RNA–Protein interactions for RNA: ENST00000520637.1

MCM4-209, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-209ENST00000520637 NISCHQ9Y2I1 1504 aa27.04■■□□□ 1.92
MCM4-209ENST00000520637 ABCC9O60706 1549 aa24.67■■□□□ 1.54
MCM4-209ENST00000520637 CCDC180Q9P1Z9 1646 aa24.36■■□□□ 1.49
MCM4-209ENST00000520637 DNAJC5BQ9UF47 199 aa23.37■■□□□ 1.33
MCM4-209ENST00000520637 RB1CC1Q8TDY2 1594 aa23.35■■□□□ 1.33
MCM4-209ENST00000520637 NACADO15069 1562 aa23.11■■□□□ 1.29
MCM4-209ENST00000520637 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
MCM4-209ENST00000520637 PABPN1Q86U42 306 aaKnown RBP eCLIP22.94■■□□□ 1.26
MCM4-209ENST00000520637 UNC13AQ9UPW8 1703 aa22.77■■□□□ 1.24
MCM4-209ENST00000520637 MYO15BQ96JP2 1530 aa22.69■■□□□ 1.22
MCM4-209ENST00000520637 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
MCM4-209ENST00000520637 BICRAQ9NZM4 1560 aa22.65■■□□□ 1.22
MCM4-209ENST00000520637 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
MCM4-209ENST00000520637 SHROOM4Q9ULL8 1493 aa22.34■■□□□ 1.17
MCM4-209ENST00000520637 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
MCM4-209ENST00000520637 CC2D2AQ9P2K1 1620 aa22.25■■□□□ 1.15
MCM4-209ENST00000520637 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
MCM4-209ENST00000520637 SCRIBQ14160 1630 aa22.2■■□□□ 1.15
MCM4-209ENST00000520637 EIF4G1Q04637 1599 aaKnown RBP22.14■■□□□ 1.13
MCM4-209ENST00000520637 DNAJC5Q9H3Z4 198 aa21.68■■□□□ 1.06
MCM4-209ENST00000520637 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
MCM4-209ENST00000520637 CUX2O14529 1486 aa21.37■■□□□ 1.01
MCM4-209ENST00000520637 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
MCM4-209ENST00000520637 ERCC6Q03468 1493 aa21.34■■□□□ 1.01
MCM4-209ENST00000520637 ATAD2BQ9ULI0 1458 aa21.24■□□□□ 0.99
MCM4-209ENST00000520637 SMARCA2P51531 1590 aa21.17■□□□□ 0.98
MCM4-209ENST00000520637 HMGXB3Q12766 1538 aa21.15■□□□□ 0.98
MCM4-209ENST00000520637 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
MCM4-209ENST00000520637 NESP48681 1621 aa21.11■□□□□ 0.97
MCM4-209ENST00000520637 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
MCM4-209ENST00000520637 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.95
MCM4-209ENST00000520637 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
MCM4-209ENST00000520637 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
MCM4-209ENST00000520637 LAMC3Q9Y6N6 1575 aa20.91■□□□□ 0.94
MCM4-209ENST00000520637 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.92
MCM4-209ENST00000520637 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
MCM4-209ENST00000520637 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
MCM4-209ENST00000520637 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
MCM4-209ENST00000520637 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
MCM4-209ENST00000520637 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
MCM4-209ENST00000520637 WDR62O43379 1518 aa20.59■□□□□ 0.89
MCM4-209ENST00000520637 WIZO95785 1651 aa20.57■□□□□ 0.88
MCM4-209ENST00000520637 CEP164Q9UPV0 1460 aa20.51■□□□□ 0.87
MCM4-209ENST00000520637 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
MCM4-209ENST00000520637 CFTRP13569 1480 aa20.39■□□□□ 0.85
MCM4-209ENST00000520637 OSCARQ8IYS5 282 aa20.38■□□□□ 0.85
MCM4-209ENST00000520637 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
MCM4-209ENST00000520637 URB2Q14146 1524 aaKnown RBP20.3■□□□□ 0.84
MCM4-209ENST00000520637 TOP2AP11388 1531 aaKnown RBP20.29■□□□□ 0.84
MCM4-209ENST00000520637 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
MCM4-209ENST00000520637 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
MCM4-209ENST00000520637 RIMBP3CA6NJZ7 1639 aa20.11■□□□□ 0.81
MCM4-209ENST00000520637 RIMBP3BA6NNM3 1639 aa20.11■□□□□ 0.81
MCM4-209ENST00000520637 RIMBP3Q9UFD9 1639 aa20.11■□□□□ 0.81
MCM4-209ENST00000520637 ZNF608Q9ULD9 1512 aaPredicted RBP20.1■□□□□ 0.81
MCM4-209ENST00000520637 CCDC88BA6NC98 1476 aa20.07■□□□□ 0.8
MCM4-209ENST00000520637 TOPBP1Q92547 1522 aa20.03■□□□□ 0.8
MCM4-209ENST00000520637 ARHGEF11O15085 1522 aa20.02■□□□□ 0.8
MCM4-209ENST00000520637 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
MCM4-209ENST00000520637 EIF4G3O43432 1585 aaKnown RBP19.97■□□□□ 0.79
MCM4-209ENST00000520637 DNMBPQ6XZF7 1577 aa19.94■□□□□ 0.78
MCM4-209ENST00000520637 CYB5RLQ6IPT4 315 aa19.92■□□□□ 0.78
MCM4-209ENST00000520637 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.787e-8■■■■□ 25.7
MCM4-209ENST00000520637 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
MCM4-209ENST00000520637 CHD1O14646 1710 aa19.86■□□□□ 0.77
MCM4-209ENST00000520637 FBLN2P98095 1184 aa19.86■□□□□ 0.77
MCM4-209ENST00000520637 TRHP20396 242 aaPredicted RBP19.82■□□□□ 0.76
MCM4-209ENST00000520637 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
MCM4-209ENST00000520637 ARAP1Q96P48 1450 aa19.79■□□□□ 0.76
MCM4-209ENST00000520637 RAD54L2Q9Y4B4 1467 aa19.76■□□□□ 0.75
MCM4-209ENST00000520637 TDRD9Q8NDG6 1382 aaKnown RBP19.74■□□□□ 0.75
MCM4-209ENST00000520637 SOGA1O94964 1423 aa19.74■□□□□ 0.75
MCM4-209ENST00000520637 SENP3Q9H4L4 574 aaPredicted RBP19.69■□□□□ 0.74
MCM4-209ENST00000520637 SNAPC4Q5SXM2 1469 aa19.68■□□□□ 0.74
MCM4-209ENST00000520637 CHMP7Q8WUX9 453 aaPredicted RBP19.66■□□□□ 0.74
MCM4-209ENST00000520637 FGD5Q6ZNL6 1462 aa19.66■□□□□ 0.74
MCM4-209ENST00000520637 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
MCM4-209ENST00000520637 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
MCM4-209ENST00000520637 SYNJ1O43426 1573 aa19.62■□□□□ 0.73
MCM4-209ENST00000520637 MAGI1Q96QZ7 1491 aaPredicted RBP19.61■□□□□ 0.73
MCM4-209ENST00000520637 GRIN2BQ13224 1484 aa19.6■□□□□ 0.73
MCM4-209ENST00000520637 CUX1P39880 1505 aa19.58■□□□□ 0.73
MCM4-209ENST00000520637 SYNJ2O15056 1496 aa19.56■□□□□ 0.72
MCM4-209ENST00000520637 GAPVD1Q14C86 1478 aa19.48■□□□□ 0.71
MCM4-209ENST00000520637 PBRM1Q86U86 1689 aa19.47■□□□□ 0.71
MCM4-209ENST00000520637 ABCA10Q8WWZ4 1543 aa19.41■□□□□ 0.7
MCM4-209ENST00000520637 ABCA5Q8WWZ7 1642 aa19.4■□□□□ 0.7
MCM4-209ENST00000520637 GRIN2AQ12879 1464 aa19.34■□□□□ 0.69
MCM4-209ENST00000520637 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
MCM4-209ENST00000520637 WRNQ14191 1432 aaPredicted RBP eCLIP19.3■□□□□ 0.68
MCM4-209ENST00000520637 ADAMTS12P58397 1594 aa19.27■□□□□ 0.68
MCM4-209ENST00000520637 CEP170Q5SW79 1584 aa19.27■□□□□ 0.68
MCM4-209ENST00000520637 NUP160Q12769 1436 aa19.26■□□□□ 0.67
MCM4-209ENST00000520637 PHF23Q9BUL5 403 aaPredicted RBP19.26■□□□□ 0.67
MCM4-209ENST00000520637 SUPT5HO00267 1087 aaKnown RBP19.25■□□□□ 0.67
MCM4-209ENST00000520637 FHAD1B1AJZ9 1412 aa19.23■□□□□ 0.67
MCM4-209ENST00000520637 TOP2BQ02880 1626 aa19.2■□□□□ 0.66
MCM4-209ENST00000520637 SHROOM2Q13796 1616 aa19.2■□□□□ 0.66
MCM4-209ENST00000520637 BIVM-ERCC5R4GMW8 1640 aa19.19■□□□□ 0.66
MCM4-209ENST00000520637 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms