RNA–Protein interactions for RNA: ENST00000517641.1

HOXA-AS2-203, HOXA cluster antisense RNA 2, humanhuman

TSL 1 (best)

Gene HOXA-AS2, Length 583 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA-AS2-203ENST00000517641 NISCHQ9Y2I1 1504 aa17.95■□□□□ 0.46
HOXA-AS2-203ENST00000517641 CCDC180Q9P1Z9 1646 aa16.13■□□□□ 0.17
HOXA-AS2-203ENST00000517641 ABCC9O60706 1549 aa15.9■□□□□ 0.14
HOXA-AS2-203ENST00000517641 RB1CC1Q8TDY2 1594 aa15.21■□□□□ 0.03
HOXA-AS2-203ENST00000517641 NACADO15069 1562 aa15.14■□□□□ 0.01
HOXA-AS2-203ENST00000517641 UNC13AQ9UPW8 1703 aa15.1■□□□□ 0.01
HOXA-AS2-203ENST00000517641 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
HOXA-AS2-203ENST00000517641 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
HOXA-AS2-203ENST00000517641 ZCCHC6Q5VYS8 1495 aaKnown RBP14.94□□□□□ -0.02
HOXA-AS2-203ENST00000517641 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
HOXA-AS2-203ENST00000517641 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.04
HOXA-AS2-203ENST00000517641 DNAJC5BQ9UF47 199 aa14.8□□□□□ -0.04
HOXA-AS2-203ENST00000517641 PABPN1Q86U42 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
HOXA-AS2-203ENST00000517641 SCRIBQ14160 1630 aa14.69□□□□□ -0.06
HOXA-AS2-203ENST00000517641 SHROOM4Q9ULL8 1493 aa14.55□□□□□ -0.08
HOXA-AS2-203ENST00000517641 CC2D2AQ9P2K1 1620 aa14.44□□□□□ -0.1
HOXA-AS2-203ENST00000517641 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
HOXA-AS2-203ENST00000517641 CECR2Q9BXF3 1484 aa14.29□□□□□ -0.12
HOXA-AS2-203ENST00000517641 CHIC1Q5VXU3 224 aa14.19□□□□□ -0.14
HOXA-AS2-203ENST00000517641 SMARCA4P51532 1647 aa14.04□□□□□ -0.16
HOXA-AS2-203ENST00000517641 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
HOXA-AS2-203ENST00000517641 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
HOXA-AS2-203ENST00000517641 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
HOXA-AS2-203ENST00000517641 BAZ1AQ9NRL2 1556 aaPredicted RBP13.91□□□□□ -0.18
HOXA-AS2-203ENST00000517641 HMGXB3Q12766 1538 aa13.9□□□□□ -0.18
HOXA-AS2-203ENST00000517641 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
HOXA-AS2-203ENST00000517641 AEBP2Q6ZN18 517 aaPredicted RBP13.88□□□□□ -0.19
HOXA-AS2-203ENST00000517641 MROH2BQ7Z745 1585 aa13.86□□□□□ -0.19
HOXA-AS2-203ENST00000517641 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
HOXA-AS2-203ENST00000517641 WIZO95785 1651 aa13.76□□□□□ -0.21
HOXA-AS2-203ENST00000517641 NESP48681 1621 aa13.75□□□□□ -0.21
HOXA-AS2-203ENST00000517641 KIF21AQ7Z4S6 1674 aa13.68□□□□□ -0.22
HOXA-AS2-203ENST00000517641 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
HOXA-AS2-203ENST00000517641 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
HOXA-AS2-203ENST00000517641 THOC2Q8NI27 1593 aaKnown RBP13.64□□□□□ -0.23
HOXA-AS2-203ENST00000517641 CUX2O14529 1486 aa13.63□□□□□ -0.23
HOXA-AS2-203ENST00000517641 RSF1Q96T23 1441 aaPredicted RBP13.57□□□□□ -0.24
HOXA-AS2-203ENST00000517641 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
HOXA-AS2-203ENST00000517641 PRDM2Q13029 1718 aa13.5□□□□□ -0.25
HOXA-AS2-203ENST00000517641 CADPSQ9ULU8 1353 aa13.49□□□□□ -0.25
HOXA-AS2-203ENST00000517641 PDS5BQ9NTI5 1447 aa13.47□□□□□ -0.25
HOXA-AS2-203ENST00000517641 WDR62O43379 1518 aa13.43□□□□□ -0.26
HOXA-AS2-203ENST00000517641 CFTRP13569 1480 aa13.42□□□□□ -0.26
HOXA-AS2-203ENST00000517641 DNAJC5Q9H3Z4 198 aa13.41□□□□□ -0.26
HOXA-AS2-203ENST00000517641 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
HOXA-AS2-203ENST00000517641 FANCD2Q9BXW9 1451 aa13.38□□□□□ -0.27
HOXA-AS2-203ENST00000517641 CEP164Q9UPV0 1460 aa13.38□□□□□ -0.27
HOXA-AS2-203ENST00000517641 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
HOXA-AS2-203ENST00000517641 URB2Q14146 1524 aaKnown RBP13.31□□□□□ -0.28
HOXA-AS2-203ENST00000517641 TOPBP1Q92547 1522 aa13.17□□□□□ -0.3
HOXA-AS2-203ENST00000517641 DNMBPQ6XZF7 1577 aa13.15□□□□□ -0.3
HOXA-AS2-203ENST00000517641 ZNF608Q9ULD9 1512 aaPredicted RBP13.11□□□□□ -0.31
HOXA-AS2-203ENST00000517641 TARBP1Q13395 1621 aaKnown RBP13.1□□□□□ -0.31
HOXA-AS2-203ENST00000517641 EIF4G3O43432 1585 aaKnown RBP13.1□□□□□ -0.31
HOXA-AS2-203ENST00000517641 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
HOXA-AS2-203ENST00000517641 ABCC8Q09428 1581 aa13.07□□□□□ -0.32
HOXA-AS2-203ENST00000517641 CHD1O14646 1710 aa13.05□□□□□ -0.32
HOXA-AS2-203ENST00000517641 POLA1P09884 1462 aaPredicted RBP13.04□□□□□ -0.32
HOXA-AS2-203ENST00000517641 CUX1P39880 1505 aa13.03□□□□□ -0.32
HOXA-AS2-203ENST00000517641 WDR97A6NE52 1622 aa13.02□□□□□ -0.33
HOXA-AS2-203ENST00000517641 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
HOXA-AS2-203ENST00000517641 SUPT5HO00267 1087 aaKnown RBP12.99□□□□□ -0.33
HOXA-AS2-203ENST00000517641 AQRO60306 1485 aaKnown RBP eCLIP12.97□□□□□ -0.33
HOXA-AS2-203ENST00000517641 FGD5Q6ZNL6 1462 aa12.97□□□□□ -0.33
HOXA-AS2-203ENST00000517641 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
HOXA-AS2-203ENST00000517641 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
HOXA-AS2-203ENST00000517641 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
HOXA-AS2-203ENST00000517641 PBRM1Q86U86 1689 aa12.94□□□□□ -0.34
HOXA-AS2-203ENST00000517641 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
HOXA-AS2-203ENST00000517641 SOGA1O94964 1423 aa12.91□□□□□ -0.34
HOXA-AS2-203ENST00000517641 BIVM-ERCC5R4GMW8 1640 aa12.9□□□□□ -0.34
HOXA-AS2-203ENST00000517641 TDRD9Q8NDG6 1382 aaKnown RBP12.88□□□□□ -0.35
HOXA-AS2-203ENST00000517641 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
HOXA-AS2-203ENST00000517641 SYNJ1O43426 1573 aa12.87□□□□□ -0.35
HOXA-AS2-203ENST00000517641 SNAPC4Q5SXM2 1469 aa12.87□□□□□ -0.35
HOXA-AS2-203ENST00000517641 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
HOXA-AS2-203ENST00000517641 ARHGEF11O15085 1522 aa12.86□□□□□ -0.35
HOXA-AS2-203ENST00000517641 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
HOXA-AS2-203ENST00000517641 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.36
HOXA-AS2-203ENST00000517641 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
HOXA-AS2-203ENST00000517641 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
HOXA-AS2-203ENST00000517641 MAGI1Q96QZ7 1491 aaPredicted RBP12.81□□□□□ -0.36
HOXA-AS2-203ENST00000517641 GAPVD1Q14C86 1478 aa12.79□□□□□ -0.36
HOXA-AS2-203ENST00000517641 WRNQ14191 1432 aaPredicted RBP eCLIP12.78□□□□□ -0.36
HOXA-AS2-203ENST00000517641 SYNJ2O15056 1496 aa12.77□□□□□ -0.37
HOXA-AS2-203ENST00000517641 FBLN2P98095 1184 aa12.76□□□□□ -0.37
HOXA-AS2-203ENST00000517641 ARAP1Q96P48 1450 aa12.76□□□□□ -0.37
HOXA-AS2-203ENST00000517641 ADAMTS12P58397 1594 aa12.76□□□□□ -0.37
HOXA-AS2-203ENST00000517641 CEP170Q5SW79 1584 aa12.69□□□□□ -0.38
HOXA-AS2-203ENST00000517641 CHMP7Q8WUX9 453 aaPredicted RBP12.69□□□□□ -0.38
HOXA-AS2-203ENST00000517641 GRIN2AQ12879 1464 aa12.68□□□□□ -0.38
HOXA-AS2-203ENST00000517641 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
HOXA-AS2-203ENST00000517641 ERCC6L2Q5T890 1561 aa12.65□□□□□ -0.38
HOXA-AS2-203ENST00000517641 CYB5RLQ6IPT4 315 aa12.65□□□□□ -0.38
HOXA-AS2-203ENST00000517641 SHROOM2Q13796 1616 aa12.64□□□□□ -0.39
HOXA-AS2-203ENST00000517641 NUP160Q12769 1436 aa12.63□□□□□ -0.39
HOXA-AS2-203ENST00000517641 FHAD1B1AJZ9 1412 aa12.62□□□□□ -0.39
HOXA-AS2-203ENST00000517641 RUSC2Q8N2Y8 1516 aa12.58□□□□□ -0.4
HOXA-AS2-203ENST00000517641 PHF23Q9BUL5 403 aaPredicted RBP12.56□□□□□ -0.4
HOXA-AS2-203ENST00000517641 CUL7Q14999 1698 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms