RNA–Protein interactions for RNA: ENST00000520725.5

DENND3-214, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-214ENST00000520725 NISCHQ9Y2I1 1504 aa31.45■■■□□ 2.63
DENND3-214ENST00000520725 ABCC9O60706 1549 aa29.35■■■□□ 2.29
DENND3-214ENST00000520725 CCDC180Q9P1Z9 1646 aa28.69■■■□□ 2.18
DENND3-214ENST00000520725 DNAJC5BQ9UF47 199 aa28.21■■■□□ 2.11
DENND3-214ENST00000520725 RB1CC1Q8TDY2 1594 aa27.63■■■□□ 2.01
DENND3-214ENST00000520725 NACADO15069 1562 aa27.22■■□□□ 1.95
DENND3-214ENST00000520725 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
DENND3-214ENST00000520725 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
DENND3-214ENST00000520725 BICRAQ9NZM4 1560 aa26.91■■□□□ 1.9
DENND3-214ENST00000520725 DCAF8L2P0C7V8 631 aa26.67■■□□□ 1.86
DENND3-214ENST00000520725 MYO15BQ96JP2 1530 aa26.59■■□□□ 1.85
DENND3-214ENST00000520725 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
DENND3-214ENST00000520725 CECR2Q9BXF3 1484 aa26.53■■□□□ 1.84
DENND3-214ENST00000520725 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
DENND3-214ENST00000520725 SHROOM4Q9ULL8 1493 aa26.42■■□□□ 1.82
DENND3-214ENST00000520725 ZCCHC6Q5VYS8 1495 aaKnown RBP26.4■■□□□ 1.82
DENND3-214ENST00000520725 EIF4G1Q04637 1599 aaKnown RBP26.28■■□□□ 1.8
DENND3-214ENST00000520725 DCAF1Q9Y4B6 1507 aa26.06■■□□□ 1.76
DENND3-214ENST00000520725 SCRIBQ14160 1630 aa26.03■■□□□ 1.76
DENND3-214ENST00000520725 CUX2O14529 1486 aa25.66■■□□□ 1.7
DENND3-214ENST00000520725 ERCC6Q03468 1493 aa25.38■■□□□ 1.65
DENND3-214ENST00000520725 NCAPD3P42695 1498 aa25.1■■□□□ 1.61
DENND3-214ENST00000520725 THOC2Q8NI27 1593 aaKnown RBP25.02■■□□□ 1.6
DENND3-214ENST00000520725 NESP48681 1621 aa25.01■■□□□ 1.59
DENND3-214ENST00000520725 TRIM41Q8WV44 630 aa24.95■■□□□ 1.58
DENND3-214ENST00000520725 HMGXB3Q12766 1538 aa24.91■■□□□ 1.58
DENND3-214ENST00000520725 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
DENND3-214ENST00000520725 SMARCA2P51531 1590 aa24.83■■□□□ 1.57
DENND3-214ENST00000520725 KIF21AQ7Z4S6 1674 aa24.76■■□□□ 1.55
DENND3-214ENST00000520725 SMARCA4P51532 1647 aa24.75■■□□□ 1.55
DENND3-214ENST00000520725 LAMC3Q9Y6N6 1575 aa24.73■■□□□ 1.55
DENND3-214ENST00000520725 BAZ1BQ9UIG0 1483 aaKnown RBP24.63■■□□□ 1.53
DENND3-214ENST00000520725 PEG3Q9GZU2 1588 aa24.53■■□□□ 1.52
DENND3-214ENST00000520725 PDS5BQ9NTI5 1447 aa24.52■■□□□ 1.52
DENND3-214ENST00000520725 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
DENND3-214ENST00000520725 WDR62O43379 1518 aa24.43■■□□□ 1.5
DENND3-214ENST00000520725 MRC2Q9UBG0 1479 aa24.41■■□□□ 1.5
DENND3-214ENST00000520725 MROH2BQ7Z745 1585 aa24.3■■□□□ 1.48
DENND3-214ENST00000520725 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
DENND3-214ENST00000520725 RSF1Q96T23 1441 aaPredicted RBP24.25■■□□□ 1.47
DENND3-214ENST00000520725 OSCARQ8IYS5 282 aa24.21■■□□□ 1.47
DENND3-214ENST00000520725 RIMBP3CA6NJZ7 1639 aa24.19■■□□□ 1.46
DENND3-214ENST00000520725 RIMBP3BA6NNM3 1639 aa24.19■■□□□ 1.46
DENND3-214ENST00000520725 RIMBP3Q9UFD9 1639 aa24.19■■□□□ 1.46
DENND3-214ENST00000520725 CEP164Q9UPV0 1460 aa24.15■■□□□ 1.46
DENND3-214ENST00000520725 WIZO95785 1651 aa24.09■■□□□ 1.45
DENND3-214ENST00000520725 FANCD2Q9BXW9 1451 aa24.03■■□□□ 1.44
DENND3-214ENST00000520725 SUPT5HO00267 1087 aaKnown RBP24.02■■□□□ 1.44
DENND3-214ENST00000520725 ARHGEF11O15085 1522 aa23.99■■□□□ 1.43
DENND3-214ENST00000520725 URB2Q14146 1524 aaKnown RBP23.93■■□□□ 1.42
DENND3-214ENST00000520725 CFTRP13569 1480 aa23.86■■□□□ 1.41
DENND3-214ENST00000520725 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.41
DENND3-214ENST00000520725 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
DENND3-214ENST00000520725 PRDM2Q13029 1718 aa23.73■■□□□ 1.39
DENND3-214ENST00000520725 CYB5RLQ6IPT4 315 aa23.7■■□□□ 1.38
DENND3-214ENST00000520725 ARAP1Q96P48 1450 aa23.69■■□□□ 1.38
DENND3-214ENST00000520725 TRHP20396 242 aaPredicted RBP23.69■■□□□ 1.38
DENND3-214ENST00000520725 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
DENND3-214ENST00000520725 CHD1O14646 1710 aa23.66■■□□□ 1.38
DENND3-214ENST00000520725 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
DENND3-214ENST00000520725 AEBP2Q6ZN18 517 aaPredicted RBP23.61■■□□□ 1.37
DENND3-214ENST00000520725 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
DENND3-214ENST00000520725 TOPBP1Q92547 1522 aa23.5■■□□□ 1.35
DENND3-214ENST00000520725 TARBP1Q13395 1621 aaKnown RBP23.43■■□□□ 1.34
DENND3-214ENST00000520725 AQRO60306 1485 aaKnown RBP eCLIP23.38■■□□□ 1.33
DENND3-214ENST00000520725 DNMBPQ6XZF7 1577 aa23.38■■□□□ 1.33
DENND3-214ENST00000520725 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
DENND3-214ENST00000520725 CLASP1Q7Z460 1538 aa23.33■■□□□ 1.32
DENND3-214ENST00000520725 FBLN2P98095 1184 aa23.29■■□□□ 1.32
DENND3-214ENST00000520725 POLA1P09884 1462 aaPredicted RBP23.22■■□□□ 1.31
DENND3-214ENST00000520725 SYNJ1O43426 1573 aa23.2■■□□□ 1.3
DENND3-214ENST00000520725 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
DENND3-214ENST00000520725 WDR97A6NE52 1622 aa23.13■■□□□ 1.29
DENND3-214ENST00000520725 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
DENND3-214ENST00000520725 TDRD9Q8NDG6 1382 aaKnown RBP23.07■■□□□ 1.28
DENND3-214ENST00000520725 GAPVD1Q14C86 1478 aa23.06■■□□□ 1.28
DENND3-214ENST00000520725 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
DENND3-214ENST00000520725 SOGA1O94964 1423 aa23.01■■□□□ 1.27
DENND3-214ENST00000520725 SYNJ2O15056 1496 aa22.99■■□□□ 1.27
DENND3-214ENST00000520725 CHMP7Q8WUX9 453 aaPredicted RBP22.99■■□□□ 1.27
DENND3-214ENST00000520725 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
DENND3-214ENST00000520725 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
DENND3-214ENST00000520725 PBRM1Q86U86 1689 aa22.95■■□□□ 1.26
DENND3-214ENST00000520725 FGD5Q6ZNL6 1462 aa22.94■■□□□ 1.26
DENND3-214ENST00000520725 KIF13AQ9H1H9 1805 aa22.92■■□□□ 1.26
DENND3-214ENST00000520725 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.26
DENND3-214ENST00000520725 CUX1P39880 1505 aa22.81■■□□□ 1.24
DENND3-214ENST00000520725 WRNQ14191 1432 aaPredicted RBP eCLIP22.76■■□□□ 1.23
DENND3-214ENST00000520725 ABCA5Q8WWZ7 1642 aa22.76■■□□□ 1.23
DENND3-214ENST00000520725 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
DENND3-214ENST00000520725 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
DENND3-214ENST00000520725 ILDR1Q86SU0 546 aaPredicted RBP22.75■■□□□ 1.23
DENND3-214ENST00000520725 TOP2BQ02880 1626 aa22.72■■□□□ 1.23
DENND3-214ENST00000520725 SHROOM2Q13796 1616 aa22.72■■□□□ 1.23
DENND3-214ENST00000520725 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
DENND3-214ENST00000520725 NUP160Q12769 1436 aa22.65■■□□□ 1.22
DENND3-214ENST00000520725 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
DENND3-214ENST00000520725 ABCA10Q8WWZ4 1543 aa22.63■■□□□ 1.21
DENND3-214ENST00000520725 KDM4FA0A1W2PPD8 638 aa22.59■■□□□ 1.21
DENND3-214ENST00000520725 KDM6BO15054 1643 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms