RNA–Protein interactions for RNA: ENST00000518255.5

MSRA-205, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 5 BASIC

Gene MSRA, Length 674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-205ENST00000518255 NISCHQ9Y2I1 1504 aa23.05■■□□□ 1.28
MSRA-205ENST00000518255 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
MSRA-205ENST00000518255 ABCC9O60706 1549 aa20.47■□□□□ 0.87
MSRA-205ENST00000518255 RB1CC1Q8TDY2 1594 aa19.65■□□□□ 0.74
MSRA-205ENST00000518255 NACADO15069 1562 aa19.56■□□□□ 0.72
MSRA-205ENST00000518255 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
MSRA-205ENST00000518255 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
MSRA-205ENST00000518255 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
MSRA-205ENST00000518255 ZCCHC6Q5VYS8 1495 aaKnown RBP19.12■□□□□ 0.65
MSRA-205ENST00000518255 UNC13AQ9UPW8 1703 aa19.11■□□□□ 0.65
MSRA-205ENST00000518255 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
MSRA-205ENST00000518255 AEBP2Q6ZN18 517 aaPredicted RBP19.06■□□□□ 0.64
MSRA-205ENST00000518255 PABPN1Q86U42 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
MSRA-205ENST00000518255 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
MSRA-205ENST00000518255 SHROOM4Q9ULL8 1493 aa18.94■□□□□ 0.62
MSRA-205ENST00000518255 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
MSRA-205ENST00000518255 SCRIBQ14160 1630 aa18.72■□□□□ 0.59
MSRA-205ENST00000518255 CC2D2AQ9P2K1 1620 aa18.55■□□□□ 0.56
MSRA-205ENST00000518255 EIF4G1Q04637 1599 aaKnown RBP18.55■□□□□ 0.56
MSRA-205ENST00000518255 CECR2Q9BXF3 1484 aa18.49■□□□□ 0.55
MSRA-205ENST00000518255 NCAPD3P42695 1498 aa18.05■□□□□ 0.48
MSRA-205ENST00000518255 SMARCA2P51531 1590 aa17.96■□□□□ 0.46
MSRA-205ENST00000518255 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
MSRA-205ENST00000518255 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
MSRA-205ENST00000518255 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
MSRA-205ENST00000518255 BAZ1AQ9NRL2 1556 aaPredicted RBP17.91■□□□□ 0.46
MSRA-205ENST00000518255 CHIC1Q5VXU3 224 aa17.91■□□□□ 0.46
MSRA-205ENST00000518255 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
MSRA-205ENST00000518255 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.44
MSRA-205ENST00000518255 CUX2O14529 1486 aa17.75■□□□□ 0.43
MSRA-205ENST00000518255 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
MSRA-205ENST00000518255 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
MSRA-205ENST00000518255 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
MSRA-205ENST00000518255 NESP48681 1621 aa17.59■□□□□ 0.41
MSRA-205ENST00000518255 DNAJC5Q9H3Z4 198 aa17.59■□□□□ 0.41
MSRA-205ENST00000518255 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.4
MSRA-205ENST00000518255 CADPSQ9ULU8 1353 aa17.48■□□□□ 0.39
MSRA-205ENST00000518255 THOC2Q8NI27 1593 aaKnown RBP17.47■□□□□ 0.39
MSRA-205ENST00000518255 WIZO95785 1651 aa17.47■□□□□ 0.39
MSRA-205ENST00000518255 KIF21AQ7Z4S6 1674 aa17.4■□□□□ 0.38
MSRA-205ENST00000518255 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.38
MSRA-205ENST00000518255 TOP2AP11388 1531 aaKnown RBP17.34■□□□□ 0.37
MSRA-205ENST00000518255 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
MSRA-205ENST00000518255 CFTRP13569 1480 aa17.3■□□□□ 0.36
MSRA-205ENST00000518255 WDR62O43379 1518 aa17.29■□□□□ 0.36
MSRA-205ENST00000518255 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.36
MSRA-205ENST00000518255 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
MSRA-205ENST00000518255 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
MSRA-205ENST00000518255 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
MSRA-205ENST00000518255 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
MSRA-205ENST00000518255 ABCC8Q09428 1581 aa17■□□□□ 0.31
MSRA-205ENST00000518255 IFT140Q96RY7 1462 aa16.95■□□□□ 0.3
MSRA-205ENST00000518255 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
MSRA-205ENST00000518255 OSCARQ8IYS5 282 aa16.9■□□□□ 0.3
MSRA-205ENST00000518255 DNMBPQ6XZF7 1577 aa16.89■□□□□ 0.3
MSRA-205ENST00000518255 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
MSRA-205ENST00000518255 TARBP1Q13395 1621 aaKnown RBP16.77■□□□□ 0.27
MSRA-205ENST00000518255 EIF4G3O43432 1585 aaKnown RBP16.77■□□□□ 0.27
MSRA-205ENST00000518255 POLA1P09884 1462 aaPredicted RBP16.75■□□□□ 0.27
MSRA-205ENST00000518255 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
MSRA-205ENST00000518255 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
MSRA-205ENST00000518255 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
MSRA-205ENST00000518255 SOGA1O94964 1423 aa16.69■□□□□ 0.26
MSRA-205ENST00000518255 AQRO60306 1485 aaKnown RBP eCLIP16.68■□□□□ 0.26
MSRA-205ENST00000518255 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
MSRA-205ENST00000518255 RAD54L2Q9Y4B4 1467 aa16.63■□□□□ 0.25
MSRA-205ENST00000518255 CUX1P39880 1505 aa16.63■□□□□ 0.25
MSRA-205ENST00000518255 RIMBP3CA6NJZ7 1639 aa16.63■□□□□ 0.25
MSRA-205ENST00000518255 RIMBP3BA6NNM3 1639 aa16.63■□□□□ 0.25
MSRA-205ENST00000518255 RIMBP3Q9UFD9 1639 aa16.63■□□□□ 0.25
MSRA-205ENST00000518255 CHD1O14646 1710 aa16.6■□□□□ 0.25
MSRA-205ENST00000518255 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
MSRA-205ENST00000518255 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.24
MSRA-205ENST00000518255 MAGI1Q96QZ7 1491 aaPredicted RBP16.58■□□□□ 0.24
MSRA-205ENST00000518255 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
MSRA-205ENST00000518255 GRIN2BQ13224 1484 aa16.56■□□□□ 0.24
MSRA-205ENST00000518255 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
MSRA-205ENST00000518255 FBLN2P98095 1184 aa16.53■□□□□ 0.24
MSRA-205ENST00000518255 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
MSRA-205ENST00000518255 SYNJ2O15056 1496 aa16.49■□□□□ 0.23
MSRA-205ENST00000518255 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
MSRA-205ENST00000518255 CHMP7Q8WUX9 453 aaPredicted RBP16.49■□□□□ 0.23
MSRA-205ENST00000518255 GAPVD1Q14C86 1478 aa16.48■□□□□ 0.23
MSRA-205ENST00000518255 CLASP1Q7Z460 1538 aa16.47■□□□□ 0.23
MSRA-205ENST00000518255 WRNQ14191 1432 aaPredicted RBP eCLIP16.46■□□□□ 0.23
MSRA-205ENST00000518255 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
MSRA-205ENST00000518255 PBRM1Q86U86 1689 aa16.45■□□□□ 0.22
MSRA-205ENST00000518255 TOP2BQ02880 1626 aa16.44■□□□□ 0.22
MSRA-205ENST00000518255 BIVM-ERCC5R4GMW8 1640 aa16.44■□□□□ 0.22
MSRA-205ENST00000518255 CYB5RLQ6IPT4 315 aa16.43■□□□□ 0.22
MSRA-205ENST00000518255 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
MSRA-205ENST00000518255 GRIN2AQ12879 1464 aa16.33■□□□□ 0.2
MSRA-205ENST00000518255 ERICH3Q5RHP9 1530 aa16.33■□□□□ 0.2
MSRA-205ENST00000518255 ADAMTS12P58397 1594 aa16.32■□□□□ 0.2
MSRA-205ENST00000518255 FHAD1B1AJZ9 1412 aa16.31■□□□□ 0.2
MSRA-205ENST00000518255 NUP160Q12769 1436 aa16.29■□□□□ 0.2
MSRA-205ENST00000518255 CEP170Q5SW79 1584 aa16.22■□□□□ 0.19
MSRA-205ENST00000518255 SHROOM2Q13796 1616 aa16.21■□□□□ 0.19
MSRA-205ENST00000518255 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
MSRA-205ENST00000518255 PHF23Q9BUL5 403 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms