RNA–Protein interactions for RNA: ENST00000520532.5

TRAPPC9-207, Transcript of trafficking protein particle complex 9, humanhuman

TSL 5

Gene TRAPPC9, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-207ENST00000520532 NISCHQ9Y2I1 1504 aa18.25■□□□□ 0.51
TRAPPC9-207ENST00000520532 CCDC180Q9P1Z9 1646 aa16.43■□□□□ 0.22
TRAPPC9-207ENST00000520532 ABCC9O60706 1549 aa15.72■□□□□ 0.11
TRAPPC9-207ENST00000520532 RB1CC1Q8TDY2 1594 aa15.33■□□□□ 0.05
TRAPPC9-207ENST00000520532 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.04
TRAPPC9-207ENST00000520532 NACADO15069 1562 aa15.32■□□□□ 0.04
TRAPPC9-207ENST00000520532 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.03
TRAPPC9-207ENST00000520532 DCAF1Q9Y4B6 1507 aa15.23■□□□□ 0.03
TRAPPC9-207ENST00000520532 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
TRAPPC9-207ENST00000520532 DCAF8L2P0C7V8 631 aa14.86□□□□□ -0.03
TRAPPC9-207ENST00000520532 SHROOM4Q9ULL8 1493 aa14.86□□□□□ -0.03
TRAPPC9-207ENST00000520532 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
TRAPPC9-207ENST00000520532 SCRIBQ14160 1630 aa14.77□□□□□ -0.04
TRAPPC9-207ENST00000520532 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRAPPC9-207ENST00000520532 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
TRAPPC9-207ENST00000520532 CC2D2AQ9P2K1 1620 aa14.34□□□□□ -0.11
TRAPPC9-207ENST00000520532 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
TRAPPC9-207ENST00000520532 SMARCA4P51532 1647 aa14.21□□□□□ -0.13
TRAPPC9-207ENST00000520532 BAZ1AQ9NRL2 1556 aaPredicted RBP14.21□□□□□ -0.14
TRAPPC9-207ENST00000520532 CECR2Q9BXF3 1484 aa14.18□□□□□ -0.14
TRAPPC9-207ENST00000520532 PEG3Q9GZU2 1588 aa14.15□□□□□ -0.14
TRAPPC9-207ENST00000520532 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
TRAPPC9-207ENST00000520532 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
TRAPPC9-207ENST00000520532 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
TRAPPC9-207ENST00000520532 ATAD2BQ9ULI0 1458 aa14.04□□□□□ -0.16
TRAPPC9-207ENST00000520532 MROH2BQ7Z745 1585 aa14□□□□□ -0.17
TRAPPC9-207ENST00000520532 BAZ1BQ9UIG0 1483 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-207ENST00000520532 WIZO95785 1651 aa13.88□□□□□ -0.19
TRAPPC9-207ENST00000520532 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-207ENST00000520532 TOP2AP11388 1531 aaKnown RBP13.82□□□□□ -0.2
TRAPPC9-207ENST00000520532 LAMC3Q9Y6N6 1575 aa13.79□□□□□ -0.2
TRAPPC9-207ENST00000520532 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
TRAPPC9-207ENST00000520532 KIF21AQ7Z4S6 1674 aa13.62□□□□□ -0.23
TRAPPC9-207ENST00000520532 NESP48681 1621 aa13.61□□□□□ -0.23
TRAPPC9-207ENST00000520532 THOC2Q8NI27 1593 aaKnown RBP13.6□□□□□ -0.23
TRAPPC9-207ENST00000520532 ERCC6Q03468 1493 aa13.6□□□□□ -0.23
TRAPPC9-207ENST00000520532 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.23
TRAPPC9-207ENST00000520532 CFTRP13569 1480 aa13.58□□□□□ -0.24
TRAPPC9-207ENST00000520532 PDS5BQ9NTI5 1447 aa13.57□□□□□ -0.24
TRAPPC9-207ENST00000520532 CUX2O14529 1486 aa13.57□□□□□ -0.24
TRAPPC9-207ENST00000520532 CCDC88BA6NC98 1476 aa13.52□□□□□ -0.25
TRAPPC9-207ENST00000520532 CEP164Q9UPV0 1460 aa13.49□□□□□ -0.25
TRAPPC9-207ENST00000520532 WDR62O43379 1518 aa13.49□□□□□ -0.25
TRAPPC9-207ENST00000520532 MRC2Q9UBG0 1479 aa13.47□□□□□ -0.25
TRAPPC9-207ENST00000520532 FANCD2Q9BXW9 1451 aa13.46□□□□□ -0.25
TRAPPC9-207ENST00000520532 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
TRAPPC9-207ENST00000520532 DNMBPQ6XZF7 1577 aa13.33□□□□□ -0.28
TRAPPC9-207ENST00000520532 URB2Q14146 1524 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-207ENST00000520532 TOPBP1Q92547 1522 aa13.27□□□□□ -0.29
TRAPPC9-207ENST00000520532 SUPT5HO00267 1087 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-207ENST00000520532 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
TRAPPC9-207ENST00000520532 IFT140Q96RY7 1462 aa13.21□□□□□ -0.3
TRAPPC9-207ENST00000520532 TARBP1Q13395 1621 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-207ENST00000520532 BIVM-ERCC5R4GMW8 1640 aa13.19□□□□□ -0.3
TRAPPC9-207ENST00000520532 CUX1P39880 1505 aa13.17□□□□□ -0.3
TRAPPC9-207ENST00000520532 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC9-207ENST00000520532 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
TRAPPC9-207ENST00000520532 TOP2BQ02880 1626 aa13.14□□□□□ -0.31
TRAPPC9-207ENST00000520532 FGD5Q6ZNL6 1462 aa13.11□□□□□ -0.31
TRAPPC9-207ENST00000520532 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
TRAPPC9-207ENST00000520532 WRNQ14191 1432 aaPredicted RBP eCLIP13.07□□□□□ -0.328e-10■■■■■ 68.9
TRAPPC9-207ENST00000520532 ABCA5Q8WWZ7 1642 aa13.06□□□□□ -0.32
TRAPPC9-207ENST00000520532 PBRM1Q86U86 1689 aa13.05□□□□□ -0.32
TRAPPC9-207ENST00000520532 ABCA10Q8WWZ4 1543 aa13.04□□□□□ -0.32
TRAPPC9-207ENST00000520532 ZNF608Q9ULD9 1512 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-207ENST00000520532 SOGA1O94964 1423 aa13.02□□□□□ -0.33
TRAPPC9-207ENST00000520532 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
TRAPPC9-207ENST00000520532 MAGI1Q96QZ7 1491 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC9-207ENST00000520532 CHD1O14646 1710 aa12.98□□□□□ -0.33
TRAPPC9-207ENST00000520532 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
TRAPPC9-207ENST00000520532 AQRO60306 1485 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRAPPC9-207ENST00000520532 GAPVD1Q14C86 1478 aa12.93□□□□□ -0.34
TRAPPC9-207ENST00000520532 ERICH3Q5RHP9 1530 aa12.93□□□□□ -0.34
TRAPPC9-207ENST00000520532 AEBP2Q6ZN18 517 aaPredicted RBP12.92□□□□□ -0.34
TRAPPC9-207ENST00000520532 ADAMTS12P58397 1594 aa12.91□□□□□ -0.34
TRAPPC9-207ENST00000520532 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
TRAPPC9-207ENST00000520532 DNAJC5Q9H3Z4 198 aa12.9□□□□□ -0.34
TRAPPC9-207ENST00000520532 SYNJ2O15056 1496 aa12.89□□□□□ -0.35
TRAPPC9-207ENST00000520532 CUL7Q14999 1698 aa12.88□□□□□ -0.35
TRAPPC9-207ENST00000520532 TDRD9Q8NDG6 1382 aaKnown RBP12.87□□□□□ -0.35
TRAPPC9-207ENST00000520532 CLASP1Q7Z460 1538 aa12.83□□□□□ -0.35
TRAPPC9-207ENST00000520532 KIF27Q86VH2 1401 aa12.8□□□□□ -0.36
TRAPPC9-207ENST00000520532 GRIN2AQ12879 1464 aa12.8□□□□□ -0.36
TRAPPC9-207ENST00000520532 FHAD1B1AJZ9 1412 aa12.79□□□□□ -0.36
TRAPPC9-207ENST00000520532 OSCARQ8IYS5 282 aa12.79□□□□□ -0.36
TRAPPC9-207ENST00000520532 RIMBP3CA6NJZ7 1639 aa12.75□□□□□ -0.37
TRAPPC9-207ENST00000520532 RIMBP3BA6NNM3 1639 aa12.75□□□□□ -0.37
TRAPPC9-207ENST00000520532 NUP160Q12769 1436 aa12.75□□□□□ -0.37
TRAPPC9-207ENST00000520532 RUSC2Q8N2Y8 1516 aa12.75□□□□□ -0.37
TRAPPC9-207ENST00000520532 RIMBP3Q9UFD9 1639 aa12.75□□□□□ -0.37
TRAPPC9-207ENST00000520532 SHROOM2Q13796 1616 aa12.74□□□□□ -0.37
TRAPPC9-207ENST00000520532 CEP170Q5SW79 1584 aa12.74□□□□□ -0.37
TRAPPC9-207ENST00000520532 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
TRAPPC9-207ENST00000520532 CHMP7Q8WUX9 453 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC9-207ENST00000520532 EEA1Q15075 1411 aa12.65□□□□□ -0.38
TRAPPC9-207ENST00000520532 CTTNBP2Q8WZ74 1663 aa12.65□□□□□ -0.38
TRAPPC9-207ENST00000520532 FBLN2P98095 1184 aa12.65□□□□□ -0.38
TRAPPC9-207ENST00000520532 CHIC1Q5VXU3 224 aa12.65□□□□□ -0.38
TRAPPC9-207ENST00000520532 IGF1RP08069 1367 aa12.65□□□□□ -0.38
TRAPPC9-207ENST00000520532 ARAP1Q96P48 1450 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms