RNA–Protein interactions for RNA: ENST00000520824.1

LINC00824-205, long intergenic non-protein coding RNA 824, humanhuman

TSL 2

Gene LINC00824, Length 892 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00824-205ENST00000520824 NISCHQ9Y2I1 1504 aa24■■□□□ 1.43
LINC00824-205ENST00000520824 ABCC9O60706 1549 aa21.99■■□□□ 1.11
LINC00824-205ENST00000520824 AEBP2Q6ZN18 517 aaPredicted RBP21.95■■□□□ 1.1
LINC00824-205ENST00000520824 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.05
LINC00824-205ENST00000520824 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
LINC00824-205ENST00000520824 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
LINC00824-205ENST00000520824 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
LINC00824-205ENST00000520824 PABPN1Q86U42 306 aaKnown RBP eCLIP20.44■□□□□ 0.86
LINC00824-205ENST00000520824 NACADO15069 1562 aa20.42■□□□□ 0.86
LINC00824-205ENST00000520824 CHIC1Q5VXU3 224 aa20.4■□□□□ 0.86
LINC00824-205ENST00000520824 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
LINC00824-205ENST00000520824 DCAF8L2P0C7V8 631 aa20.29■□□□□ 0.84
LINC00824-205ENST00000520824 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
LINC00824-205ENST00000520824 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
LINC00824-205ENST00000520824 CC2D2AQ9P2K1 1620 aa19.83■□□□□ 0.76
LINC00824-205ENST00000520824 SCRIBQ14160 1630 aa19.82■□□□□ 0.76
LINC00824-205ENST00000520824 CECR2Q9BXF3 1484 aa19.75■□□□□ 0.75
LINC00824-205ENST00000520824 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
LINC00824-205ENST00000520824 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
LINC00824-205ENST00000520824 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
LINC00824-205ENST00000520824 DNAJC5Q9H3Z4 198 aa19.23■□□□□ 0.67
LINC00824-205ENST00000520824 NESP48681 1621 aa18.9■□□□□ 0.62
LINC00824-205ENST00000520824 NCAPD3P42695 1498 aa18.89■□□□□ 0.61
LINC00824-205ENST00000520824 CUX2O14529 1486 aa18.87■□□□□ 0.61
LINC00824-205ENST00000520824 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
LINC00824-205ENST00000520824 ERCC6Q03468 1493 aa18.84■□□□□ 0.61
LINC00824-205ENST00000520824 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
LINC00824-205ENST00000520824 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
LINC00824-205ENST00000520824 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
LINC00824-205ENST00000520824 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
LINC00824-205ENST00000520824 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
LINC00824-205ENST00000520824 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
LINC00824-205ENST00000520824 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
LINC00824-205ENST00000520824 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
LINC00824-205ENST00000520824 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
LINC00824-205ENST00000520824 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
LINC00824-205ENST00000520824 LAMC3Q9Y6N6 1575 aa18.48■□□□□ 0.55
LINC00824-205ENST00000520824 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
LINC00824-205ENST00000520824 WIZO95785 1651 aa18.38■□□□□ 0.53
LINC00824-205ENST00000520824 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
LINC00824-205ENST00000520824 PDS5BQ9NTI5 1447 aa18.31■□□□□ 0.52
LINC00824-205ENST00000520824 WDR62O43379 1518 aa18.29■□□□□ 0.52
LINC00824-205ENST00000520824 CADPSQ9ULU8 1353 aa18.29■□□□□ 0.52
LINC00824-205ENST00000520824 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
LINC00824-205ENST00000520824 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.49
LINC00824-205ENST00000520824 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.49
LINC00824-205ENST00000520824 URB2Q14146 1524 aaKnown RBP18.12■□□□□ 0.49
LINC00824-205ENST00000520824 CFTRP13569 1480 aa18.07■□□□□ 0.48
LINC00824-205ENST00000520824 RSF1Q96T23 1441 aaPredicted RBP18.04■□□□□ 0.48
LINC00824-205ENST00000520824 TOP2AP11388 1531 aaKnown RBP18■□□□□ 0.47
LINC00824-205ENST00000520824 ZNF608Q9ULD9 1512 aaPredicted RBP17.97■□□□□ 0.47
LINC00824-205ENST00000520824 RIMBP3CA6NJZ7 1639 aa17.94■□□□□ 0.46
LINC00824-205ENST00000520824 RIMBP3BA6NNM3 1639 aa17.94■□□□□ 0.46
LINC00824-205ENST00000520824 RIMBP3Q9UFD9 1639 aa17.94■□□□□ 0.46
LINC00824-205ENST00000520824 OSCARQ8IYS5 282 aa17.91■□□□□ 0.46
LINC00824-205ENST00000520824 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
LINC00824-205ENST00000520824 CCDC88BA6NC98 1476 aa17.84■□□□□ 0.45
LINC00824-205ENST00000520824 ARHGEF11O15085 1522 aa17.82■□□□□ 0.44
LINC00824-205ENST00000520824 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
LINC00824-205ENST00000520824 TOPBP1Q92547 1522 aa17.8■□□□□ 0.44
LINC00824-205ENST00000520824 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
LINC00824-205ENST00000520824 CHD1O14646 1710 aa17.75■□□□□ 0.43
LINC00824-205ENST00000520824 TARBP1Q13395 1621 aaKnown RBP17.72■□□□□ 0.43
LINC00824-205ENST00000520824 AQRO60306 1485 aaKnown RBP eCLIP17.7■□□□□ 0.42
LINC00824-205ENST00000520824 ARAP1Q96P48 1450 aa17.68■□□□□ 0.42
LINC00824-205ENST00000520824 DNMBPQ6XZF7 1577 aa17.67■□□□□ 0.42
LINC00824-205ENST00000520824 CYB5RLQ6IPT4 315 aa17.63■□□□□ 0.41
LINC00824-205ENST00000520824 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
LINC00824-205ENST00000520824 POLA1P09884 1462 aaPredicted RBP17.62■□□□□ 0.41
LINC00824-205ENST00000520824 FOXD1Q16676 465 aa17.6■□□□□ 0.41
LINC00824-205ENST00000520824 TDRD9Q8NDG6 1382 aaKnown RBP17.53■□□□□ 0.4
LINC00824-205ENST00000520824 FBLN2P98095 1184 aa17.51■□□□□ 0.39
LINC00824-205ENST00000520824 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
LINC00824-205ENST00000520824 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
LINC00824-205ENST00000520824 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
LINC00824-205ENST00000520824 CUX1P39880 1505 aa17.47■□□□□ 0.39
LINC00824-205ENST00000520824 FGD5Q6ZNL6 1462 aa17.47■□□□□ 0.39
LINC00824-205ENST00000520824 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
LINC00824-205ENST00000520824 SOGA1O94964 1423 aa17.44■□□□□ 0.38
LINC00824-205ENST00000520824 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
LINC00824-205ENST00000520824 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
LINC00824-205ENST00000520824 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
LINC00824-205ENST00000520824 PBRM1Q86U86 1689 aa17.35■□□□□ 0.37
LINC00824-205ENST00000520824 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
LINC00824-205ENST00000520824 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
LINC00824-205ENST00000520824 GRIN2BQ13224 1484 aa17.3■□□□□ 0.36
LINC00824-205ENST00000520824 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
LINC00824-205ENST00000520824 ABCA5Q8WWZ7 1642 aa17.28■□□□□ 0.36
LINC00824-205ENST00000520824 CHMP7Q8WUX9 453 aaPredicted RBP17.27■□□□□ 0.36
LINC00824-205ENST00000520824 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
LINC00824-205ENST00000520824 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
LINC00824-205ENST00000520824 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
LINC00824-205ENST00000520824 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
LINC00824-205ENST00000520824 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
LINC00824-205ENST00000520824 NUP160Q12769 1436 aa17.1■□□□□ 0.33
LINC00824-205ENST00000520824 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
LINC00824-205ENST00000520824 KIF13AQ9H1H9 1805 aa17.1■□□□□ 0.33
LINC00824-205ENST00000520824 BIVM-ERCC5R4GMW8 1640 aa17.06■□□□□ 0.32
LINC00824-205ENST00000520824 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
LINC00824-205ENST00000520824 SUPT5HO00267 1087 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms