RNA–Protein interactions for RNA: ENST00000509694.1

KLHL3-210, Transcript of kelch like family member 3, humanhuman

TSL 5

Gene KLHL3, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-210ENST00000509694 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
KLHL3-210ENST00000509694 CCDC180Q9P1Z9 1646 aa19.51■□□□□ 0.71
KLHL3-210ENST00000509694 ABCC9O60706 1549 aa19.03■□□□□ 0.64
KLHL3-210ENST00000509694 AEBP2Q6ZN18 517 aaPredicted RBP18.71■□□□□ 0.59
KLHL3-210ENST00000509694 RB1CC1Q8TDY2 1594 aa18.31■□□□□ 0.52
KLHL3-210ENST00000509694 NACADO15069 1562 aa18.27■□□□□ 0.52
KLHL3-210ENST00000509694 ZCCHC6Q5VYS8 1495 aaKnown RBP18.18■□□□□ 0.5
KLHL3-210ENST00000509694 MYO15BQ96JP2 1530 aa18.13■□□□□ 0.49
KLHL3-210ENST00000509694 DCAF8L2P0C7V8 631 aa18.09■□□□□ 0.49
KLHL3-210ENST00000509694 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
KLHL3-210ENST00000509694 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
KLHL3-210ENST00000509694 CHIC1Q5VXU3 224 aa17.96■□□□□ 0.47
KLHL3-210ENST00000509694 BICRAQ9NZM4 1560 aa17.81■□□□□ 0.44
KLHL3-210ENST00000509694 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
KLHL3-210ENST00000509694 PABPN1Q86U42 306 aaKnown RBP eCLIP17.71■□□□□ 0.43
KLHL3-210ENST00000509694 SHROOM4Q9ULL8 1493 aa17.56■□□□□ 0.4
KLHL3-210ENST00000509694 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
KLHL3-210ENST00000509694 EIF4G1Q04637 1599 aaKnown RBP17.32■□□□□ 0.36
KLHL3-210ENST00000509694 CC2D2AQ9P2K1 1620 aa17.27■□□□□ 0.36
KLHL3-210ENST00000509694 CECR2Q9BXF3 1484 aa17.09■□□□□ 0.33
KLHL3-210ENST00000509694 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
KLHL3-210ENST00000509694 BAZ1AQ9NRL2 1556 aaPredicted RBP16.91■□□□□ 0.3
KLHL3-210ENST00000509694 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
KLHL3-210ENST00000509694 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
KLHL3-210ENST00000509694 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
KLHL3-210ENST00000509694 PEG3Q9GZU2 1588 aa16.81■□□□□ 0.28
KLHL3-210ENST00000509694 NCAPD3P42695 1498 aa16.81■□□□□ 0.28
KLHL3-210ENST00000509694 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
KLHL3-210ENST00000509694 WIZO95785 1651 aa16.69■□□□□ 0.26
KLHL3-210ENST00000509694 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
KLHL3-210ENST00000509694 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
KLHL3-210ENST00000509694 NESP48681 1621 aa16.48■□□□□ 0.23
KLHL3-210ENST00000509694 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
KLHL3-210ENST00000509694 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
KLHL3-210ENST00000509694 KIF21AQ7Z4S6 1674 aa16.38■□□□□ 0.21
KLHL3-210ENST00000509694 ERCC6Q03468 1493 aa16.38■□□□□ 0.21
KLHL3-210ENST00000509694 THOC2Q8NI27 1593 aaKnown RBP16.31■□□□□ 0.2
KLHL3-210ENST00000509694 CADPSQ9ULU8 1353 aa16.29■□□□□ 0.2
KLHL3-210ENST00000509694 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
KLHL3-210ENST00000509694 CUX2O14529 1486 aa16.25■□□□□ 0.19
KLHL3-210ENST00000509694 PDS5BQ9NTI5 1447 aa16.24■□□□□ 0.19
KLHL3-210ENST00000509694 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
KLHL3-210ENST00000509694 CFTRP13569 1480 aa16.22■□□□□ 0.19
KLHL3-210ENST00000509694 FANCD2Q9BXW9 1451 aa16.15■□□□□ 0.18
KLHL3-210ENST00000509694 MRC2Q9UBG0 1479 aa16.14■□□□□ 0.17
KLHL3-210ENST00000509694 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
KLHL3-210ENST00000509694 WDR62O43379 1518 aa16.13■□□□□ 0.17
KLHL3-210ENST00000509694 URB2Q14146 1524 aaKnown RBP16.03■□□□□ 0.16
KLHL3-210ENST00000509694 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.16
KLHL3-210ENST00000509694 TOPBP1Q92547 1522 aa15.91■□□□□ 0.14
KLHL3-210ENST00000509694 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
KLHL3-210ENST00000509694 ABCC8Q09428 1581 aa15.85■□□□□ 0.13
KLHL3-210ENST00000509694 PHF23Q9BUL5 403 aaPredicted RBP15.85■□□□□ 0.13
KLHL3-210ENST00000509694 TARBP1Q13395 1621 aaKnown RBP15.79■□□□□ 0.12
KLHL3-210ENST00000509694 CUX1P39880 1505 aa15.79■□□□□ 0.12
KLHL3-210ENST00000509694 IFT140Q96RY7 1462 aa15.79■□□□□ 0.12
KLHL3-210ENST00000509694 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.12
KLHL3-210ENST00000509694 POLA1P09884 1462 aaPredicted RBP15.77■□□□□ 0.11
KLHL3-210ENST00000509694 EIF4G3O43432 1585 aaKnown RBP15.76■□□□□ 0.11
KLHL3-210ENST00000509694 ZNF608Q9ULD9 1512 aaPredicted RBP15.76■□□□□ 0.11
KLHL3-210ENST00000509694 DNAJC5Q9H3Z4 198 aa15.73■□□□□ 0.11
KLHL3-210ENST00000509694 WDR97A6NE52 1622 aa15.72■□□□□ 0.11
KLHL3-210ENST00000509694 FGD5Q6ZNL6 1462 aa15.72■□□□□ 0.11
KLHL3-210ENST00000509694 BIVM-ERCC5R4GMW8 1640 aa15.7■□□□□ 0.1
KLHL3-210ENST00000509694 RAD54L2Q9Y4B4 1467 aa15.69■□□□□ 0.1
KLHL3-210ENST00000509694 SYNJ1O43426 1573 aa15.67■□□□□ 0.1
KLHL3-210ENST00000509694 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
KLHL3-210ENST00000509694 SOGA1O94964 1423 aa15.64■□□□□ 0.09
KLHL3-210ENST00000509694 AQRO60306 1485 aaKnown RBP eCLIP15.63■□□□□ 0.09
KLHL3-210ENST00000509694 CHD1O14646 1710 aa15.62■□□□□ 0.09
KLHL3-210ENST00000509694 PBRM1Q86U86 1689 aa15.61■□□□□ 0.09
KLHL3-210ENST00000509694 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
KLHL3-210ENST00000509694 ABCA5Q8WWZ7 1642 aa15.58■□□□□ 0.09
KLHL3-210ENST00000509694 TDRD9Q8NDG6 1382 aaKnown RBP15.56■□□□□ 0.08
KLHL3-210ENST00000509694 ABCA10Q8WWZ4 1543 aa15.56■□□□□ 0.08
KLHL3-210ENST00000509694 SNAPC4Q5SXM2 1469 aa15.51■□□□□ 0.07
KLHL3-210ENST00000509694 GRIN2BQ13224 1484 aa15.49■□□□□ 0.07
KLHL3-210ENST00000509694 GAPVD1Q14C86 1478 aa15.49■□□□□ 0.07
KLHL3-210ENST00000509694 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
KLHL3-210ENST00000509694 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
KLHL3-210ENST00000509694 ADAMTS12P58397 1594 aa15.43■□□□□ 0.06
KLHL3-210ENST00000509694 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
KLHL3-210ENST00000509694 RIMBP3CA6NJZ7 1639 aa15.39■□□□□ 0.05
KLHL3-210ENST00000509694 RIMBP3BA6NNM3 1639 aa15.39■□□□□ 0.05
KLHL3-210ENST00000509694 RIMBP3Q9UFD9 1639 aa15.39■□□□□ 0.05
KLHL3-210ENST00000509694 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
KLHL3-210ENST00000509694 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
KLHL3-210ENST00000509694 FBLN2P98095 1184 aa15.37■□□□□ 0.05
KLHL3-210ENST00000509694 ARHGEF11O15085 1522 aa15.34■□□□□ 0.05
KLHL3-210ENST00000509694 GRIN2AQ12879 1464 aa15.33■□□□□ 0.04
KLHL3-210ENST00000509694 CHMP7Q8WUX9 453 aaPredicted RBP15.31■□□□□ 0.04
KLHL3-210ENST00000509694 FHAD1B1AJZ9 1412 aa15.3■□□□□ 0.04
KLHL3-210ENST00000509694 CEP170Q5SW79 1584 aa15.3■□□□□ 0.04
KLHL3-210ENST00000509694 CUL7Q14999 1698 aa15.28■□□□□ 0.04
KLHL3-210ENST00000509694 KIF27Q86VH2 1401 aa15.26■□□□□ 0.03
KLHL3-210ENST00000509694 NUP160Q12769 1436 aa15.25■□□□□ 0.03
KLHL3-210ENST00000509694 SHROOM2Q13796 1616 aa15.22■□□□□ 0.03
KLHL3-210ENST00000509694 ARAP1Q96P48 1450 aa15.21■□□□□ 0.03
KLHL3-210ENST00000509694 RUSC2Q8N2Y8 1516 aa15.21■□□□□ 0.03
KLHL3-210ENST00000509694 IGF1RP08069 1367 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms