RNA–Protein interactions for RNA: ENST00000515143.5

SPOCK3-223, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 4

Gene SPOCK3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-223ENST00000515143 NISCHQ9Y2I1 1504 aa18.08■□□□□ 0.49
SPOCK3-223ENST00000515143 CCDC180Q9P1Z9 1646 aa16.12■□□□□ 0.17
SPOCK3-223ENST00000515143 ABCC9O60706 1549 aa15.93■□□□□ 0.14
SPOCK3-223ENST00000515143 AEBP2Q6ZN18 517 aaPredicted RBP15.84■□□□□ 0.13
SPOCK3-223ENST00000515143 CHIC1Q5VXU3 224 aa15.42■□□□□ 0.06
SPOCK3-223ENST00000515143 RB1CC1Q8TDY2 1594 aa15.28■□□□□ 0.04
SPOCK3-223ENST00000515143 NACADO15069 1562 aa15.28■□□□□ 0.04
SPOCK3-223ENST00000515143 MYO15BQ96JP2 1530 aa15.23■□□□□ 0.03
SPOCK3-223ENST00000515143 DCAF8L2P0C7V8 631 aa15.05■□□□□ -0
SPOCK3-223ENST00000515143 DCAF1Q9Y4B6 1507 aa15.04■□□□□ -0
SPOCK3-223ENST00000515143 ZCCHC6Q5VYS8 1495 aaKnown RBP15□□□□□ -0.01
SPOCK3-223ENST00000515143 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
SPOCK3-223ENST00000515143 BICRAQ9NZM4 1560 aa14.87□□□□□ -0.03
SPOCK3-223ENST00000515143 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
SPOCK3-223ENST00000515143 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
SPOCK3-223ENST00000515143 SHROOM4Q9ULL8 1493 aa14.78□□□□□ -0.04
SPOCK3-223ENST00000515143 SCRIBQ14160 1630 aa14.57□□□□□ -0.08
SPOCK3-223ENST00000515143 EIF4G1Q04637 1599 aaKnown RBP14.45□□□□□ -0.1
SPOCK3-223ENST00000515143 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
SPOCK3-223ENST00000515143 CECR2Q9BXF3 1484 aa14.38□□□□□ -0.11
SPOCK3-223ENST00000515143 NCAPD3P42695 1498 aa14.16□□□□□ -0.14
SPOCK3-223ENST00000515143 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
SPOCK3-223ENST00000515143 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
SPOCK3-223ENST00000515143 SMARCA4P51532 1647 aa14.01□□□□□ -0.17
SPOCK3-223ENST00000515143 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
SPOCK3-223ENST00000515143 PEG3Q9GZU2 1588 aa13.99□□□□□ -0.17
SPOCK3-223ENST00000515143 HMGXB3Q12766 1538 aa13.99□□□□□ -0.17
SPOCK3-223ENST00000515143 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
SPOCK3-223ENST00000515143 BAZ1BQ9UIG0 1483 aaKnown RBP13.87□□□□□ -0.19
SPOCK3-223ENST00000515143 CUX2O14529 1486 aa13.79□□□□□ -0.2
SPOCK3-223ENST00000515143 NESP48681 1621 aa13.73□□□□□ -0.21
SPOCK3-223ENST00000515143 LAMC3Q9Y6N6 1575 aa13.73□□□□□ -0.21
SPOCK3-223ENST00000515143 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
SPOCK3-223ENST00000515143 DNAJC5Q9H3Z4 198 aa13.71□□□□□ -0.21
SPOCK3-223ENST00000515143 RSF1Q96T23 1441 aaPredicted RBP13.71□□□□□ -0.22
SPOCK3-223ENST00000515143 CADPSQ9ULU8 1353 aa13.7□□□□□ -0.22
SPOCK3-223ENST00000515143 PDS5BQ9NTI5 1447 aa13.67□□□□□ -0.22
SPOCK3-223ENST00000515143 WIZO95785 1651 aa13.66□□□□□ -0.22
SPOCK3-223ENST00000515143 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
SPOCK3-223ENST00000515143 THOC2Q8NI27 1593 aaKnown RBP13.58□□□□□ -0.24
SPOCK3-223ENST00000515143 CFTRP13569 1480 aa13.57□□□□□ -0.24
SPOCK3-223ENST00000515143 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
SPOCK3-223ENST00000515143 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
SPOCK3-223ENST00000515143 MRC2Q9UBG0 1479 aa13.49□□□□□ -0.25
SPOCK3-223ENST00000515143 WDR62O43379 1518 aa13.47□□□□□ -0.25
SPOCK3-223ENST00000515143 FANCD2Q9BXW9 1451 aa13.47□□□□□ -0.25
SPOCK3-223ENST00000515143 CEP164Q9UPV0 1460 aa13.44□□□□□ -0.26
SPOCK3-223ENST00000515143 CCDC88BA6NC98 1476 aa13.43□□□□□ -0.26
SPOCK3-223ENST00000515143 URB2Q14146 1524 aaKnown RBP13.35□□□□□ -0.27
SPOCK3-223ENST00000515143 SENP3Q9H4L4 574 aaPredicted RBP13.33□□□□□ -0.28
SPOCK3-223ENST00000515143 ABCC8Q09428 1581 aa13.29□□□□□ -0.28
SPOCK3-223ENST00000515143 PRDM2Q13029 1718 aa13.28□□□□□ -0.28
SPOCK3-223ENST00000515143 TOPBP1Q92547 1522 aa13.23□□□□□ -0.29
SPOCK3-223ENST00000515143 IFT140Q96RY7 1462 aa13.23□□□□□ -0.29
SPOCK3-223ENST00000515143 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
SPOCK3-223ENST00000515143 DNMBPQ6XZF7 1577 aa13.17□□□□□ -0.3
SPOCK3-223ENST00000515143 ZNF608Q9ULD9 1512 aaPredicted RBP13.14□□□□□ -0.31
SPOCK3-223ENST00000515143 TARBP1Q13395 1621 aaKnown RBP13.11□□□□□ -0.31
SPOCK3-223ENST00000515143 POLA1P09884 1462 aaPredicted RBP13.1□□□□□ -0.31
SPOCK3-223ENST00000515143 SOGA1O94964 1423 aa13.07□□□□□ -0.32
SPOCK3-223ENST00000515143 AQRO60306 1485 aaKnown RBP eCLIP13.05□□□□□ -0.32
SPOCK3-223ENST00000515143 WDR97A6NE52 1622 aa13.04□□□□□ -0.32
SPOCK3-223ENST00000515143 SUPT5HO00267 1087 aaKnown RBP13.04□□□□□ -0.32
SPOCK3-223ENST00000515143 CUX1P39880 1505 aa13.03□□□□□ -0.32
SPOCK3-223ENST00000515143 EIF4G3O43432 1585 aaKnown RBP13.02□□□□□ -0.33
SPOCK3-223ENST00000515143 RAD54L2Q9Y4B4 1467 aa13.01□□□□□ -0.33
SPOCK3-223ENST00000515143 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
SPOCK3-223ENST00000515143 TDRD9Q8NDG6 1382 aaKnown RBP12.99□□□□□ -0.33
SPOCK3-223ENST00000515143 ABCA10Q8WWZ4 1543 aa12.94□□□□□ -0.34
SPOCK3-223ENST00000515143 GRIN2BQ13224 1484 aa12.94□□□□□ -0.34
SPOCK3-223ENST00000515143 MAGI1Q96QZ7 1491 aaPredicted RBP12.94□□□□□ -0.34
SPOCK3-223ENST00000515143 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
SPOCK3-223ENST00000515143 WRNQ14191 1432 aaPredicted RBP eCLIP12.9□□□□□ -0.34
SPOCK3-223ENST00000515143 ARHGEF11O15085 1522 aa12.9□□□□□ -0.34
SPOCK3-223ENST00000515143 GAPVD1Q14C86 1478 aa12.9□□□□□ -0.34
SPOCK3-223ENST00000515143 RIMBP3CA6NJZ7 1639 aa12.89□□□□□ -0.35
SPOCK3-223ENST00000515143 RIMBP3BA6NNM3 1639 aa12.89□□□□□ -0.35
SPOCK3-223ENST00000515143 RIMBP3Q9UFD9 1639 aa12.89□□□□□ -0.35
SPOCK3-223ENST00000515143 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
SPOCK3-223ENST00000515143 SYNJ2O15056 1496 aa12.88□□□□□ -0.35
SPOCK3-223ENST00000515143 SNAPC4Q5SXM2 1469 aa12.88□□□□□ -0.35
SPOCK3-223ENST00000515143 TOP2BQ02880 1626 aa12.87□□□□□ -0.35
SPOCK3-223ENST00000515143 CHD1O14646 1710 aa12.86□□□□□ -0.35
SPOCK3-223ENST00000515143 FBLN2P98095 1184 aa12.86□□□□□ -0.35
SPOCK3-223ENST00000515143 BIVM-ERCC5R4GMW8 1640 aa12.85□□□□□ -0.35
SPOCK3-223ENST00000515143 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
SPOCK3-223ENST00000515143 CLASP1Q7Z460 1538 aa12.84□□□□□ -0.35
SPOCK3-223ENST00000515143 CYB5RLQ6IPT4 315 aa12.81□□□□□ -0.36
SPOCK3-223ENST00000515143 SYNJ1O43426 1573 aa12.8□□□□□ -0.36
SPOCK3-223ENST00000515143 ARAP1Q96P48 1450 aa12.79□□□□□ -0.36
SPOCK3-223ENST00000515143 ERICH3Q5RHP9 1530 aa12.78□□□□□ -0.36
SPOCK3-223ENST00000515143 FHAD1B1AJZ9 1412 aa12.77□□□□□ -0.37
SPOCK3-223ENST00000515143 NUP160Q12769 1436 aa12.76□□□□□ -0.37
SPOCK3-223ENST00000515143 PBRM1Q86U86 1689 aa12.76□□□□□ -0.37
SPOCK3-223ENST00000515143 GRIN2AQ12879 1464 aa12.75□□□□□ -0.37
SPOCK3-223ENST00000515143 ADAMTS12P58397 1594 aa12.7□□□□□ -0.38
SPOCK3-223ENST00000515143 IGF1RP08069 1367 aa12.69□□□□□ -0.38
SPOCK3-223ENST00000515143 CEP170Q5SW79 1584 aa12.65□□□□□ -0.38
SPOCK3-223ENST00000515143 JPH4Q96JJ6 628 aa12.65□□□□□ -0.38
SPOCK3-223ENST00000515143 SHROOM2Q13796 1616 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms