RNA–Protein interactions for RNA: ENST00000519966.5

RMDN1-212, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 2 BASIC

Gene RMDN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-212ENST00000519966 NISCHQ9Y2I1 1504 aa37.66■■■■□ 3.62
RMDN1-212ENST00000519966 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
RMDN1-212ENST00000519966 AEBP2Q6ZN18 517 aaPredicted RBP33.3■■■□□ 2.92
RMDN1-212ENST00000519966 ABCC9O60706 1549 aa33.22■■■□□ 2.91
RMDN1-212ENST00000519966 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
RMDN1-212ENST00000519966 NACADO15069 1562 aa31.73■■■□□ 2.67
RMDN1-212ENST00000519966 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.63
RMDN1-212ENST00000519966 DCAF8L2P0C7V8 631 aa31.45■■■□□ 2.63
RMDN1-212ENST00000519966 ZCCHC6Q5VYS8 1495 aaKnown RBP31.32■■■□□ 2.6
RMDN1-212ENST00000519966 UNC13AQ9UPW8 1703 aa31.21■■■□□ 2.59
RMDN1-212ENST00000519966 DCAF1Q9Y4B6 1507 aa31.19■■■□□ 2.58
RMDN1-212ENST00000519966 CHIC1Q5VXU3 224 aa30.97■■■□□ 2.55
RMDN1-212ENST00000519966 BICRAQ9NZM4 1560 aa30.93■■■□□ 2.54
RMDN1-212ENST00000519966 PABPN1Q86U42 306 aaKnown RBP eCLIP30.92■■■□□ 2.54
RMDN1-212ENST00000519966 DNAJC5BQ9UF47 199 aa30.81■■■□□ 2.52
RMDN1-212ENST00000519966 SCRIBQ14160 1630 aa30.66■■■□□ 2.5
RMDN1-212ENST00000519966 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
RMDN1-212ENST00000519966 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
RMDN1-212ENST00000519966 CC2D2AQ9P2K1 1620 aa30.08■■■□□ 2.41
RMDN1-212ENST00000519966 CECR2Q9BXF3 1484 aa29.89■■■□□ 2.38
RMDN1-212ENST00000519966 SMARCA4P51532 1647 aa29.33■■■□□ 2.29
RMDN1-212ENST00000519966 NCAPD3P42695 1498 aa29.26■■■□□ 2.27
RMDN1-212ENST00000519966 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
RMDN1-212ENST00000519966 BAZ1AQ9NRL2 1556 aaPredicted RBP29.22■■■□□ 2.27
RMDN1-212ENST00000519966 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
RMDN1-212ENST00000519966 HMGXB3Q12766 1538 aa29.13■■■□□ 2.25
RMDN1-212ENST00000519966 PEG3Q9GZU2 1588 aa29.07■■■□□ 2.24
RMDN1-212ENST00000519966 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.24
RMDN1-212ENST00000519966 BAZ1BQ9UIG0 1483 aaKnown RBP28.95■■■□□ 2.22
RMDN1-212ENST00000519966 WIZO95785 1651 aa28.7■■■□□ 2.19
RMDN1-212ENST00000519966 NESP48681 1621 aa28.66■■■□□ 2.18
RMDN1-212ENST00000519966 ERCC6Q03468 1493 aa28.64■■■□□ 2.17
RMDN1-212ENST00000519966 LAMC3Q9Y6N6 1575 aa28.57■■■□□ 2.16
RMDN1-212ENST00000519966 RSF1Q96T23 1441 aaPredicted RBP28.53■■■□□ 2.16
RMDN1-212ENST00000519966 CUX2O14529 1486 aa28.53■■■□□ 2.16
RMDN1-212ENST00000519966 SENP3Q9H4L4 574 aaPredicted RBP28.45■■■□□ 2.14
RMDN1-212ENST00000519966 TOP2AP11388 1531 aaKnown RBP28.38■■■□□ 2.13
RMDN1-212ENST00000519966 THOC2Q8NI27 1593 aaKnown RBP28.37■■■□□ 2.13
RMDN1-212ENST00000519966 KIF21AQ7Z4S6 1674 aa28.37■■■□□ 2.13
RMDN1-212ENST00000519966 CADPSQ9ULU8 1353 aa28.37■■■□□ 2.13
RMDN1-212ENST00000519966 PDS5BQ9NTI5 1447 aa28.33■■■□□ 2.13
RMDN1-212ENST00000519966 CFTRP13569 1480 aa28.15■■■□□ 2.1
RMDN1-212ENST00000519966 MRC2Q9UBG0 1479 aa28.09■■■□□ 2.09
RMDN1-212ENST00000519966 WDR62O43379 1518 aa28.05■■■□□ 2.08
RMDN1-212ENST00000519966 FANCD2Q9BXW9 1451 aa28.05■■■□□ 2.08
RMDN1-212ENST00000519966 CEP164Q9UPV0 1460 aa28.05■■■□□ 2.08
RMDN1-212ENST00000519966 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
RMDN1-212ENST00000519966 CCDC88BA6NC98 1476 aa28.02■■■□□ 2.08
RMDN1-212ENST00000519966 PRDM2Q13029 1718 aa28.01■■■□□ 2.07
RMDN1-212ENST00000519966 PHF23Q9BUL5 403 aaPredicted RBP27.99■■■□□ 2.07
RMDN1-212ENST00000519966 URB2Q14146 1524 aaKnown RBP27.82■■■□□ 2.04
RMDN1-212ENST00000519966 TOPBP1Q92547 1522 aa27.58■■■□□ 2.01
RMDN1-212ENST00000519966 ABCC8Q09428 1581 aa27.54■■■□□ 2
RMDN1-212ENST00000519966 DNMBPQ6XZF7 1577 aa27.53■■■□□ 2
RMDN1-212ENST00000519966 IFT140Q96RY7 1462 aa27.48■■□□□ 1.99
RMDN1-212ENST00000519966 SUPT5HO00267 1087 aaKnown RBP27.43■■□□□ 1.98
RMDN1-212ENST00000519966 ZNF608Q9ULD9 1512 aaPredicted RBP27.4■■□□□ 1.98
RMDN1-212ENST00000519966 TARBP1Q13395 1621 aaKnown RBP27.34■■□□□ 1.97
RMDN1-212ENST00000519966 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
RMDN1-212ENST00000519966 EIF4G3O43432 1585 aaKnown RBP27.31■■□□□ 1.96
RMDN1-212ENST00000519966 CUX1P39880 1505 aa27.25■■□□□ 1.95
RMDN1-212ENST00000519966 OSCARQ8IYS5 282 aa27.2■■□□□ 1.94
RMDN1-212ENST00000519966 FGD5Q6ZNL6 1462 aa27.19■■□□□ 1.94
RMDN1-212ENST00000519966 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
RMDN1-212ENST00000519966 SOGA1O94964 1423 aa27.16■■□□□ 1.94
RMDN1-212ENST00000519966 AQRO60306 1485 aaKnown RBP eCLIP27.16■■□□□ 1.94
RMDN1-212ENST00000519966 WDR97A6NE52 1622 aa27.12■■□□□ 1.93
RMDN1-212ENST00000519966 CHD1O14646 1710 aa27.05■■□□□ 1.92
RMDN1-212ENST00000519966 TDRD9Q8NDG6 1382 aaKnown RBP27.04■■□□□ 1.92
RMDN1-212ENST00000519966 BIVM-ERCC5R4GMW8 1640 aa26.96■■□□□ 1.91
RMDN1-212ENST00000519966 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
RMDN1-212ENST00000519966 ABCA10Q8WWZ4 1543 aa26.93■■□□□ 1.9
RMDN1-212ENST00000519966 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
RMDN1-212ENST00000519966 GRIN2BQ13224 1484 aa26.91■■□□□ 1.9
RMDN1-212ENST00000519966 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
RMDN1-212ENST00000519966 PBRM1Q86U86 1689 aa26.9■■□□□ 1.9
RMDN1-212ENST00000519966 RIMBP3CA6NJZ7 1639 aa26.9■■□□□ 1.9
RMDN1-212ENST00000519966 RIMBP3BA6NNM3 1639 aa26.9■■□□□ 1.9
RMDN1-212ENST00000519966 ABCA5Q8WWZ7 1642 aa26.9■■□□□ 1.9
RMDN1-212ENST00000519966 RIMBP3Q9UFD9 1639 aa26.9■■□□□ 1.9
RMDN1-212ENST00000519966 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
RMDN1-212ENST00000519966 MAGI1Q96QZ7 1491 aaPredicted RBP26.89■■□□□ 1.9
RMDN1-212ENST00000519966 TRIM41Q8WV44 630 aa26.87■■□□□ 1.89
RMDN1-212ENST00000519966 GAPVD1Q14C86 1478 aa26.86■■□□□ 1.89
RMDN1-212ENST00000519966 ARHGEF11O15085 1522 aa26.84■■□□□ 1.89
RMDN1-212ENST00000519966 FBLN2P98095 1184 aa26.82■■□□□ 1.88
RMDN1-212ENST00000519966 SYNJ2O15056 1496 aa26.79■■□□□ 1.88
RMDN1-212ENST00000519966 CLASP1Q7Z460 1538 aa26.74■■□□□ 1.87
RMDN1-212ENST00000519966 CHMP7Q8WUX9 453 aaPredicted RBP26.72■■□□□ 1.87
RMDN1-212ENST00000519966 FOXD1Q16676 465 aa26.71■■□□□ 1.87
RMDN1-212ENST00000519966 ADAMTS12P58397 1594 aa26.64■■□□□ 1.86
RMDN1-212ENST00000519966 ERICH3Q5RHP9 1530 aa26.6■■□□□ 1.85
RMDN1-212ENST00000519966 ARAP1Q96P48 1450 aa26.6■■□□□ 1.85
RMDN1-212ENST00000519966 GRIN2AQ12879 1464 aa26.57■■□□□ 1.84
RMDN1-212ENST00000519966 FHAD1B1AJZ9 1412 aa26.54■■□□□ 1.84
RMDN1-212ENST00000519966 CYB5RLQ6IPT4 315 aa26.51■■□□□ 1.83
RMDN1-212ENST00000519966 NUP160Q12769 1436 aa26.48■■□□□ 1.83
RMDN1-212ENST00000519966 CEP170Q5SW79 1584 aa26.48■■□□□ 1.83
RMDN1-212ENST00000519966 POTEDQ86YR6 584 aa26.45■■□□□ 1.82
RMDN1-212ENST00000519966 SHROOM2Q13796 1616 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms