RNA–Protein interactions for RNA: ENST00000513322.5

ATG12-212, Transcript of autophagy related 12, humanhuman

TSL 3

Gene ATG12, Length 1,558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG12-212ENST00000513322 NISCHQ9Y2I1 1504 aa47.03■■■■■ 5.12
ATG12-212ENST00000513322 CCDC180Q9P1Z9 1646 aa40.94■■■■■ 4.14
ATG12-212ENST00000513322 ZCCHC6Q5VYS8 1495 aaKnown RBP39.59■■■■□ 3.93
ATG12-212ENST00000513322 DCAF1Q9Y4B6 1507 aa38.97■■■■□ 3.83
ATG12-212ENST00000513322 DCAF8L2P0C7V8 631 aa38.52■■■■□ 3.76
ATG12-212ENST00000513322 SHROOM4Q9ULL8 1493 aa38.42■■■■□ 3.74
ATG12-212ENST00000513322 MYO15BQ96JP2 1530 aa38.4■■■■□ 3.74
ATG12-212ENST00000513322 ABCC9O60706 1549 aa38.23■■■■□ 3.71
ATG12-212ENST00000513322 NACADO15069 1562 aa38.01■■■■□ 3.68
ATG12-212ENST00000513322 RB1CC1Q8TDY2 1594 aa37.59■■■■□ 3.61
ATG12-212ENST00000513322 SCRIBQ14160 1630 aa37.56■■■■□ 3.6
ATG12-212ENST00000513322 SUPT5HO00267 1087 aaKnown RBP37.14■■■■□ 3.54
ATG12-212ENST00000513322 UNC13AQ9UPW8 1703 aa36.83■■■■□ 3.49
ATG12-212ENST00000513322 RSF1Q96T23 1441 aaPredicted RBP36.58■■■■□ 3.45
ATG12-212ENST00000513322 CECR2Q9BXF3 1484 aa36.44■■■■□ 3.42
ATG12-212ENST00000513322 BICRAQ9NZM4 1560 aa36.42■■■■□ 3.42
ATG12-212ENST00000513322 BAZ1AQ9NRL2 1556 aaPredicted RBP36.31■■■■□ 3.4
ATG12-212ENST00000513322 MROH2BQ7Z745 1585 aa36.3■■■■□ 3.4
ATG12-212ENST00000513322 SMARCA4P51532 1647 aa36.09■■■■□ 3.37
ATG12-212ENST00000513322 PABPN1Q86U42 306 aaKnown RBP eCLIP36.06■■■■□ 3.36
ATG12-212ENST00000513322 WIZO95785 1651 aa36.02■■■■□ 3.36
ATG12-212ENST00000513322 CHIC1Q5VXU3 224 aa35.81■■■■□ 3.32
ATG12-212ENST00000513322 TOP2AP11388 1531 aaKnown RBP35.73■■■■□ 3.31
ATG12-212ENST00000513322 PEG3Q9GZU2 1588 aa35.68■■■■□ 3.3
ATG12-212ENST00000513322 SMARCA2P51531 1590 aa35.42■■■■□ 3.26
ATG12-212ENST00000513322 ATAD2BQ9ULI0 1458 aa35.39■■■■□ 3.26
ATG12-212ENST00000513322 CCDC88BA6NC98 1476 aa35.31■■■■□ 3.24
ATG12-212ENST00000513322 EIF4G1Q04637 1599 aaKnown RBP35.29■■■■□ 3.24
ATG12-212ENST00000513322 BAZ1BQ9UIG0 1483 aaKnown RBP35.2■■■■□ 3.23
ATG12-212ENST00000513322 HMGXB3Q12766 1538 aa35.07■■■■□ 3.21
ATG12-212ENST00000513322 NCAPD3P42695 1498 aa35.05■■■■□ 3.2
ATG12-212ENST00000513322 TRIM41Q8WV44 630 aa34.96■■■■□ 3.19
ATG12-212ENST00000513322 CC2D2AQ9P2K1 1620 aa34.67■■■■□ 3.14
ATG12-212ENST00000513322 ABCC8Q09428 1581 aa34.63■■■■□ 3.13
ATG12-212ENST00000513322 WRNQ14191 1432 aaPredicted RBP eCLIP34.42■■■■□ 3.1
ATG12-212ENST00000513322 LOC105371045A0A1W2PR82 267 aa34.36■■■■□ 3.09
ATG12-212ENST00000513322 CFTRP13569 1480 aa34.35■■■■□ 3.09
ATG12-212ENST00000513322 PRDM2Q13029 1718 aa34.29■■■■□ 3.08
ATG12-212ENST00000513322 SYNJ1O43426 1573 aa34.27■■■■□ 3.08
ATG12-212ENST00000513322 FAM9AQ8IZU1 332 aaPredicted RBP34.24■■■■□ 3.07
ATG12-212ENST00000513322 EEA1Q15075 1411 aa34.2■■■■□ 3.07
ATG12-212ENST00000513322 TOP2BQ02880 1626 aa34.15■■■■□ 3.06
ATG12-212ENST00000513322 CADPSQ9ULU8 1353 aa34.15■■■■□ 3.06
ATG12-212ENST00000513322 BIVM-ERCC5R4GMW8 1640 aa34.14■■■■□ 3.06
ATG12-212ENST00000513322 SOGA1O94964 1423 aa34.04■■■■□ 3.04
ATG12-212ENST00000513322 CUX1P39880 1505 aa33.94■■■■□ 3.02
ATG12-212ENST00000513322 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
ATG12-212ENST00000513322 CSRNP3Q8WYN3 585 aa33.86■■■■□ 3.01
ATG12-212ENST00000513322 LAMC3Q9Y6N6 1575 aa33.83■■■■□ 3.01
ATG12-212ENST00000513322 FANCD2Q9BXW9 1451 aa33.76■■■■□ 3
ATG12-212ENST00000513322 KIF21BO75037 1637 aa33.72■■■□□ 2.99
ATG12-212ENST00000513322 GOLGA3Q08378 1498 aa33.69■■■□□ 2.98
ATG12-212ENST00000513322 NESP48681 1621 aa33.67■■■□□ 2.98
ATG12-212ENST00000513322 CEP164Q9UPV0 1460 aa33.67■■■□□ 2.98
ATG12-212ENST00000513322 EHMT2Q96KQ7 1210 aa33.66■■■□□ 2.98
ATG12-212ENST00000513322 TNIKQ9UKE5 1360 aa33.64■■■□□ 2.98
ATG12-212ENST00000513322 DNMBPQ6XZF7 1577 aa33.58■■■□□ 2.97
ATG12-212ENST00000513322 KIF27Q86VH2 1401 aa33.54■■■□□ 2.96
ATG12-212ENST00000513322 PDS5BQ9NTI5 1447 aa33.52■■■□□ 2.96
ATG12-212ENST00000513322 DNAJC5BQ9UF47 199 aa33.51■■■□□ 2.96
ATG12-212ENST00000513322 FGD5Q6ZNL6 1462 aa33.51■■■□□ 2.96
ATG12-212ENST00000513322 CEP162Q5TB80 1403 aa33.45■■■□□ 2.95
ATG12-212ENST00000513322 TOPBP1Q92547 1522 aa33.45■■■□□ 2.95
ATG12-212ENST00000513322 ERICH3Q5RHP9 1530 aa33.44■■■□□ 2.94
ATG12-212ENST00000513322 UBTFP17480 764 aaKnown RBP33.41■■■□□ 2.94
ATG12-212ENST00000513322 PRXQ9BXM0 1461 aa33.41■■■□□ 2.94
ATG12-212ENST00000513322 RAPGEF2Q9Y4G8 1499 aa33.36■■■□□ 2.93
ATG12-212ENST00000513322 CUX2O14529 1486 aa33.34■■■□□ 2.93
ATG12-212ENST00000513322 KIF21AQ7Z4S6 1674 aa33.34■■■□□ 2.93
ATG12-212ENST00000513322 URB2Q14146 1524 aaKnown RBP33.32■■■□□ 2.92
ATG12-212ENST00000513322 POLA1P09884 1462 aaPredicted RBP33.3■■■□□ 2.92
ATG12-212ENST00000513322 ABCA10Q8WWZ4 1543 aa33.27■■■□□ 2.92
ATG12-212ENST00000513322 TRIM26Q12899 539 aaPredicted RBP33.17■■■□□ 2.9
ATG12-212ENST00000513322 IGF1RP08069 1367 aa33.17■■■□□ 2.9
ATG12-212ENST00000513322 WDR97A6NE52 1622 aa33.16■■■□□ 2.9
ATG12-212ENST00000513322 PCGF6Q9BYE7 350 aa33.15■■■□□ 2.9
ATG12-212ENST00000513322 RAD54L2Q9Y4B4 1467 aa33.15■■■□□ 2.9
ATG12-212ENST00000513322 CLIP1P30622 1438 aa33.12■■■□□ 2.89
ATG12-212ENST00000513322 MRC2Q9UBG0 1479 aa33.08■■■□□ 2.89
ATG12-212ENST00000513322 CARMIL1Q5VZK9 1371 aa33.02■■■□□ 2.88
ATG12-212ENST00000513322 CUL7Q14999 1698 aa32.99■■■□□ 2.87
ATG12-212ENST00000513322 ABCA5Q8WWZ7 1642 aa32.98■■■□□ 2.87
ATG12-212ENST00000513322 TARBP1Q13395 1621 aaKnown RBP32.95■■■□□ 2.86
ATG12-212ENST00000513322 WDR62O43379 1518 aa32.91■■■□□ 2.86
ATG12-212ENST00000513322 VPS8Q8N3P4 1428 aa32.91■■■□□ 2.86
ATG12-212ENST00000513322 GAPVD1Q14C86 1478 aa32.84■■■□□ 2.85
ATG12-212ENST00000513322 TDRD9Q8NDG6 1382 aaKnown RBP32.77■■■□□ 2.84
ATG12-212ENST00000513322 ERCC6Q03468 1493 aa32.77■■■□□ 2.84
ATG12-212ENST00000513322 ARAP1Q96P48 1450 aa32.77■■■□□ 2.84
ATG12-212ENST00000513322 IFT140Q96RY7 1462 aa32.74■■■□□ 2.83
ATG12-212ENST00000513322 THOC2Q8NI27 1593 aaKnown RBP32.72■■■□□ 2.83
ATG12-212ENST00000513322 ARHGAP35Q9NRY4 1499 aa32.69■■■□□ 2.82
ATG12-212ENST00000513322 PBRM1Q86U86 1689 aa32.68■■■□□ 2.82
ATG12-212ENST00000513322 PPARGC1BQ86YN6 1023 aaKnown RBP32.66■■■□□ 2.82
ATG12-212ENST00000513322 CTTNBP2Q8WZ74 1663 aa32.65■■■□□ 2.82
ATG12-212ENST00000513322 RANGAP1P46060 587 aaPredicted RBP32.65■■■□□ 2.82
ATG12-212ENST00000513322 HRCP23327 699 aa32.57■■■□□ 2.8
ATG12-212ENST00000513322 GRIN2BQ13224 1484 aa32.56■■■□□ 2.8
ATG12-212ENST00000513322 EFCAB5A4FU69 1503 aa32.53■■■□□ 2.8
ATG12-212ENST00000513322 APLP2Q06481 763 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms