646 1710 aa21.15■□□□□ 0.98
AP3M2-216ENST00000523249 FBLN2P98095 1184 aa21.09■□□□□ 0.97
AP3M2-216ENST00000523249 MAGI1Q96QZ7 1491 aaPredicted RBP21.07■□□□□ 0.96
AP3M2-216ENST00000523249 GRIN2BQ13224 1484 aa21.06■□□□□ 0.96
AP3M2-216ENST00000523249 CYB5RLQ6IPT4 315 aa21.05■□□□□ 0.96
AP3M2-216ENST00000523249 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
AP3M2-216ENST00000523249 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
AP3M2-216ENST00000523249 CHMP7Q8WUX9 453 aaPredicted RBP21.01■□□□□ 0.95
AP3M2-216ENST00000523249 ARAP1Q96P48 1450 aa21■□□□□ 0.95
AP3M2-216ENST00000523249 CLASP1Q7Z460 1538 aa20.99■□□□□ 0.95
AP3M2-216ENST00000523249 ABCA10Q8WWZ4 1543 aa20.99■□□□□ 0.95
AP3M2-216ENST00000523249 SYNJ2O15056 1496 aa20.98■□□□□ 0.95
AP3M2-216ENST00000523249 GAPVD1Q14C86 1478 aa20.97■□□□□ 0.95
AP3M2-216ENST00000523249 SYNJ1O43426 1573 aa20.95■□□□□ 0.94
AP3M2-216ENST00000523249 ABCA5Q8WWZ7 1642 aa20.9■□□□□ 0.94
AP3M2-216ENST00000523249 PBRM1Q86U86 1689 aa20.89■□□□□ 0.94
AP3M2-216ENST00000523249 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.93
AP3M2-216ENST00000523249 TOP2BQ02880 1626 aa20.85■□□□□ 0.93
AP3M2-216ENST00000523249 BIVM-ERCC5R4GMW8 1640 aa20.84■□□□□ 0.93
AP3M2-216ENST00000523249 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
AP3M2-216ENST00000523249 TRHP20396 242 aaPredicted RBP20.76■□□□□ 0.91
AP3M2-216ENST00000523249 NUP160Q12769 1436 aa20.74■□□□□ 0.91
AP3M2-216ENST00000523249 FHAD1B1AJZ9 1412 aa20.73■□□□□ 0.91
AP3M2-216ENST00000523249 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
AP3M2-216ENST00000523249 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
AP3M2-216ENST00000523249 CEP170Q5SW79 1584 aa20.66■□□□□ 0.9
AP3M2-216ENST00000523249 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
AP3M2-216ENST00000523249 SHROOM2Q13796 1616 aa20.63■□□□□ 0.89
AP3M2-216ENST00000523249 ERCC6L2Q5T890 1561 aa20.6■□□□□ 0.89
AP3M2-216ENST00000523249 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms