RNA–Protein interactions for RNA: ENST00000511248.1

PRKAA1-208, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 2

Gene PRKAA1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-208ENST00000511248 NISCHQ9Y2I1 1504 aa25.47■■□□□ 1.67
PRKAA1-208ENST00000511248 ABCC9O60706 1549 aa23■■□□□ 1.27
PRKAA1-208ENST00000511248 CCDC180Q9P1Z9 1646 aa22.86■■□□□ 1.25
PRKAA1-208ENST00000511248 AEBP2Q6ZN18 517 aaPredicted RBP21.85■■□□□ 1.09
PRKAA1-208ENST00000511248 RB1CC1Q8TDY2 1594 aa21.82■■□□□ 1.08
PRKAA1-208ENST00000511248 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
PRKAA1-208ENST00000511248 NACADO15069 1562 aa21.65■■□□□ 1.06
PRKAA1-208ENST00000511248 DCAF8L2P0C7V8 631 aa21.52■■□□□ 1.04
PRKAA1-208ENST00000511248 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
PRKAA1-208ENST00000511248 MYO15BQ96JP2 1530 aa21.33■■□□□ 1
PRKAA1-208ENST00000511248 UNC13AQ9UPW8 1703 aa21.29■■□□□ 1
PRKAA1-208ENST00000511248 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
PRKAA1-208ENST00000511248 ZCCHC6Q5VYS8 1495 aaKnown RBP21.11■□□□□ 0.97
PRKAA1-208ENST00000511248 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
PRKAA1-208ENST00000511248 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
PRKAA1-208ENST00000511248 SHROOM4Q9ULL8 1493 aa20.9■□□□□ 0.94
PRKAA1-208ENST00000511248 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
PRKAA1-208ENST00000511248 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
PRKAA1-208ENST00000511248 CECR2Q9BXF3 1484 aa20.73■□□□□ 0.91
PRKAA1-208ENST00000511248 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
PRKAA1-208ENST00000511248 DNAJC5Q9H3Z4 198 aa20.27■□□□□ 0.84
PRKAA1-208ENST00000511248 NCAPD3P42695 1498 aa20.01■□□□□ 0.79
PRKAA1-208ENST00000511248 CUX2O14529 1486 aa19.94■□□□□ 0.78
PRKAA1-208ENST00000511248 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
PRKAA1-208ENST00000511248 SMARCA4P51532 1647 aa19.88■□□□□ 0.77
PRKAA1-208ENST00000511248 SMARCA2P51531 1590 aa19.86■□□□□ 0.77
PRKAA1-208ENST00000511248 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
PRKAA1-208ENST00000511248 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
PRKAA1-208ENST00000511248 BAZ1AQ9NRL2 1556 aaPredicted RBP19.76■□□□□ 0.75
PRKAA1-208ENST00000511248 NESP48681 1621 aa19.74■□□□□ 0.75
PRKAA1-208ENST00000511248 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
PRKAA1-208ENST00000511248 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
PRKAA1-208ENST00000511248 MROH2BQ7Z745 1585 aa19.64■□□□□ 0.73
PRKAA1-208ENST00000511248 THOC2Q8NI27 1593 aaKnown RBP19.54■□□□□ 0.72
PRKAA1-208ENST00000511248 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
PRKAA1-208ENST00000511248 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
PRKAA1-208ENST00000511248 KIF21AQ7Z4S6 1674 aa19.44■□□□□ 0.7
PRKAA1-208ENST00000511248 CADPSQ9ULU8 1353 aa19.4■□□□□ 0.7
PRKAA1-208ENST00000511248 WIZO95785 1651 aa19.38■□□□□ 0.69
PRKAA1-208ENST00000511248 MRC2Q9UBG0 1479 aa19.3■□□□□ 0.68
PRKAA1-208ENST00000511248 WDR62O43379 1518 aa19.26■□□□□ 0.67
PRKAA1-208ENST00000511248 RSF1Q96T23 1441 aaPredicted RBP19.21■□□□□ 0.67
PRKAA1-208ENST00000511248 TRIM41Q8WV44 630 aa19.2■□□□□ 0.66
PRKAA1-208ENST00000511248 CEP164Q9UPV0 1460 aa19.2■□□□□ 0.66
PRKAA1-208ENST00000511248 FANCD2Q9BXW9 1451 aa19.18■□□□□ 0.66
PRKAA1-208ENST00000511248 CFTRP13569 1480 aa19.17■□□□□ 0.66
PRKAA1-208ENST00000511248 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
PRKAA1-208ENST00000511248 OSCARQ8IYS5 282 aa19.07■□□□□ 0.64
PRKAA1-208ENST00000511248 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
PRKAA1-208ENST00000511248 CCDC88BA6NC98 1476 aa18.93■□□□□ 0.62
PRKAA1-208ENST00000511248 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
PRKAA1-208ENST00000511248 ZNF608Q9ULD9 1512 aaPredicted RBP18.84■□□□□ 0.61
PRKAA1-208ENST00000511248 IFT140Q96RY7 1462 aa18.82■□□□□ 0.6
PRKAA1-208ENST00000511248 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
PRKAA1-208ENST00000511248 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
PRKAA1-208ENST00000511248 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
PRKAA1-208ENST00000511248 EIF4G3O43432 1585 aaKnown RBP18.69■□□□□ 0.58
PRKAA1-208ENST00000511248 RIMBP3CA6NJZ7 1639 aa18.67■□□□□ 0.58
PRKAA1-208ENST00000511248 RIMBP3BA6NNM3 1639 aa18.67■□□□□ 0.58
PRKAA1-208ENST00000511248 RIMBP3Q9UFD9 1639 aa18.67■□□□□ 0.58
PRKAA1-208ENST00000511248 TARBP1Q13395 1621 aaKnown RBP18.64■□□□□ 0.57
PRKAA1-208ENST00000511248 AQRO60306 1485 aaKnown RBP eCLIP18.64■□□□□ 0.57
PRKAA1-208ENST00000511248 ARHGEF11O15085 1522 aa18.64■□□□□ 0.57
PRKAA1-208ENST00000511248 POLA1P09884 1462 aaPredicted RBP18.61■□□□□ 0.57
PRKAA1-208ENST00000511248 CYB5RLQ6IPT4 315 aa18.59■□□□□ 0.57
PRKAA1-208ENST00000511248 RAD54L2Q9Y4B4 1467 aa18.55■□□□□ 0.56
PRKAA1-208ENST00000511248 SENP3Q9H4L4 574 aaPredicted RBP18.55■□□□□ 0.56
PRKAA1-208ENST00000511248 CHD1O14646 1710 aa18.54■□□□□ 0.56
PRKAA1-208ENST00000511248 PHF23Q9BUL5 403 aaPredicted RBP18.52■□□□□ 0.56
PRKAA1-208ENST00000511248 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.55
PRKAA1-208ENST00000511248 SOGA1O94964 1423 aa18.51■□□□□ 0.55
PRKAA1-208ENST00000511248 FBLN2P98095 1184 aa18.51■□□□□ 0.55
PRKAA1-208ENST00000511248 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
PRKAA1-208ENST00000511248 CUX1P39880 1505 aa18.47■□□□□ 0.55
PRKAA1-208ENST00000511248 TRHP20396 242 aaPredicted RBP18.46■□□□□ 0.55
PRKAA1-208ENST00000511248 ARAP1Q96P48 1450 aa18.46■□□□□ 0.54
PRKAA1-208ENST00000511248 SNAPC4Q5SXM2 1469 aa18.44■□□□□ 0.54
PRKAA1-208ENST00000511248 WDR97A6NE52 1622 aa18.41■□□□□ 0.54
PRKAA1-208ENST00000511248 MAGI1Q96QZ7 1491 aaPredicted RBP18.38■□□□□ 0.53
PRKAA1-208ENST00000511248 CLASP1Q7Z460 1538 aa18.37■□□□□ 0.53
PRKAA1-208ENST00000511248 GRIN2BQ13224 1484 aa18.36■□□□□ 0.53
PRKAA1-208ENST00000511248 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
PRKAA1-208ENST00000511248 SYNJ2O15056 1496 aa18.33■□□□□ 0.52
PRKAA1-208ENST00000511248 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
PRKAA1-208ENST00000511248 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
PRKAA1-208ENST00000511248 SUPT5HO00267 1087 aaKnown RBP18.27■□□□□ 0.52
PRKAA1-208ENST00000511248 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
PRKAA1-208ENST00000511248 PBRM1Q86U86 1689 aa18.25■□□□□ 0.51
PRKAA1-208ENST00000511248 ABCA5Q8WWZ7 1642 aa18.24■□□□□ 0.51
PRKAA1-208ENST00000511248 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
PRKAA1-208ENST00000511248 GRIN2AQ12879 1464 aa18.14■□□□□ 0.49
PRKAA1-208ENST00000511248 TOP2BQ02880 1626 aa18.12■□□□□ 0.49
PRKAA1-208ENST00000511248 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
PRKAA1-208ENST00000511248 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
PRKAA1-208ENST00000511248 ERCC6L2Q5T890 1561 aa18.09■□□□□ 0.49
PRKAA1-208ENST00000511248 NUP160Q12769 1436 aa18.09■□□□□ 0.49
PRKAA1-208ENST00000511248 CEP170Q5SW79 1584 aa18.08■□□□□ 0.48
PRKAA1-208ENST00000511248 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
PRKAA1-208ENST00000511248 ERICH3Q5RHP9 1530 aa18.02■□□□□ 0.47
PRKAA1-208ENST00000511248 SHROOM2Q13796 1616 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms