RNA–Protein interactions for RNA: ENST00000506836.5

LINC01948-201, Transcript of long intergenic non-protein coding RNA 1948, humanhuman

TSL 2 BASIC

Gene LINC01948, Length 656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01948-201ENST00000506836 NISCHQ9Y2I1 1504 aa20.63■□□□□ 0.89
LINC01948-201ENST00000506836 AEBP2Q6ZN18 517 aaPredicted RBP18.73■□□□□ 0.59
LINC01948-201ENST00000506836 CCDC180Q9P1Z9 1646 aa18.53■□□□□ 0.56
LINC01948-201ENST00000506836 ABCC9O60706 1549 aa18.52■□□□□ 0.56
LINC01948-201ENST00000506836 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
LINC01948-201ENST00000506836 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
LINC01948-201ENST00000506836 NACADO15069 1562 aa17.56■□□□□ 0.4
LINC01948-201ENST00000506836 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
LINC01948-201ENST00000506836 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
LINC01948-201ENST00000506836 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
LINC01948-201ENST00000506836 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
LINC01948-201ENST00000506836 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
LINC01948-201ENST00000506836 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
LINC01948-201ENST00000506836 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
LINC01948-201ENST00000506836 BICRAQ9NZM4 1560 aa17.06■□□□□ 0.32
LINC01948-201ENST00000506836 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
LINC01948-201ENST00000506836 SCRIBQ14160 1630 aa16.84■□□□□ 0.29
LINC01948-201ENST00000506836 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
LINC01948-201ENST00000506836 CC2D2AQ9P2K1 1620 aa16.71■□□□□ 0.27
LINC01948-201ENST00000506836 EIF4G1Q04637 1599 aaKnown RBP16.71■□□□□ 0.27
LINC01948-201ENST00000506836 NCAPD3P42695 1498 aa16.21■□□□□ 0.19
LINC01948-201ENST00000506836 ATAD2BQ9ULI0 1458 aa16.14■□□□□ 0.17
LINC01948-201ENST00000506836 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
LINC01948-201ENST00000506836 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
LINC01948-201ENST00000506836 SMARCA4P51532 1647 aa16.08■□□□□ 0.16
LINC01948-201ENST00000506836 CUX2O14529 1486 aa16.07■□□□□ 0.16
LINC01948-201ENST00000506836 ERCC6Q03468 1493 aa16.07■□□□□ 0.16
LINC01948-201ENST00000506836 BAZ1AQ9NRL2 1556 aaPredicted RBP16.06■□□□□ 0.16
LINC01948-201ENST00000506836 SENP3Q9H4L4 574 aaPredicted RBP16.03■□□□□ 0.16
LINC01948-201ENST00000506836 BAZ1BQ9UIG0 1483 aaKnown RBP16■□□□□ 0.15
LINC01948-201ENST00000506836 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
LINC01948-201ENST00000506836 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.15
LINC01948-201ENST00000506836 MROH2BQ7Z745 1585 aa15.86■□□□□ 0.13
LINC01948-201ENST00000506836 NESP48681 1621 aa15.86■□□□□ 0.13
LINC01948-201ENST00000506836 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.13
LINC01948-201ENST00000506836 PHF23Q9BUL5 403 aaPredicted RBP15.8■□□□□ 0.12
LINC01948-201ENST00000506836 PDS5BQ9NTI5 1447 aa15.79■□□□□ 0.12
LINC01948-201ENST00000506836 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
LINC01948-201ENST00000506836 CADPSQ9ULU8 1353 aa15.72■□□□□ 0.11
LINC01948-201ENST00000506836 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
LINC01948-201ENST00000506836 WIZO95785 1651 aa15.61■□□□□ 0.09
LINC01948-201ENST00000506836 KIF21AQ7Z4S6 1674 aa15.61■□□□□ 0.09
LINC01948-201ENST00000506836 CEP164Q9UPV0 1460 aa15.58■□□□□ 0.08
LINC01948-201ENST00000506836 WDR62O43379 1518 aa15.58■□□□□ 0.08
LINC01948-201ENST00000506836 RSF1Q96T23 1441 aaPredicted RBP15.56■□□□□ 0.08
LINC01948-201ENST00000506836 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
LINC01948-201ENST00000506836 CFTRP13569 1480 aa15.52■□□□□ 0.08
LINC01948-201ENST00000506836 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.08
LINC01948-201ENST00000506836 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
LINC01948-201ENST00000506836 CCDC88BA6NC98 1476 aa15.31■□□□□ 0.04
LINC01948-201ENST00000506836 OSCARQ8IYS5 282 aa15.29■□□□□ 0.04
LINC01948-201ENST00000506836 TRIM41Q8WV44 630 aa15.28■□□□□ 0.04
LINC01948-201ENST00000506836 IFT140Q96RY7 1462 aa15.27■□□□□ 0.04
LINC01948-201ENST00000506836 PRDM2Q13029 1718 aa15.26■□□□□ 0.03
LINC01948-201ENST00000506836 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
LINC01948-201ENST00000506836 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
LINC01948-201ENST00000506836 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
LINC01948-201ENST00000506836 ZNF608Q9ULD9 1512 aaPredicted RBP15.16■□□□□ 0.02
LINC01948-201ENST00000506836 EIF4G3O43432 1585 aaKnown RBP15.1■□□□□ 0.01
LINC01948-201ENST00000506836 POLA1P09884 1462 aaPredicted RBP15.06■□□□□ 0
LINC01948-201ENST00000506836 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
LINC01948-201ENST00000506836 ARHGEF11O15085 1522 aa15.02■□□□□ -0
LINC01948-201ENST00000506836 AQRO60306 1485 aaKnown RBP eCLIP15.02■□□□□ -0
LINC01948-201ENST00000506836 RIMBP3CA6NJZ7 1639 aa15.02□□□□□ -0.01
LINC01948-201ENST00000506836 RIMBP3BA6NNM3 1639 aa15.02□□□□□ -0.01
LINC01948-201ENST00000506836 RIMBP3Q9UFD9 1639 aa15.02□□□□□ -0.01
LINC01948-201ENST00000506836 WDR97A6NE52 1622 aa15□□□□□ -0.01
LINC01948-201ENST00000506836 SOGA1O94964 1423 aa15□□□□□ -0.01
LINC01948-201ENST00000506836 FBLN2P98095 1184 aa14.96□□□□□ -0.01
LINC01948-201ENST00000506836 FOXD1Q16676 465 aa14.96□□□□□ -0.01
LINC01948-201ENST00000506836 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
LINC01948-201ENST00000506836 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
LINC01948-201ENST00000506836 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
LINC01948-201ENST00000506836 SNAPC4Q5SXM2 1469 aa14.92□□□□□ -0.02
LINC01948-201ENST00000506836 MAGI1Q96QZ7 1491 aaPredicted RBP14.92□□□□□ -0.02
LINC01948-201ENST00000506836 CUX1P39880 1505 aa14.92□□□□□ -0.02
LINC01948-201ENST00000506836 GRIN2BQ13224 1484 aa14.91□□□□□ -0.02
LINC01948-201ENST00000506836 CHD1O14646 1710 aa14.9□□□□□ -0.02
LINC01948-201ENST00000506836 CYB5RLQ6IPT4 315 aa14.89□□□□□ -0.03
LINC01948-201ENST00000506836 CHMP7Q8WUX9 453 aaPredicted RBP14.88□□□□□ -0.03
LINC01948-201ENST00000506836 ARAP1Q96P48 1450 aa14.87□□□□□ -0.03
LINC01948-201ENST00000506836 SYNJ1O43426 1573 aa14.86□□□□□ -0.03
LINC01948-201ENST00000506836 SYNJ2O15056 1496 aa14.85□□□□□ -0.03
LINC01948-201ENST00000506836 CLASP1Q7Z460 1538 aa14.83□□□□□ -0.04
LINC01948-201ENST00000506836 ABCA10Q8WWZ4 1543 aa14.82□□□□□ -0.04
LINC01948-201ENST00000506836 SUPT5HO00267 1087 aaKnown RBP14.82□□□□□ -0.04
LINC01948-201ENST00000506836 GAPVD1Q14C86 1478 aa14.82□□□□□ -0.04
LINC01948-201ENST00000506836 WRNQ14191 1432 aaPredicted RBP eCLIP14.78□□□□□ -0.04
LINC01948-201ENST00000506836 ABCA5Q8WWZ7 1642 aa14.76□□□□□ -0.05
LINC01948-201ENST00000506836 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
LINC01948-201ENST00000506836 PBRM1Q86U86 1689 aa14.73□□□□□ -0.05
LINC01948-201ENST00000506836 GRIN2AQ12879 1464 aa14.69□□□□□ -0.06
LINC01948-201ENST00000506836 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
LINC01948-201ENST00000506836 ADAMTS12P58397 1594 aa14.67□□□□□ -0.06
LINC01948-201ENST00000506836 FHAD1B1AJZ9 1412 aa14.66□□□□□ -0.06
LINC01948-201ENST00000506836 BIVM-ERCC5R4GMW8 1640 aa14.66□□□□□ -0.06
LINC01948-201ENST00000506836 NUP160Q12769 1436 aa14.65□□□□□ -0.06
LINC01948-201ENST00000506836 ERICH3Q5RHP9 1530 aa14.64□□□□□ -0.07
LINC01948-201ENST00000506836 CEP170Q5SW79 1584 aa14.59□□□□□ -0.07
LINC01948-201ENST00000506836 SHROOM2Q13796 1616 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms