RNA–Protein interactions for RNA: ENST00000515106.1

ALPK1-217, Transcript of alpha kinase 1, humanhuman

TSL 4

Gene ALPK1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1-217ENST00000515106 NISCHQ9Y2I1 1504 aa26.76■■□□□ 1.87
ALPK1-217ENST00000515106 ABCC9O60706 1549 aa24.35■■□□□ 1.49
ALPK1-217ENST00000515106 CCDC180Q9P1Z9 1646 aa24.07■■□□□ 1.44
ALPK1-217ENST00000515106 DNAJC5BQ9UF47 199 aa23.08■■□□□ 1.29
ALPK1-217ENST00000515106 RB1CC1Q8TDY2 1594 aa23.06■■□□□ 1.28
ALPK1-217ENST00000515106 NACADO15069 1562 aa22.85■■□□□ 1.25
ALPK1-217ENST00000515106 DCAF8L2P0C7V8 631 aa22.75■■□□□ 1.23
ALPK1-217ENST00000515106 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
ALPK1-217ENST00000515106 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
ALPK1-217ENST00000515106 MYO15BQ96JP2 1530 aa22.46■■□□□ 1.19
ALPK1-217ENST00000515106 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
ALPK1-217ENST00000515106 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
ALPK1-217ENST00000515106 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
ALPK1-217ENST00000515106 DCAF1Q9Y4B6 1507 aa22.09■■□□□ 1.13
ALPK1-217ENST00000515106 SHROOM4Q9ULL8 1493 aa22.08■■□□□ 1.12
ALPK1-217ENST00000515106 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
ALPK1-217ENST00000515106 CC2D2AQ9P2K1 1620 aa21.96■■□□□ 1.11
ALPK1-217ENST00000515106 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
ALPK1-217ENST00000515106 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
ALPK1-217ENST00000515106 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
ALPK1-217ENST00000515106 DNAJC5Q9H3Z4 198 aa21.37■■□□□ 1.01
ALPK1-217ENST00000515106 NCAPD3P42695 1498 aa21.12■□□□□ 0.97
ALPK1-217ENST00000515106 CUX2O14529 1486 aa21.08■□□□□ 0.97
ALPK1-217ENST00000515106 ERCC6Q03468 1493 aa21.05■□□□□ 0.96
ALPK1-217ENST00000515106 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
ALPK1-217ENST00000515106 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
ALPK1-217ENST00000515106 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
ALPK1-217ENST00000515106 SMARCA4P51532 1647 aa20.9■□□□□ 0.94
ALPK1-217ENST00000515106 NESP48681 1621 aa20.85■□□□□ 0.93
ALPK1-217ENST00000515106 BAZ1BQ9UIG0 1483 aaKnown RBP20.8■□□□□ 0.92
ALPK1-217ENST00000515106 BAZ1AQ9NRL2 1556 aaPredicted RBP20.78■□□□□ 0.92
ALPK1-217ENST00000515106 PEG3Q9GZU2 1588 aa20.71■□□□□ 0.91
ALPK1-217ENST00000515106 LAMC3Q9Y6N6 1575 aa20.65■□□□□ 0.9
ALPK1-217ENST00000515106 THOC2Q8NI27 1593 aaKnown RBP20.64■□□□□ 0.9
ALPK1-217ENST00000515106 MROH2BQ7Z745 1585 aa20.62■□□□□ 0.89
ALPK1-217ENST00000515106 PDS5BQ9NTI5 1447 aa20.58■□□□□ 0.88
ALPK1-217ENST00000515106 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
ALPK1-217ENST00000515106 CADPSQ9ULU8 1353 aa20.47■□□□□ 0.87
ALPK1-217ENST00000515106 MRC2Q9UBG0 1479 aa20.39■□□□□ 0.85
ALPK1-217ENST00000515106 TRIM41Q8WV44 630 aa20.34■□□□□ 0.85
ALPK1-217ENST00000515106 WIZO95785 1651 aa20.34■□□□□ 0.85
ALPK1-217ENST00000515106 WDR62O43379 1518 aa20.33■□□□□ 0.85
ALPK1-217ENST00000515106 CEP164Q9UPV0 1460 aa20.27■□□□□ 0.84
ALPK1-217ENST00000515106 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
ALPK1-217ENST00000515106 CFTRP13569 1480 aa20.18■□□□□ 0.82
ALPK1-217ENST00000515106 OSCARQ8IYS5 282 aa20.13■□□□□ 0.81
ALPK1-217ENST00000515106 RSF1Q96T23 1441 aaPredicted RBP20.12■□□□□ 0.81
ALPK1-217ENST00000515106 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.81
ALPK1-217ENST00000515106 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
ALPK1-217ENST00000515106 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
ALPK1-217ENST00000515106 IFT140Q96RY7 1462 aa19.88■□□□□ 0.77
ALPK1-217ENST00000515106 CCDC88BA6NC98 1476 aa19.87■□□□□ 0.77
ALPK1-217ENST00000515106 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
ALPK1-217ENST00000515106 RIMBP3CA6NJZ7 1639 aa19.83■□□□□ 0.76
ALPK1-217ENST00000515106 RIMBP3BA6NNM3 1639 aa19.83■□□□□ 0.76
ALPK1-217ENST00000515106 RIMBP3Q9UFD9 1639 aa19.83■□□□□ 0.76
ALPK1-217ENST00000515106 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
ALPK1-217ENST00000515106 ABCC8Q09428 1581 aa19.77■□□□□ 0.76
ALPK1-217ENST00000515106 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
ALPK1-217ENST00000515106 EIF4G3O43432 1585 aaKnown RBP19.71■□□□□ 0.75
ALPK1-217ENST00000515106 DNMBPQ6XZF7 1577 aa19.7■□□□□ 0.74
ALPK1-217ENST00000515106 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
ALPK1-217ENST00000515106 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.74
ALPK1-217ENST00000515106 TARBP1Q13395 1621 aaKnown RBP19.63■□□□□ 0.73
ALPK1-217ENST00000515106 FBLN2P98095 1184 aa19.62■□□□□ 0.73
ALPK1-217ENST00000515106 CHD1O14646 1710 aa19.6■□□□□ 0.73
ALPK1-217ENST00000515106 POLA1P09884 1462 aaPredicted RBP19.6■□□□□ 0.73
ALPK1-217ENST00000515106 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
ALPK1-217ENST00000515106 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
ALPK1-217ENST00000515106 SOGA1O94964 1423 aa19.53■□□□□ 0.72
ALPK1-217ENST00000515106 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
ALPK1-217ENST00000515106 TDRD9Q8NDG6 1382 aaKnown RBP19.52■□□□□ 0.72
ALPK1-217ENST00000515106 SNAPC4Q5SXM2 1469 aa19.45■□□□□ 0.7
ALPK1-217ENST00000515106 FGD5Q6ZNL6 1462 aa19.44■□□□□ 0.7
ALPK1-217ENST00000515106 CHMP7Q8WUX9 453 aaPredicted RBP19.44■□□□□ 0.7
ALPK1-217ENST00000515106 WDR97A6NE52 1622 aa19.42■□□□□ 0.7
ALPK1-217ENST00000515106 MAGI1Q96QZ7 1491 aaPredicted RBP19.39■□□□□ 0.69
ALPK1-217ENST00000515106 CLASP1Q7Z460 1538 aa19.39■□□□□ 0.69
ALPK1-217ENST00000515106 CUX1P39880 1505 aa19.38■□□□□ 0.69
ALPK1-217ENST00000515106 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
ALPK1-217ENST00000515106 GRIN2BQ13224 1484 aa19.37■□□□□ 0.69
ALPK1-217ENST00000515106 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
ALPK1-217ENST00000515106 GAPVD1Q14C86 1478 aa19.27■□□□□ 0.67
ALPK1-217ENST00000515106 PBRM1Q86U86 1689 aa19.22■□□□□ 0.67
ALPK1-217ENST00000515106 ABCA10Q8WWZ4 1543 aa19.21■□□□□ 0.67
ALPK1-217ENST00000515106 ABCA5Q8WWZ7 1642 aa19.17■□□□□ 0.66
ALPK1-217ENST00000515106 GRIN2AQ12879 1464 aa19.11■□□□□ 0.65
ALPK1-217ENST00000515106 WRNQ14191 1432 aaPredicted RBP eCLIP19.11■□□□□ 0.65
ALPK1-217ENST00000515106 SUPT5HO00267 1087 aaKnown RBP19.1■□□□□ 0.65
ALPK1-217ENST00000515106 ERCC6L2Q5T890 1561 aa19.07■□□□□ 0.64
ALPK1-217ENST00000515106 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
ALPK1-217ENST00000515106 NUP160Q12769 1436 aa19.06■□□□□ 0.64
ALPK1-217ENST00000515106 ADAMTS12P58397 1594 aa19.05■□□□□ 0.64
ALPK1-217ENST00000515106 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
ALPK1-217ENST00000515106 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
ALPK1-217ENST00000515106 TOP2BQ02880 1626 aa19■□□□□ 0.63
ALPK1-217ENST00000515106 BIVM-ERCC5R4GMW8 1640 aa18.99■□□□□ 0.63
ALPK1-217ENST00000515106 SHROOM2Q13796 1616 aa18.97■□□□□ 0.63
ALPK1-217ENST00000515106 ERICH3Q5RHP9 1530 aa18.96■□□□□ 0.63
ALPK1-217ENST00000515106 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms