RNA–Protein interactions for RNA: ENST00000517517.1

RRM2B-204, Transcript of ribonucleotide reductase regulatory TP53 inducible subunit M2B, humanhuman

TSL 4

Gene RRM2B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRM2B-204ENST00000517517 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
RRM2B-204ENST00000517517 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
RRM2B-204ENST00000517517 ABCC9O60706 1549 aa29.9■■■□□ 2.38
RRM2B-204ENST00000517517 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
RRM2B-204ENST00000517517 NACADO15069 1562 aa28.28■■■□□ 2.12
RRM2B-204ENST00000517517 DCAF8L2P0C7V8 631 aa28.28■■■□□ 2.12
RRM2B-204ENST00000517517 DNAJC5BQ9UF47 199 aa28.01■■■□□ 2.07
RRM2B-204ENST00000517517 MYO15BQ96JP2 1530 aa27.95■■■□□ 2.06
RRM2B-204ENST00000517517 PABPN1Q86U42 306 aaKnown RBP eCLIP27.93■■■□□ 2.06
RRM2B-204ENST00000517517 UNC13AQ9UPW8 1703 aa27.88■■■□□ 2.05
RRM2B-204ENST00000517517 ZCCHC6Q5VYS8 1495 aaKnown RBP27.87■■■□□ 2.05
RRM2B-204ENST00000517517 BICRAQ9NZM4 1560 aa27.73■■■□□ 2.03
RRM2B-204ENST00000517517 AEBP2Q6ZN18 517 aaPredicted RBP27.7■■■□□ 2.02
RRM2B-204ENST00000517517 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
RRM2B-204ENST00000517517 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
RRM2B-204ENST00000517517 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
RRM2B-204ENST00000517517 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
RRM2B-204ENST00000517517 CC2D2AQ9P2K1 1620 aa26.99■■□□□ 1.91
RRM2B-204ENST00000517517 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
RRM2B-204ENST00000517517 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
RRM2B-204ENST00000517517 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
RRM2B-204ENST00000517517 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
RRM2B-204ENST00000517517 SMARCA4P51532 1647 aa26.14■■□□□ 1.78
RRM2B-204ENST00000517517 SMARCA2P51531 1590 aa25.99■■□□□ 1.75
RRM2B-204ENST00000517517 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
RRM2B-204ENST00000517517 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
RRM2B-204ENST00000517517 MROH2BQ7Z745 1585 aa25.94■■□□□ 1.74
RRM2B-204ENST00000517517 PEG3Q9GZU2 1588 aa25.86■■□□□ 1.73
RRM2B-204ENST00000517517 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
RRM2B-204ENST00000517517 NESP48681 1621 aa25.79■■□□□ 1.72
RRM2B-204ENST00000517517 ERCC6Q03468 1493 aa25.7■■□□□ 1.7
RRM2B-204ENST00000517517 WIZO95785 1651 aa25.62■■□□□ 1.69
RRM2B-204ENST00000517517 CUX2O14529 1486 aa25.58■■□□□ 1.69
RRM2B-204ENST00000517517 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
RRM2B-204ENST00000517517 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
RRM2B-204ENST00000517517 DNAJC5Q9H3Z4 198 aa25.44■■□□□ 1.66
RRM2B-204ENST00000517517 THOC2Q8NI27 1593 aaKnown RBP25.41■■□□□ 1.66
RRM2B-204ENST00000517517 CADPSQ9ULU8 1353 aa25.39■■□□□ 1.65
RRM2B-204ENST00000517517 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.65
RRM2B-204ENST00000517517 PDS5BQ9NTI5 1447 aa25.34■■□□□ 1.65
RRM2B-204ENST00000517517 TOP2AP11388 1531 aaKnown RBP25.24■■□□□ 1.63
RRM2B-204ENST00000517517 CFTRP13569 1480 aa25.15■■□□□ 1.62
RRM2B-204ENST00000517517 MRC2Q9UBG0 1479 aa25.15■■□□□ 1.62
RRM2B-204ENST00000517517 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
RRM2B-204ENST00000517517 WDR62O43379 1518 aa25.08■■□□□ 1.61
RRM2B-204ENST00000517517 CEP164Q9UPV0 1460 aa25.06■■□□□ 1.6
RRM2B-204ENST00000517517 CCDC88BA6NC98 1476 aa25.02■■□□□ 1.6
RRM2B-204ENST00000517517 URB2Q14146 1524 aaKnown RBP24.92■■□□□ 1.58
RRM2B-204ENST00000517517 PRDM2Q13029 1718 aa24.82■■□□□ 1.56
RRM2B-204ENST00000517517 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
RRM2B-204ENST00000517517 ZNF608Q9ULD9 1512 aaPredicted RBP24.62■■□□□ 1.53
RRM2B-204ENST00000517517 IFT140Q96RY7 1462 aa24.56■■□□□ 1.52
RRM2B-204ENST00000517517 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
RRM2B-204ENST00000517517 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
RRM2B-204ENST00000517517 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
RRM2B-204ENST00000517517 OSCARQ8IYS5 282 aa24.48■■□□□ 1.51
RRM2B-204ENST00000517517 TARBP1Q13395 1621 aaKnown RBP24.44■■□□□ 1.5
RRM2B-204ENST00000517517 POLA1P09884 1462 aaPredicted RBP24.43■■□□□ 1.5
RRM2B-204ENST00000517517 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
RRM2B-204ENST00000517517 AQRO60306 1485 aaKnown RBP eCLIP24.4■■□□□ 1.5
RRM2B-204ENST00000517517 EIF4G3O43432 1585 aaKnown RBP24.4■■□□□ 1.5
RRM2B-204ENST00000517517 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
RRM2B-204ENST00000517517 CUX1P39880 1505 aa24.35■■□□□ 1.49
RRM2B-204ENST00000517517 SOGA1O94964 1423 aa24.3■■□□□ 1.48
RRM2B-204ENST00000517517 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
RRM2B-204ENST00000517517 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
RRM2B-204ENST00000517517 CHD1O14646 1710 aa24.19■■□□□ 1.46
RRM2B-204ENST00000517517 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
RRM2B-204ENST00000517517 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
RRM2B-204ENST00000517517 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
RRM2B-204ENST00000517517 FBLN2P98095 1184 aa24.14■■□□□ 1.45
RRM2B-204ENST00000517517 ARHGEF11O15085 1522 aa24.12■■□□□ 1.45
RRM2B-204ENST00000517517 SNAPC4Q5SXM2 1469 aa24.11■■□□□ 1.45
RRM2B-204ENST00000517517 WDR97A6NE52 1622 aa24.1■■□□□ 1.45
RRM2B-204ENST00000517517 GRIN2BQ13224 1484 aa24.03■■□□□ 1.44
RRM2B-204ENST00000517517 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
RRM2B-204ENST00000517517 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
RRM2B-204ENST00000517517 MAGI1Q96QZ7 1491 aaPredicted RBP23.99■■□□□ 1.43
RRM2B-204ENST00000517517 SYNJ1O43426 1573 aa23.98■■□□□ 1.43
RRM2B-204ENST00000517517 CYB5RLQ6IPT4 315 aa23.96■■□□□ 1.43
RRM2B-204ENST00000517517 CHMP7Q8WUX9 453 aaPredicted RBP23.96■■□□□ 1.43
RRM2B-204ENST00000517517 PBRM1Q86U86 1689 aa23.95■■□□□ 1.43
RRM2B-204ENST00000517517 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.43
RRM2B-204ENST00000517517 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
RRM2B-204ENST00000517517 TOP2BQ02880 1626 aa23.94■■□□□ 1.42
RRM2B-204ENST00000517517 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
RRM2B-204ENST00000517517 SYNJ2O15056 1496 aa23.94■■□□□ 1.42
RRM2B-204ENST00000517517 ARAP1Q96P48 1450 aa23.94■■□□□ 1.42
RRM2B-204ENST00000517517 BIVM-ERCC5R4GMW8 1640 aa23.93■■□□□ 1.42
RRM2B-204ENST00000517517 PHF23Q9BUL5 403 aaPredicted RBP23.77■■□□□ 1.4
RRM2B-204ENST00000517517 ADAMTS12P58397 1594 aa23.76■■□□□ 1.39
RRM2B-204ENST00000517517 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
RRM2B-204ENST00000517517 CEP170Q5SW79 1584 aa23.69■■□□□ 1.38
RRM2B-204ENST00000517517 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
RRM2B-204ENST00000517517 NUP160Q12769 1436 aa23.67■■□□□ 1.38
RRM2B-204ENST00000517517 ERCC6L2Q5T890 1561 aa23.67■■□□□ 1.38
RRM2B-204ENST00000517517 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
RRM2B-204ENST00000517517 TRHP20396 242 aaPredicted RBP23.56■■□□□ 1.36
RRM2B-204ENST00000517517 SENP3Q9H4L4 574 aaPredicted RBP23.55■■□□□ 1.36
RRM2B-204ENST00000517517 SHROOM2Q13796 1616 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms