RNA–Protein interactions for RNA: ENST00000516460.1

RNU4ATAC12P-201, Transcript of RNA, U4atac small nuclear 12, pseudogene, humanhuman

BASIC

Gene RNU4ATAC12P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC12P-201ENST00000516460 NISCHQ9Y2I1 1504 aa20.88■□□□□ 0.93
RNU4ATAC12P-201ENST00000516460 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
RNU4ATAC12P-201ENST00000516460 ZCCHC6Q5VYS8 1495 aaKnown RBP17.58■□□□□ 0.41
RNU4ATAC12P-201ENST00000516460 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
RNU4ATAC12P-201ENST00000516460 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
RNU4ATAC12P-201ENST00000516460 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
RNU4ATAC12P-201ENST00000516460 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
RNU4ATAC12P-201ENST00000516460 ABCC9O60706 1549 aa16.9■□□□□ 0.3
RNU4ATAC12P-201ENST00000516460 NACADO15069 1562 aa16.88■□□□□ 0.29
RNU4ATAC12P-201ENST00000516460 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
RNU4ATAC12P-201ENST00000516460 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
RNU4ATAC12P-201ENST00000516460 SUPT5HO00267 1087 aaKnown RBP16.51■□□□□ 0.23
RNU4ATAC12P-201ENST00000516460 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.21
RNU4ATAC12P-201ENST00000516460 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
RNU4ATAC12P-201ENST00000516460 CECR2Q9BXF3 1484 aa16.15■□□□□ 0.18
RNU4ATAC12P-201ENST00000516460 BAZ1AQ9NRL2 1556 aaPredicted RBP16.13■□□□□ 0.17
RNU4ATAC12P-201ENST00000516460 BICRAQ9NZM4 1560 aa16.12■□□□□ 0.17
RNU4ATAC12P-201ENST00000516460 MROH2BQ7Z745 1585 aa16.1■□□□□ 0.17
RNU4ATAC12P-201ENST00000516460 SMARCA4P51532 1647 aa16.02■□□□□ 0.16
RNU4ATAC12P-201ENST00000516460 WIZO95785 1651 aa15.99■□□□□ 0.15
RNU4ATAC12P-201ENST00000516460 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
RNU4ATAC12P-201ENST00000516460 PABPN1Q86U42 306 aaKnown RBP eCLIP15.92■□□□□ 0.14
RNU4ATAC12P-201ENST00000516460 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
RNU4ATAC12P-201ENST00000516460 PEG3Q9GZU2 1588 aa15.84■□□□□ 0.13
RNU4ATAC12P-201ENST00000516460 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
RNU4ATAC12P-201ENST00000516460 ATAD2BQ9ULI0 1458 aa15.68■□□□□ 0.1
RNU4ATAC12P-201ENST00000516460 EIF4G1Q04637 1599 aaKnown RBP15.67■□□□□ 0.1
RNU4ATAC12P-201ENST00000516460 CCDC88BA6NC98 1476 aa15.66■□□□□ 0.1
RNU4ATAC12P-201ENST00000516460 BAZ1BQ9UIG0 1483 aaKnown RBP15.62■□□□□ 0.09
RNU4ATAC12P-201ENST00000516460 HMGXB3Q12766 1538 aa15.57■□□□□ 0.08
RNU4ATAC12P-201ENST00000516460 TRIM41Q8WV44 630 aa15.56■□□□□ 0.08
RNU4ATAC12P-201ENST00000516460 NCAPD3P42695 1498 aa15.53■□□□□ 0.08
RNU4ATAC12P-201ENST00000516460 ABCC8Q09428 1581 aa15.38■□□□□ 0.05
RNU4ATAC12P-201ENST00000516460 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
RNU4ATAC12P-201ENST00000516460 WRNQ14191 1432 aaPredicted RBP eCLIP15.3■□□□□ 0.04
RNU4ATAC12P-201ENST00000516460 PRDM2Q13029 1718 aa15.27■□□□□ 0.04
RNU4ATAC12P-201ENST00000516460 LOC105371045A0A1W2PR82 267 aa15.27■□□□□ 0.04
RNU4ATAC12P-201ENST00000516460 EEA1Q15075 1411 aa15.26■□□□□ 0.03
RNU4ATAC12P-201ENST00000516460 CFTRP13569 1480 aa15.23■□□□□ 0.03
RNU4ATAC12P-201ENST00000516460 SYNJ1O43426 1573 aa15.22■□□□□ 0.03
RNU4ATAC12P-201ENST00000516460 FAM9AQ8IZU1 332 aaPredicted RBP15.21■□□□□ 0.03
RNU4ATAC12P-201ENST00000516460 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
RNU4ATAC12P-201ENST00000516460 BIVM-ERCC5R4GMW8 1640 aa15.18■□□□□ 0.02
RNU4ATAC12P-201ENST00000516460 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
RNU4ATAC12P-201ENST00000516460 SOGA1O94964 1423 aa15.11■□□□□ 0.01
RNU4ATAC12P-201ENST00000516460 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
RNU4ATAC12P-201ENST00000516460 CUX1P39880 1505 aa15.06■□□□□ 0
RNU4ATAC12P-201ENST00000516460 RUSC2Q8N2Y8 1516 aa15.03■□□□□ -0
RNU4ATAC12P-201ENST00000516460 KIF21BO75037 1637 aa15.03■□□□□ -0
RNU4ATAC12P-201ENST00000516460 GOLGA3Q08378 1498 aa15.01□□□□□ -0.01
RNU4ATAC12P-201ENST00000516460 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
RNU4ATAC12P-201ENST00000516460 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
RNU4ATAC12P-201ENST00000516460 TNIKQ9UKE5 1360 aa14.98□□□□□ -0.01
RNU4ATAC12P-201ENST00000516460 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
RNU4ATAC12P-201ENST00000516460 EHMT2Q96KQ7 1210 aa14.93□□□□□ -0.02
RNU4ATAC12P-201ENST00000516460 KIF27Q86VH2 1401 aa14.92□□□□□ -0.02
RNU4ATAC12P-201ENST00000516460 DNMBPQ6XZF7 1577 aa14.91□□□□□ -0.02
RNU4ATAC12P-201ENST00000516460 CEP162Q5TB80 1403 aa14.9□□□□□ -0.02
RNU4ATAC12P-201ENST00000516460 ERICH3Q5RHP9 1530 aa14.89□□□□□ -0.03
RNU4ATAC12P-201ENST00000516460 NESP48681 1621 aa14.88□□□□□ -0.03
RNU4ATAC12P-201ENST00000516460 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
RNU4ATAC12P-201ENST00000516460 FGD5Q6ZNL6 1462 aa14.87□□□□□ -0.03
RNU4ATAC12P-201ENST00000516460 PDS5BQ9NTI5 1447 aa14.86□□□□□ -0.03
RNU4ATAC12P-201ENST00000516460 PRXQ9BXM0 1461 aa14.84□□□□□ -0.03
RNU4ATAC12P-201ENST00000516460 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
RNU4ATAC12P-201ENST00000516460 TRIM26Q12899 539 aaPredicted RBP14.83□□□□□ -0.04
RNU4ATAC12P-201ENST00000516460 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
RNU4ATAC12P-201ENST00000516460 PCGF6Q9BYE7 350 aa14.81□□□□□ -0.04
RNU4ATAC12P-201ENST00000516460 CUX2O14529 1486 aa14.81□□□□□ -0.04
RNU4ATAC12P-201ENST00000516460 KIF21AQ7Z4S6 1674 aa14.77□□□□□ -0.04
RNU4ATAC12P-201ENST00000516460 ABCA10Q8WWZ4 1543 aa14.77□□□□□ -0.04
RNU4ATAC12P-201ENST00000516460 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
RNU4ATAC12P-201ENST00000516460 URB2Q14146 1524 aaKnown RBP14.76□□□□□ -0.05
RNU4ATAC12P-201ENST00000516460 CLIP1P30622 1438 aa14.75□□□□□ -0.05
RNU4ATAC12P-201ENST00000516460 DNAJC5BQ9UF47 199 aa14.74□□□□□ -0.05
RNU4ATAC12P-201ENST00000516460 WDR97A6NE52 1622 aa14.73□□□□□ -0.05
RNU4ATAC12P-201ENST00000516460 IGF1RP08069 1367 aa14.72□□□□□ -0.05
RNU4ATAC12P-201ENST00000516460 RAD54L2Q9Y4B4 1467 aa14.68□□□□□ -0.06
RNU4ATAC12P-201ENST00000516460 CUL7Q14999 1698 aa14.68□□□□□ -0.06
RNU4ATAC12P-201ENST00000516460 CARMIL1Q5VZK9 1371 aa14.67□□□□□ -0.06
RNU4ATAC12P-201ENST00000516460 VPS8Q8N3P4 1428 aa14.66□□□□□ -0.06
RNU4ATAC12P-201ENST00000516460 MRC2Q9UBG0 1479 aa14.66□□□□□ -0.06
RNU4ATAC12P-201ENST00000516460 ABCA5Q8WWZ7 1642 aa14.64□□□□□ -0.07
RNU4ATAC12P-201ENST00000516460 TARBP1Q13395 1621 aaKnown RBP14.6□□□□□ -0.07
RNU4ATAC12P-201ENST00000516460 HRCP23327 699 aa14.6□□□□□ -0.07
RNU4ATAC12P-201ENST00000516460 WDR62O43379 1518 aa14.58□□□□□ -0.08
RNU4ATAC12P-201ENST00000516460 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
RNU4ATAC12P-201ENST00000516460 ARAP1Q96P48 1450 aa14.57□□□□□ -0.08
RNU4ATAC12P-201ENST00000516460 CTTNBP2Q8WZ74 1663 aa14.54□□□□□ -0.08
RNU4ATAC12P-201ENST00000516460 PBRM1Q86U86 1689 aa14.52□□□□□ -0.08
RNU4ATAC12P-201ENST00000516460 IFT140Q96RY7 1462 aa14.52□□□□□ -0.08
RNU4ATAC12P-201ENST00000516460 ARHGAP35Q9NRY4 1499 aa14.52□□□□□ -0.08
RNU4ATAC12P-201ENST00000516460 APLP2Q06481 763 aa14.52□□□□□ -0.09
RNU4ATAC12P-201ENST00000516460 ERCC6Q03468 1493 aa14.51□□□□□ -0.09
RNU4ATAC12P-201ENST00000516460 TDRD9Q8NDG6 1382 aaKnown RBP14.51□□□□□ -0.09
RNU4ATAC12P-201ENST00000516460 PPARGC1BQ86YN6 1023 aaKnown RBP14.51□□□□□ -0.09
RNU4ATAC12P-201ENST00000516460 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
RNU4ATAC12P-201ENST00000516460 EFCAB5A4FU69 1503 aa14.49□□□□□ -0.09
RNU4ATAC12P-201ENST00000516460 RANGAP1P46060 587 aaPredicted RBP14.48□□□□□ -0.09
RNU4ATAC12P-201ENST00000516460 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms