RNA–Protein interactions for RNA: ENST00000514897.5

TSC22D3-217, Transcript of TSC22 domain family member 3, humanhuman

TSL 4

Gene TSC22D3, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-217ENST00000514897 NISCHQ9Y2I1 1504 aa28.27■■■□□ 2.12
TSC22D3-217ENST00000514897 ABCC9O60706 1549 aa25.7■■□□□ 1.7
TSC22D3-217ENST00000514897 CCDC180Q9P1Z9 1646 aa25.41■■□□□ 1.66
TSC22D3-217ENST00000514897 AEBP2Q6ZN18 517 aaPredicted RBP24.62■■□□□ 1.53
TSC22D3-217ENST00000514897 RB1CC1Q8TDY2 1594 aa24.32■■□□□ 1.48
TSC22D3-217ENST00000514897 DNAJC5BQ9UF47 199 aa24.27■■□□□ 1.48
TSC22D3-217ENST00000514897 DCAF8L2P0C7V8 631 aa24.13■■□□□ 1.45
TSC22D3-217ENST00000514897 NACADO15069 1562 aa24.08■■□□□ 1.45
TSC22D3-217ENST00000514897 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
TSC22D3-217ENST00000514897 UNC13AQ9UPW8 1703 aa23.76■■□□□ 1.39
TSC22D3-217ENST00000514897 MYO15BQ96JP2 1530 aa23.63■■□□□ 1.37
TSC22D3-217ENST00000514897 BICRAQ9NZM4 1560 aa23.59■■□□□ 1.37
TSC22D3-217ENST00000514897 ZCCHC6Q5VYS8 1495 aaKnown RBP23.51■■□□□ 1.35
TSC22D3-217ENST00000514897 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
TSC22D3-217ENST00000514897 DCAF1Q9Y4B6 1507 aa23.31■■□□□ 1.32
TSC22D3-217ENST00000514897 SCRIBQ14160 1630 aa23.22■■□□□ 1.31
TSC22D3-217ENST00000514897 SHROOM4Q9ULL8 1493 aa23.19■■□□□ 1.3
TSC22D3-217ENST00000514897 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
TSC22D3-217ENST00000514897 CECR2Q9BXF3 1484 aa23.14■■□□□ 1.29
TSC22D3-217ENST00000514897 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
TSC22D3-217ENST00000514897 DNAJC5Q9H3Z4 198 aa22.41■■□□□ 1.18
TSC22D3-217ENST00000514897 NCAPD3P42695 1498 aa22.24■■□□□ 1.15
TSC22D3-217ENST00000514897 ERCC6Q03468 1493 aa22.22■■□□□ 1.15
TSC22D3-217ENST00000514897 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
TSC22D3-217ENST00000514897 CUX2O14529 1486 aa22.15■■□□□ 1.14
TSC22D3-217ENST00000514897 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
TSC22D3-217ENST00000514897 SMARCA2P51531 1590 aa22.08■■□□□ 1.13
TSC22D3-217ENST00000514897 HMGXB3Q12766 1538 aa22.04■■□□□ 1.12
TSC22D3-217ENST00000514897 NESP48681 1621 aa22.01■■□□□ 1.11
TSC22D3-217ENST00000514897 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
TSC22D3-217ENST00000514897 BAZ1AQ9NRL2 1556 aaPredicted RBP21.95■■□□□ 1.11
TSC22D3-217ENST00000514897 PEG3Q9GZU2 1588 aa21.82■■□□□ 1.08
TSC22D3-217ENST00000514897 MROH2BQ7Z745 1585 aa21.8■■□□□ 1.08
TSC22D3-217ENST00000514897 LAMC3Q9Y6N6 1575 aa21.77■■□□□ 1.08
TSC22D3-217ENST00000514897 THOC2Q8NI27 1593 aaKnown RBP21.76■■□□□ 1.07
TSC22D3-217ENST00000514897 KIF21AQ7Z4S6 1674 aa21.7■■□□□ 1.06
TSC22D3-217ENST00000514897 PDS5BQ9NTI5 1447 aa21.69■■□□□ 1.06
TSC22D3-217ENST00000514897 CADPSQ9ULU8 1353 aa21.59■■□□□ 1.05
TSC22D3-217ENST00000514897 WIZO95785 1651 aa21.55■■□□□ 1.04
TSC22D3-217ENST00000514897 MRC2Q9UBG0 1479 aa21.5■■□□□ 1.03
TSC22D3-217ENST00000514897 RSF1Q96T23 1441 aaPredicted RBP21.47■■□□□ 1.03
TSC22D3-217ENST00000514897 TRIM41Q8WV44 630 aa21.45■■□□□ 1.02
TSC22D3-217ENST00000514897 WDR62O43379 1518 aa21.42■■□□□ 1.02
TSC22D3-217ENST00000514897 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
TSC22D3-217ENST00000514897 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
TSC22D3-217ENST00000514897 TOP2AP11388 1531 aaKnown RBP21.28■■□□□ 1
TSC22D3-217ENST00000514897 CFTRP13569 1480 aa21.27■■□□□ 1
TSC22D3-217ENST00000514897 OSCARQ8IYS5 282 aa21.2■□□□□ 0.98
TSC22D3-217ENST00000514897 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
TSC22D3-217ENST00000514897 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
TSC22D3-217ENST00000514897 CCDC88BA6NC98 1476 aa21.02■□□□□ 0.96
TSC22D3-217ENST00000514897 SENP3Q9H4L4 574 aaPredicted RBP21.01■□□□□ 0.95
TSC22D3-217ENST00000514897 ZNF608Q9ULD9 1512 aaPredicted RBP20.96■□□□□ 0.95
TSC22D3-217ENST00000514897 IFT140Q96RY7 1462 aa20.95■□□□□ 0.94
TSC22D3-217ENST00000514897 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
TSC22D3-217ENST00000514897 RIMBP3CA6NJZ7 1639 aa20.89■□□□□ 0.94
TSC22D3-217ENST00000514897 RIMBP3BA6NNM3 1639 aa20.89■□□□□ 0.94
TSC22D3-217ENST00000514897 RIMBP3Q9UFD9 1639 aa20.89■□□□□ 0.94
TSC22D3-217ENST00000514897 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
TSC22D3-217ENST00000514897 ABCC8Q09428 1581 aa20.85■□□□□ 0.93
TSC22D3-217ENST00000514897 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
TSC22D3-217ENST00000514897 DNMBPQ6XZF7 1577 aa20.81■□□□□ 0.92
TSC22D3-217ENST00000514897 ARHGEF11O15085 1522 aa20.8■□□□□ 0.92
TSC22D3-217ENST00000514897 AQRO60306 1485 aaKnown RBP eCLIP20.77■□□□□ 0.92
TSC22D3-217ENST00000514897 FBLN2P98095 1184 aa20.76■□□□□ 0.91
TSC22D3-217ENST00000514897 CYB5RLQ6IPT4 315 aa20.75■□□□□ 0.91
TSC22D3-217ENST00000514897 PHF23Q9BUL5 403 aaPredicted RBP20.74■□□□□ 0.91
TSC22D3-217ENST00000514897 TARBP1Q13395 1621 aaKnown RBP20.72■□□□□ 0.91
TSC22D3-217ENST00000514897 CHD1O14646 1710 aa20.72■□□□□ 0.91
TSC22D3-217ENST00000514897 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
TSC22D3-217ENST00000514897 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
TSC22D3-217ENST00000514897 SOGA1O94964 1423 aa20.63■□□□□ 0.89
TSC22D3-217ENST00000514897 TDRD9Q8NDG6 1382 aaKnown RBP20.63■□□□□ 0.89
TSC22D3-217ENST00000514897 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
TSC22D3-217ENST00000514897 ARAP1Q96P48 1450 aa20.58■□□□□ 0.89
TSC22D3-217ENST00000514897 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
TSC22D3-217ENST00000514897 CHMP7Q8WUX9 453 aaPredicted RBP20.54■□□□□ 0.88
TSC22D3-217ENST00000514897 SNAPC4Q5SXM2 1469 aa20.53■□□□□ 0.88
TSC22D3-217ENST00000514897 CUX1P39880 1505 aa20.48■□□□□ 0.87
TSC22D3-217ENST00000514897 WDR97A6NE52 1622 aa20.45■□□□□ 0.87
TSC22D3-217ENST00000514897 GRIN2BQ13224 1484 aa20.44■□□□□ 0.86
TSC22D3-217ENST00000514897 MAGI1Q96QZ7 1491 aaPredicted RBP20.44■□□□□ 0.86
TSC22D3-217ENST00000514897 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
TSC22D3-217ENST00000514897 SYNJ1O43426 1573 aa20.43■□□□□ 0.86
TSC22D3-217ENST00000514897 SYNJ2O15056 1496 aa20.39■□□□□ 0.85
TSC22D3-217ENST00000514897 GAPVD1Q14C86 1478 aa20.36■□□□□ 0.85
TSC22D3-217ENST00000514897 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
TSC22D3-217ENST00000514897 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.84
TSC22D3-217ENST00000514897 ABCA5Q8WWZ7 1642 aa20.24■□□□□ 0.83
TSC22D3-217ENST00000514897 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
TSC22D3-217ENST00000514897 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
TSC22D3-217ENST00000514897 TOP2BQ02880 1626 aa20.22■□□□□ 0.83
TSC22D3-217ENST00000514897 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
TSC22D3-217ENST00000514897 ERCC6L2Q5T890 1561 aa20.14■□□□□ 0.81
TSC22D3-217ENST00000514897 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
TSC22D3-217ENST00000514897 CEP170Q5SW79 1584 aa20.11■□□□□ 0.81
TSC22D3-217ENST00000514897 NUP160Q12769 1436 aa20.09■□□□□ 0.81
TSC22D3-217ENST00000514897 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
TSC22D3-217ENST00000514897 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.79
TSC22D3-217ENST00000514897 SHROOM2Q13796 1616 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms