RNA–Protein interactions for RNA: ENST00000518888.1

GABRA6-203, Transcript of gamma-aminobutyric acid type A receptor alpha6 subunit, humanhuman

TSL 4

Gene GABRA6, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA6-203ENST00000518888 NISCHQ9Y2I1 1504 aa20.6■□□□□ 0.89
GABRA6-203ENST00000518888 CCDC180Q9P1Z9 1646 aa18.6■□□□□ 0.57
GABRA6-203ENST00000518888 ABCC9O60706 1549 aa18.43■□□□□ 0.54
GABRA6-203ENST00000518888 AEBP2Q6ZN18 517 aaPredicted RBP17.97■□□□□ 0.47
GABRA6-203ENST00000518888 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
GABRA6-203ENST00000518888 NACADO15069 1562 aa17.58■□□□□ 0.41
GABRA6-203ENST00000518888 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
GABRA6-203ENST00000518888 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
GABRA6-203ENST00000518888 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
GABRA6-203ENST00000518888 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
GABRA6-203ENST00000518888 DCAF8L2P0C7V8 631 aa17.2■□□□□ 0.34
GABRA6-203ENST00000518888 DCAF1Q9Y4B6 1507 aa17.14■□□□□ 0.33
GABRA6-203ENST00000518888 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
GABRA6-203ENST00000518888 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
GABRA6-203ENST00000518888 SHROOM4Q9ULL8 1493 aa17.08■□□□□ 0.32
GABRA6-203ENST00000518888 ZCCHC6Q5VYS8 1495 aaKnown RBP17.06■□□□□ 0.32
GABRA6-203ENST00000518888 SCRIBQ14160 1630 aa16.76■□□□□ 0.27
GABRA6-203ENST00000518888 CC2D2AQ9P2K1 1620 aa16.72■□□□□ 0.27
GABRA6-203ENST00000518888 EIF4G1Q04637 1599 aaKnown RBP16.7■□□□□ 0.26
GABRA6-203ENST00000518888 CECR2Q9BXF3 1484 aa16.67■□□□□ 0.26
GABRA6-203ENST00000518888 NCAPD3P42695 1498 aa16.21■□□□□ 0.19
GABRA6-203ENST00000518888 SMARCA2P51531 1590 aa16.11■□□□□ 0.17
GABRA6-203ENST00000518888 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
GABRA6-203ENST00000518888 ATAD2BQ9ULI0 1458 aa16.09■□□□□ 0.17
GABRA6-203ENST00000518888 SMARCA4P51532 1647 aa16.08■□□□□ 0.16
GABRA6-203ENST00000518888 CUX2O14529 1486 aa16.07■□□□□ 0.16
GABRA6-203ENST00000518888 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
GABRA6-203ENST00000518888 DNAJC5Q9H3Z4 198 aa16.03■□□□□ 0.16
GABRA6-203ENST00000518888 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
GABRA6-203ENST00000518888 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
GABRA6-203ENST00000518888 BAZ1BQ9UIG0 1483 aaKnown RBP15.93■□□□□ 0.14
GABRA6-203ENST00000518888 LAMC3Q9Y6N6 1575 aa15.87■□□□□ 0.13
GABRA6-203ENST00000518888 NESP48681 1621 aa15.8■□□□□ 0.12
GABRA6-203ENST00000518888 MROH2BQ7Z745 1585 aa15.79■□□□□ 0.12
GABRA6-203ENST00000518888 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
GABRA6-203ENST00000518888 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
GABRA6-203ENST00000518888 CADPSQ9ULU8 1353 aa15.67■□□□□ 0.1
GABRA6-203ENST00000518888 KIF21AQ7Z4S6 1674 aa15.67■□□□□ 0.1
GABRA6-203ENST00000518888 WIZO95785 1651 aa15.6■□□□□ 0.09
GABRA6-203ENST00000518888 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
GABRA6-203ENST00000518888 WDR62O43379 1518 aa15.57■□□□□ 0.08
GABRA6-203ENST00000518888 CEP164Q9UPV0 1460 aa15.51■□□□□ 0.07
GABRA6-203ENST00000518888 CFTRP13569 1480 aa15.5■□□□□ 0.07
GABRA6-203ENST00000518888 RSF1Q96T23 1441 aaPredicted RBP15.49■□□□□ 0.07
GABRA6-203ENST00000518888 TOP2AP11388 1531 aaKnown RBP15.48■□□□□ 0.07
GABRA6-203ENST00000518888 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.07
GABRA6-203ENST00000518888 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
GABRA6-203ENST00000518888 URB2Q14146 1524 aaKnown RBP15.32■□□□□ 0.04
GABRA6-203ENST00000518888 PHF23Q9BUL5 403 aaPredicted RBP15.3■□□□□ 0.04
GABRA6-203ENST00000518888 OSCARQ8IYS5 282 aa15.26■□□□□ 0.03
GABRA6-203ENST00000518888 ABCC8Q09428 1581 aa15.26■□□□□ 0.03
GABRA6-203ENST00000518888 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
GABRA6-203ENST00000518888 IFT140Q96RY7 1462 aa15.22■□□□□ 0.03
GABRA6-203ENST00000518888 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
GABRA6-203ENST00000518888 TRIM41Q8WV44 630 aa15.15■□□□□ 0.02
GABRA6-203ENST00000518888 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
GABRA6-203ENST00000518888 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
GABRA6-203ENST00000518888 EIF4G3O43432 1585 aaKnown RBP15.07■□□□□ 0
GABRA6-203ENST00000518888 TARBP1Q13395 1621 aaKnown RBP15.06■□□□□ 0
GABRA6-203ENST00000518888 WDR97A6NE52 1622 aa15.05■□□□□ -0
GABRA6-203ENST00000518888 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
GABRA6-203ENST00000518888 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
GABRA6-203ENST00000518888 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
GABRA6-203ENST00000518888 SENP3Q9H4L4 574 aaPredicted RBP15.03■□□□□ -0
GABRA6-203ENST00000518888 POLA1P09884 1462 aaPredicted RBP15.01□□□□□ -0.01
GABRA6-203ENST00000518888 ARHGEF11O15085 1522 aa14.99□□□□□ -0.01
GABRA6-203ENST00000518888 CHD1O14646 1710 aa14.95□□□□□ -0.02
GABRA6-203ENST00000518888 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.02
GABRA6-203ENST00000518888 SOGA1O94964 1423 aa14.93□□□□□ -0.02
GABRA6-203ENST00000518888 MAGI1Q96QZ7 1491 aaPredicted RBP14.89□□□□□ -0.03
GABRA6-203ENST00000518888 FGD5Q6ZNL6 1462 aa14.89□□□□□ -0.03
GABRA6-203ENST00000518888 RAD54L2Q9Y4B4 1467 aa14.87□□□□□ -0.03
GABRA6-203ENST00000518888 CUX1P39880 1505 aa14.86□□□□□ -0.03
GABRA6-203ENST00000518888 GRIN2BQ13224 1484 aa14.85□□□□□ -0.03
GABRA6-203ENST00000518888 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
GABRA6-203ENST00000518888 CLASP1Q7Z460 1538 aa14.83□□□□□ -0.04
GABRA6-203ENST00000518888 SYNJ1O43426 1573 aa14.83□□□□□ -0.04
GABRA6-203ENST00000518888 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
GABRA6-203ENST00000518888 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
GABRA6-203ENST00000518888 SYNJ2O15056 1496 aa14.82□□□□□ -0.04
GABRA6-203ENST00000518888 FBLN2P98095 1184 aa14.81□□□□□ -0.04
GABRA6-203ENST00000518888 CYB5RLQ6IPT4 315 aa14.81□□□□□ -0.04
GABRA6-203ENST00000518888 CHMP7Q8WUX9 453 aaPredicted RBP14.79□□□□□ -0.04
GABRA6-203ENST00000518888 ABCA10Q8WWZ4 1543 aa14.78□□□□□ -0.04
GABRA6-203ENST00000518888 PBRM1Q86U86 1689 aa14.77□□□□□ -0.05
GABRA6-203ENST00000518888 GAPVD1Q14C86 1478 aa14.76□□□□□ -0.05
GABRA6-203ENST00000518888 ABCA5Q8WWZ7 1642 aa14.75□□□□□ -0.05
GABRA6-203ENST00000518888 WRNQ14191 1432 aaPredicted RBP eCLIP14.71□□□□□ -0.05
GABRA6-203ENST00000518888 BIVM-ERCC5R4GMW8 1640 aa14.69□□□□□ -0.06
GABRA6-203ENST00000518888 TOP2BQ02880 1626 aa14.68□□□□□ -0.06
GABRA6-203ENST00000518888 TRHP20396 242 aaPredicted RBP14.65□□□□□ -0.06
GABRA6-203ENST00000518888 GRIN2AQ12879 1464 aa14.64□□□□□ -0.07
GABRA6-203ENST00000518888 ERICH3Q5RHP9 1530 aa14.62□□□□□ -0.07
GABRA6-203ENST00000518888 ADAMTS12P58397 1594 aa14.62□□□□□ -0.07
GABRA6-203ENST00000518888 NUP160Q12769 1436 aa14.62□□□□□ -0.07
GABRA6-203ENST00000518888 SUPT5HO00267 1087 aaKnown RBP14.61□□□□□ -0.07
GABRA6-203ENST00000518888 FHAD1B1AJZ9 1412 aa14.6□□□□□ -0.07
GABRA6-203ENST00000518888 SHROOM2Q13796 1616 aa14.58□□□□□ -0.08
GABRA6-203ENST00000518888 CEP170Q5SW79 1584 aa14.56□□□□□ -0.08
GABRA6-203ENST00000518888 ERCC6L2Q5T890 1561 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms