RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 AEBP2Q6ZN18 517 aaPredicted RBP27.96■■■□□ 2.07
IGHV1-17-201ENST00000520119 CHIC1Q5VXU3 224 aa27.56■■■□□ 2
IGHV1-17-201ENST00000520119 NISCHQ9Y2I1 1504 aa27.49■■□□□ 1.99
IGHV1-17-201ENST00000520119 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.53
IGHV1-17-201ENST00000520119 ABCC9O60706 1549 aa24.55■■□□□ 1.52
IGHV1-17-201ENST00000520119 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
IGHV1-17-201ENST00000520119 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
IGHV1-17-201ENST00000520119 RB1CC1Q8TDY2 1594 aa23.43■■□□□ 1.34
IGHV1-17-201ENST00000520119 NACADO15069 1562 aa23.29■■□□□ 1.32
IGHV1-17-201ENST00000520119 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
IGHV1-17-201ENST00000520119 MYO15BQ96JP2 1530 aa23.02■■□□□ 1.28
IGHV1-17-201ENST00000520119 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
IGHV1-17-201ENST00000520119 PABPN1Q86U42 306 aaKnown RBP eCLIP22.87■■□□□ 1.25
IGHV1-17-201ENST00000520119 UNC13AQ9UPW8 1703 aa22.85■■□□□ 1.25
IGHV1-17-201ENST00000520119 ZCCHC6Q5VYS8 1495 aaKnown RBP22.79■■□□□ 1.24
IGHV1-17-201ENST00000520119 DCAF1Q9Y4B6 1507 aa22.73■■□□□ 1.23
IGHV1-17-201ENST00000520119 BICRAQ9NZM4 1560 aa22.71■■□□□ 1.23
IGHV1-17-201ENST00000520119 PLPPR3Q6T4P5 718 aa22.52■■□□□ 1.2
IGHV1-17-201ENST00000520119 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
IGHV1-17-201ENST00000520119 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
IGHV1-17-201ENST00000520119 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
IGHV1-17-201ENST00000520119 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
IGHV1-17-201ENST00000520119 CECR2Q9BXF3 1484 aa22.12■■□□□ 1.13
IGHV1-17-201ENST00000520119 FOXD1Q16676 465 aa21.93■■□□□ 1.1
IGHV1-17-201ENST00000520119 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
IGHV1-17-201ENST00000520119 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
IGHV1-17-201ENST00000520119 SMARCA4P51532 1647 aa21.41■■□□□ 1.02
IGHV1-17-201ENST00000520119 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
IGHV1-17-201ENST00000520119 ADRA2BP18089 450 aa21.36■■□□□ 1.01
IGHV1-17-201ENST00000520119 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
IGHV1-17-201ENST00000520119 BAZ1AQ9NRL2 1556 aaPredicted RBP21.34■■□□□ 1.01
IGHV1-17-201ENST00000520119 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
IGHV1-17-201ENST00000520119 BAZ1BQ9UIG0 1483 aaKnown RBP21.23■□□□□ 0.99
IGHV1-17-201ENST00000520119 PEG3Q9GZU2 1588 aa21.23■□□□□ 0.99
IGHV1-17-201ENST00000520119 ERCC6Q03468 1493 aa21.21■□□□□ 0.99
IGHV1-17-201ENST00000520119 MROH2BQ7Z745 1585 aa21.16■□□□□ 0.98
IGHV1-17-201ENST00000520119 CUX2O14529 1486 aa21.16■□□□□ 0.98
IGHV1-17-201ENST00000520119 NESP48681 1621 aa21.09■□□□□ 0.97
IGHV1-17-201ENST00000520119 DNAJC5Q9H3Z4 198 aa21.08■□□□□ 0.97
IGHV1-17-201ENST00000520119 LAMC3Q9Y6N6 1575 aa21■□□□□ 0.95
IGHV1-17-201ENST00000520119 WIZO95785 1651 aa20.89■□□□□ 0.94
IGHV1-17-201ENST00000520119 PDS5BQ9NTI5 1447 aa20.89■□□□□ 0.94
IGHV1-17-201ENST00000520119 THOC2Q8NI27 1593 aaKnown RBP20.87■□□□□ 0.93
IGHV1-17-201ENST00000520119 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
IGHV1-17-201ENST00000520119 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.92
IGHV1-17-201ENST00000520119 RSF1Q96T23 1441 aaPredicted RBP20.77■□□□□ 0.91
IGHV1-17-201ENST00000520119 PIAS4Q8N2W9 510 aaPredicted RBP20.76■□□□□ 0.91
IGHV1-17-201ENST00000520119 MRC2Q9UBG0 1479 aa20.69■□□□□ 0.9
IGHV1-17-201ENST00000520119 TOP2AP11388 1531 aaKnown RBP20.66■□□□□ 0.9
IGHV1-17-201ENST00000520119 WDR62O43379 1518 aa20.63■□□□□ 0.89
IGHV1-17-201ENST00000520119 CFTRP13569 1480 aa20.62■□□□□ 0.89
IGHV1-17-201ENST00000520119 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
IGHV1-17-201ENST00000520119 FANCD2Q9BXW9 1451 aa20.6■□□□□ 0.89
IGHV1-17-201ENST00000520119 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
IGHV1-17-201ENST00000520119 URB2Q14146 1524 aaKnown RBP20.41■□□□□ 0.86
IGHV1-17-201ENST00000520119 PRDM2Q13029 1718 aa20.4■□□□□ 0.86
IGHV1-17-201ENST00000520119 OSCARQ8IYS5 282 aa20.23■□□□□ 0.83
IGHV1-17-201ENST00000520119 ABCC8Q09428 1581 aa20.22■□□□□ 0.83
IGHV1-17-201ENST00000520119 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
IGHV1-17-201ENST00000520119 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
IGHV1-17-201ENST00000520119 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
IGHV1-17-201ENST00000520119 DNMBPQ6XZF7 1577 aa20.15■□□□□ 0.82
IGHV1-17-201ENST00000520119 ZNF608Q9ULD9 1512 aaPredicted RBP20.14■□□□□ 0.81
IGHV1-17-201ENST00000520119 MSH5O43196 834 aa20.06■□□□□ 0.8
IGHV1-17-201ENST00000520119 EIF4G3O43432 1585 aaKnown RBP20.03■□□□□ 0.8
IGHV1-17-201ENST00000520119 TARBP1Q13395 1621 aaKnown RBP20.02■□□□□ 0.8
IGHV1-17-201ENST00000520119 POLA1P09884 1462 aaPredicted RBP20.01■□□□□ 0.79
IGHV1-17-201ENST00000520119 AQRO60306 1485 aaKnown RBP eCLIP19.98■□□□□ 0.79
IGHV1-17-201ENST00000520119 SOGA1O94964 1423 aa19.93■□□□□ 0.78
IGHV1-17-201ENST00000520119 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
IGHV1-17-201ENST00000520119 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
IGHV1-17-201ENST00000520119 PPP4R3CPQ6ZMV5 832 aa19.9■□□□□ 0.78
IGHV1-17-201ENST00000520119 RIMBP3CA6NJZ7 1639 aa19.9■□□□□ 0.78
IGHV1-17-201ENST00000520119 RIMBP3BA6NNM3 1639 aa19.9■□□□□ 0.78
IGHV1-17-201ENST00000520119 RIMBP3Q9UFD9 1639 aa19.9■□□□□ 0.78
IGHV1-17-201ENST00000520119 FGD5Q6ZNL6 1462 aa19.89■□□□□ 0.77
IGHV1-17-201ENST00000520119 CUX1P39880 1505 aa19.87■□□□□ 0.77
IGHV1-17-201ENST00000520119 TDRD9Q8NDG6 1382 aaKnown RBP19.87■□□□□ 0.77
IGHV1-17-201ENST00000520119 CHD1O14646 1710 aa19.86■□□□□ 0.77
IGHV1-17-201ENST00000520119 WDR97A6NE52 1622 aa19.86■□□□□ 0.77
IGHV1-17-201ENST00000520119 ARHGEF11O15085 1522 aa19.86■□□□□ 0.77
IGHV1-17-201ENST00000520119 FBLN2P98095 1184 aa19.85■□□□□ 0.77
IGHV1-17-201ENST00000520119 KCNA4P22459 653 aa19.8■□□□□ 0.76
IGHV1-17-201ENST00000520119 SNAPC4Q5SXM2 1469 aa19.77■□□□□ 0.76
IGHV1-17-201ENST00000520119 GRIN2BQ13224 1484 aa19.76■□□□□ 0.75
IGHV1-17-201ENST00000520119 MAGI1Q96QZ7 1491 aaPredicted RBP19.75■□□□□ 0.75
IGHV1-17-201ENST00000520119 CHMP7Q8WUX9 453 aaPredicted RBP19.74■□□□□ 0.75
IGHV1-17-201ENST00000520119 CYB5RLQ6IPT4 315 aa19.73■□□□□ 0.75
IGHV1-17-201ENST00000520119 GAPVD1Q14C86 1478 aa19.69■□□□□ 0.74
IGHV1-17-201ENST00000520119 ABCA10Q8WWZ4 1543 aa19.69■□□□□ 0.74
IGHV1-17-201ENST00000520119 SYNJ2O15056 1496 aa19.68■□□□□ 0.74
IGHV1-17-201ENST00000520119 SYNJ1O43426 1573 aa19.67■□□□□ 0.74
IGHV1-17-201ENST00000520119 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
IGHV1-17-201ENST00000520119 CLASP1Q7Z460 1538 aa19.65■□□□□ 0.74
IGHV1-17-201ENST00000520119 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
IGHV1-17-201ENST00000520119 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
IGHV1-17-201ENST00000520119 ABCA5Q8WWZ7 1642 aa19.63■□□□□ 0.73
IGHV1-17-201ENST00000520119 TOP2BQ02880 1626 aa19.59■□□□□ 0.73
IGHV1-17-201ENST00000520119 BIVM-ERCC5R4GMW8 1640 aa19.58■□□□□ 0.73
IGHV1-17-201ENST00000520119 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms