RNA–Protein interactions for RNA: ENST00000522247.5

PREX2-204, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2, humanhuman

TSL 3

Gene PREX2, Length 425 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX2-204ENST00000522247 NISCHQ9Y2I1 1504 aa20.93■□□□□ 0.94
PREX2-204ENST00000522247 ABCC9O60706 1549 aa19.05■□□□□ 0.64
PREX2-204ENST00000522247 CCDC180Q9P1Z9 1646 aa18.91■□□□□ 0.62
PREX2-204ENST00000522247 RB1CC1Q8TDY2 1594 aa18.05■□□□□ 0.48
PREX2-204ENST00000522247 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
PREX2-204ENST00000522247 NACADO15069 1562 aa17.86■□□□□ 0.45
PREX2-204ENST00000522247 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
PREX2-204ENST00000522247 DCAF8L2P0C7V8 631 aa17.75■□□□□ 0.43
PREX2-204ENST00000522247 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
PREX2-204ENST00000522247 PABPN1Q86U42 306 aaKnown RBP eCLIP17.68■□□□□ 0.42
PREX2-204ENST00000522247 BICRAQ9NZM4 1560 aa17.54■□□□□ 0.4
PREX2-204ENST00000522247 MYO15BQ96JP2 1530 aa17.5■□□□□ 0.39
PREX2-204ENST00000522247 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
PREX2-204ENST00000522247 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
PREX2-204ENST00000522247 DCAF1Q9Y4B6 1507 aa17.23■□□□□ 0.35
PREX2-204ENST00000522247 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
PREX2-204ENST00000522247 SHROOM4Q9ULL8 1493 aa17.21■□□□□ 0.35
PREX2-204ENST00000522247 CECR2Q9BXF3 1484 aa17.16■□□□□ 0.34
PREX2-204ENST00000522247 EIF4G1Q04637 1599 aaKnown RBP17.12■□□□□ 0.33
PREX2-204ENST00000522247 DNAJC5Q9H3Z4 198 aa16.64■□□□□ 0.25
PREX2-204ENST00000522247 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
PREX2-204ENST00000522247 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
PREX2-204ENST00000522247 CUX2O14529 1486 aa16.44■□□□□ 0.22
PREX2-204ENST00000522247 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
PREX2-204ENST00000522247 SMARCA4P51532 1647 aa16.41■□□□□ 0.22
PREX2-204ENST00000522247 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
PREX2-204ENST00000522247 SMARCA2P51531 1590 aa16.37■□□□□ 0.21
PREX2-204ENST00000522247 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
PREX2-204ENST00000522247 NESP48681 1621 aa16.33■□□□□ 0.2
PREX2-204ENST00000522247 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.19
PREX2-204ENST00000522247 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
PREX2-204ENST00000522247 THOC2Q8NI27 1593 aaKnown RBP16.21■□□□□ 0.19
PREX2-204ENST00000522247 KIF21AQ7Z4S6 1674 aa16.19■□□□□ 0.18
PREX2-204ENST00000522247 PEG3Q9GZU2 1588 aa16.19■□□□□ 0.18
PREX2-204ENST00000522247 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
PREX2-204ENST00000522247 MROH2BQ7Z745 1585 aa16.15■□□□□ 0.18
PREX2-204ENST00000522247 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
PREX2-204ENST00000522247 WIZO95785 1651 aa16■□□□□ 0.15
PREX2-204ENST00000522247 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
PREX2-204ENST00000522247 MRC2Q9UBG0 1479 aa15.94■□□□□ 0.14
PREX2-204ENST00000522247 WDR62O43379 1518 aa15.91■□□□□ 0.14
PREX2-204ENST00000522247 TRIM41Q8WV44 630 aa15.87■□□□□ 0.13
PREX2-204ENST00000522247 CEP164Q9UPV0 1460 aa15.85■□□□□ 0.13
PREX2-204ENST00000522247 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
PREX2-204ENST00000522247 CFTRP13569 1480 aa15.74■□□□□ 0.11
PREX2-204ENST00000522247 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
PREX2-204ENST00000522247 TOP2AP11388 1531 aaKnown RBP15.73■□□□□ 0.11
PREX2-204ENST00000522247 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
PREX2-204ENST00000522247 URB2Q14146 1524 aaKnown RBP15.7■□□□□ 0.1
PREX2-204ENST00000522247 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
PREX2-204ENST00000522247 RIMBP3CA6NJZ7 1639 aa15.56■□□□□ 0.08
PREX2-204ENST00000522247 RIMBP3BA6NNM3 1639 aa15.56■□□□□ 0.08
PREX2-204ENST00000522247 RIMBP3Q9UFD9 1639 aa15.56■□□□□ 0.08
PREX2-204ENST00000522247 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
PREX2-204ENST00000522247 CCDC88BA6NC98 1476 aa15.53■□□□□ 0.08
PREX2-204ENST00000522247 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
PREX2-204ENST00000522247 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
PREX2-204ENST00000522247 EIF4G3O43432 1585 aaKnown RBP15.49■□□□□ 0.07
PREX2-204ENST00000522247 CHD1O14646 1710 aa15.47■□□□□ 0.07
PREX2-204ENST00000522247 ARHGEF11O15085 1522 aa15.45■□□□□ 0.06
PREX2-204ENST00000522247 DNMBPQ6XZF7 1577 aa15.45■□□□□ 0.06
PREX2-204ENST00000522247 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
PREX2-204ENST00000522247 TARBP1Q13395 1621 aaKnown RBP15.39■□□□□ 0.05
PREX2-204ENST00000522247 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.05
PREX2-204ENST00000522247 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.05
PREX2-204ENST00000522247 FBLN2P98095 1184 aa15.31■□□□□ 0.04
PREX2-204ENST00000522247 CYB5RLQ6IPT4 315 aa15.31■□□□□ 0.04
PREX2-204ENST00000522247 RAD54L2Q9Y4B4 1467 aa15.29■□□□□ 0.04
PREX2-204ENST00000522247 ARAP1Q96P48 1450 aa15.28■□□□□ 0.04
PREX2-204ENST00000522247 SENP3Q9H4L4 574 aaPredicted RBP15.24■□□□□ 0.03
PREX2-204ENST00000522247 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
PREX2-204ENST00000522247 SOGA1O94964 1423 aa15.23■□□□□ 0.03
PREX2-204ENST00000522247 SNAPC4Q5SXM2 1469 aa15.22■□□□□ 0.03
PREX2-204ENST00000522247 FGD5Q6ZNL6 1462 aa15.22■□□□□ 0.03
PREX2-204ENST00000522247 TRHP20396 242 aaPredicted RBP15.22■□□□□ 0.03
PREX2-204ENST00000522247 WDR97A6NE52 1622 aa15.2■□□□□ 0.02
PREX2-204ENST00000522247 CUX1P39880 1505 aa15.18■□□□□ 0.02
PREX2-204ENST00000522247 CLASP1Q7Z460 1538 aa15.18■□□□□ 0.02
PREX2-204ENST00000522247 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
PREX2-204ENST00000522247 SYNJ1O43426 1573 aa15.17■□□□□ 0.02
PREX2-204ENST00000522247 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
PREX2-204ENST00000522247 CHMP7Q8WUX9 453 aaPredicted RBP15.13■□□□□ 0.01
PREX2-204ENST00000522247 GRIN2BQ13224 1484 aa15.13■□□□□ 0.01
PREX2-204ENST00000522247 SYNJ2O15056 1496 aa15.09■□□□□ 0.01
PREX2-204ENST00000522247 GAPVD1Q14C86 1478 aa15.06■□□□□ 0
PREX2-204ENST00000522247 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
PREX2-204ENST00000522247 ABCA10Q8WWZ4 1543 aa15.01□□□□□ -0.01
PREX2-204ENST00000522247 ERCC6L2Q5T890 1561 aa14.98□□□□□ -0.01
PREX2-204ENST00000522247 ADAMTS12P58397 1594 aa14.96□□□□□ -0.01
PREX2-204ENST00000522247 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
PREX2-204ENST00000522247 GRIN2AQ12879 1464 aa14.95□□□□□ -0.02
PREX2-204ENST00000522247 SUPT5HO00267 1087 aaKnown RBP14.94□□□□□ -0.02
PREX2-204ENST00000522247 CEP170Q5SW79 1584 aa14.94□□□□□ -0.02
PREX2-204ENST00000522247 BIVM-ERCC5R4GMW8 1640 aa14.93□□□□□ -0.02
PREX2-204ENST00000522247 TOP2BQ02880 1626 aa14.9□□□□□ -0.02
PREX2-204ENST00000522247 WRNQ14191 1432 aaPredicted RBP eCLIP14.9□□□□□ -0.02
PREX2-204ENST00000522247 SHROOM2Q13796 1616 aa14.88□□□□□ -0.03
PREX2-204ENST00000522247 NUP160Q12769 1436 aa14.87□□□□□ -0.03
PREX2-204ENST00000522247 KIF13AQ9H1H9 1805 aa14.85□□□□□ -0.03
PREX2-204ENST00000522247 FHAD1B1AJZ9 1412 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms