RNA–Protein interactions for RNA: ENST00000523007.1

LRP12-207, Transcript of LDL receptor related protein 12, humanhuman

TSL 2

Gene LRP12, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP12-207ENST00000523007 NISCHQ9Y2I1 1504 aa22.51■■□□□ 1.19
LRP12-207ENST00000523007 CCDC180Q9P1Z9 1646 aa20.08■□□□□ 0.8
LRP12-207ENST00000523007 ABCC9O60706 1549 aa19.61■□□□□ 0.73
LRP12-207ENST00000523007 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
LRP12-207ENST00000523007 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
LRP12-207ENST00000523007 NACADO15069 1562 aa18.85■□□□□ 0.61
LRP12-207ENST00000523007 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.59
LRP12-207ENST00000523007 MYO15BQ96JP2 1530 aa18.76■□□□□ 0.59
LRP12-207ENST00000523007 DCAF1Q9Y4B6 1507 aa18.65■□□□□ 0.58
LRP12-207ENST00000523007 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
LRP12-207ENST00000523007 UNC13AQ9UPW8 1703 aa18.53■□□□□ 0.56
LRP12-207ENST00000523007 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
LRP12-207ENST00000523007 SCRIBQ14160 1630 aa18.27■□□□□ 0.51
LRP12-207ENST00000523007 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
LRP12-207ENST00000523007 SHROOM4Q9ULL8 1493 aa18.15■□□□□ 0.5
LRP12-207ENST00000523007 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
LRP12-207ENST00000523007 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
LRP12-207ENST00000523007 CHIC1Q5VXU3 224 aa17.84■□□□□ 0.45
LRP12-207ENST00000523007 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
LRP12-207ENST00000523007 CECR2Q9BXF3 1484 aa17.63■□□□□ 0.41
LRP12-207ENST00000523007 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
LRP12-207ENST00000523007 BAZ1AQ9NRL2 1556 aaPredicted RBP17.44■□□□□ 0.38
LRP12-207ENST00000523007 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
LRP12-207ENST00000523007 ATAD2BQ9ULI0 1458 aa17.38■□□□□ 0.37
LRP12-207ENST00000523007 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
LRP12-207ENST00000523007 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
LRP12-207ENST00000523007 MROH2BQ7Z745 1585 aa17.35■□□□□ 0.37
LRP12-207ENST00000523007 HMGXB3Q12766 1538 aa17.33■□□□□ 0.37
LRP12-207ENST00000523007 BAZ1BQ9UIG0 1483 aaKnown RBP17.22■□□□□ 0.35
LRP12-207ENST00000523007 WIZO95785 1651 aa17.16■□□□□ 0.34
LRP12-207ENST00000523007 RSF1Q96T23 1441 aaPredicted RBP17.11■□□□□ 0.33
LRP12-207ENST00000523007 NESP48681 1621 aa16.99■□□□□ 0.31
LRP12-207ENST00000523007 TOP2AP11388 1531 aaKnown RBP16.98■□□□□ 0.31
LRP12-207ENST00000523007 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
LRP12-207ENST00000523007 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
LRP12-207ENST00000523007 CADPSQ9ULU8 1353 aa16.84■□□□□ 0.29
LRP12-207ENST00000523007 KIF21AQ7Z4S6 1674 aa16.82■□□□□ 0.28
LRP12-207ENST00000523007 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
LRP12-207ENST00000523007 CUX2O14529 1486 aa16.78■□□□□ 0.28
LRP12-207ENST00000523007 PDS5BQ9NTI5 1447 aa16.78■□□□□ 0.28
LRP12-207ENST00000523007 CFTRP13569 1480 aa16.77■□□□□ 0.28
LRP12-207ENST00000523007 CCDC88BA6NC98 1476 aa16.74■□□□□ 0.27
LRP12-207ENST00000523007 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
LRP12-207ENST00000523007 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
LRP12-207ENST00000523007 MRC2Q9UBG0 1479 aa16.65■□□□□ 0.26
LRP12-207ENST00000523007 CEP164Q9UPV0 1460 aa16.65■□□□□ 0.26
LRP12-207ENST00000523007 WDR62O43379 1518 aa16.64■□□□□ 0.25
LRP12-207ENST00000523007 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
LRP12-207ENST00000523007 SUPT5HO00267 1087 aaKnown RBP16.49■□□□□ 0.23
LRP12-207ENST00000523007 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
LRP12-207ENST00000523007 DNMBPQ6XZF7 1577 aa16.4■□□□□ 0.22
LRP12-207ENST00000523007 ABCC8Q09428 1581 aa16.37■□□□□ 0.21
LRP12-207ENST00000523007 IFT140Q96RY7 1462 aa16.3■□□□□ 0.2
LRP12-207ENST00000523007 DNAJC5Q9H3Z4 198 aa16.29■□□□□ 0.2
LRP12-207ENST00000523007 CUX1P39880 1505 aa16.28■□□□□ 0.2
LRP12-207ENST00000523007 POLA1P09884 1462 aaPredicted RBP16.28■□□□□ 0.2
LRP12-207ENST00000523007 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.2
LRP12-207ENST00000523007 ZNF608Q9ULD9 1512 aaPredicted RBP16.25■□□□□ 0.19
LRP12-207ENST00000523007 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
LRP12-207ENST00000523007 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
LRP12-207ENST00000523007 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.19
LRP12-207ENST00000523007 RAD54L2Q9Y4B4 1467 aa16.17■□□□□ 0.18
LRP12-207ENST00000523007 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
LRP12-207ENST00000523007 BIVM-ERCC5R4GMW8 1640 aa16.15■□□□□ 0.18
LRP12-207ENST00000523007 SOGA1O94964 1423 aa16.14■□□□□ 0.17
LRP12-207ENST00000523007 TOP2BQ02880 1626 aa16.13■□□□□ 0.17
LRP12-207ENST00000523007 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
LRP12-207ENST00000523007 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
LRP12-207ENST00000523007 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.17
LRP12-207ENST00000523007 TDRD9Q8NDG6 1382 aaKnown RBP16.07■□□□□ 0.16
LRP12-207ENST00000523007 ABCA10Q8WWZ4 1543 aa16.07■□□□□ 0.16
LRP12-207ENST00000523007 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
LRP12-207ENST00000523007 CHD1O14646 1710 aa16.02■□□□□ 0.16
LRP12-207ENST00000523007 PBRM1Q86U86 1689 aa16.01■□□□□ 0.15
LRP12-207ENST00000523007 GRIN2BQ13224 1484 aa15.99■□□□□ 0.15
LRP12-207ENST00000523007 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
LRP12-207ENST00000523007 GAPVD1Q14C86 1478 aa15.98■□□□□ 0.15
LRP12-207ENST00000523007 MAGI1Q96QZ7 1491 aaPredicted RBP15.98■□□□□ 0.15
LRP12-207ENST00000523007 PHF23Q9BUL5 403 aaPredicted RBP15.98■□□□□ 0.15
LRP12-207ENST00000523007 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
LRP12-207ENST00000523007 SYNJ2O15056 1496 aa15.91■□□□□ 0.14
LRP12-207ENST00000523007 ADAMTS12P58397 1594 aa15.89■□□□□ 0.13
LRP12-207ENST00000523007 ERICH3Q5RHP9 1530 aa15.87■□□□□ 0.13
LRP12-207ENST00000523007 CLASP1Q7Z460 1538 aa15.87■□□□□ 0.13
LRP12-207ENST00000523007 RIMBP3CA6NJZ7 1639 aa15.84■□□□□ 0.13
LRP12-207ENST00000523007 RIMBP3BA6NNM3 1639 aa15.84■□□□□ 0.13
LRP12-207ENST00000523007 RIMBP3Q9UFD9 1639 aa15.84■□□□□ 0.13
LRP12-207ENST00000523007 ARHGEF11O15085 1522 aa15.83■□□□□ 0.12
LRP12-207ENST00000523007 FBLN2P98095 1184 aa15.82■□□□□ 0.12
LRP12-207ENST00000523007 GRIN2AQ12879 1464 aa15.81■□□□□ 0.12
LRP12-207ENST00000523007 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
LRP12-207ENST00000523007 FHAD1B1AJZ9 1412 aa15.79■□□□□ 0.12
LRP12-207ENST00000523007 NUP160Q12769 1436 aa15.77■□□□□ 0.11
LRP12-207ENST00000523007 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
LRP12-207ENST00000523007 KIF27Q86VH2 1401 aa15.76■□□□□ 0.11
LRP12-207ENST00000523007 CUL7Q14999 1698 aa15.72■□□□□ 0.11
LRP12-207ENST00000523007 IGF1RP08069 1367 aa15.72■□□□□ 0.11
LRP12-207ENST00000523007 ARAP1Q96P48 1450 aa15.71■□□□□ 0.1
LRP12-207ENST00000523007 SHROOM2Q13796 1616 aa15.68■□□□□ 0.1
LRP12-207ENST00000523007 RUSC2Q8N2Y8 1516 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms