RNA–Protein interactions for RNA: ENST00000506250.1

LINC02056-201, Transcript of long intergenic non-protein coding RNA 2056, humanhuman

TSL 2

Gene LINC02056, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02056-201ENST00000506250 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
LINC02056-201ENST00000506250 ABCC9O60706 1549 aa16.46■□□□□ 0.23
LINC02056-201ENST00000506250 DNAJC5BQ9UF47 199 aa16.02■□□□□ 0.16
LINC02056-201ENST00000506250 CCDC180Q9P1Z9 1646 aa15.92■□□□□ 0.14
LINC02056-201ENST00000506250 RB1CC1Q8TDY2 1594 aa15.43■□□□□ 0.06
LINC02056-201ENST00000506250 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC02056-201ENST00000506250 NACADO15069 1562 aa15.19■□□□□ 0.02
LINC02056-201ENST00000506250 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
LINC02056-201ENST00000506250 UNC13AQ9UPW8 1703 aa15.07■□□□□ 0
LINC02056-201ENST00000506250 BICRAQ9NZM4 1560 aa15.03■□□□□ -0
LINC02056-201ENST00000506250 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
LINC02056-201ENST00000506250 CECR2Q9BXF3 1484 aa14.92□□□□□ -0.02
LINC02056-201ENST00000506250 DCAF8L2P0C7V8 631 aa14.87□□□□□ -0.03
LINC02056-201ENST00000506250 CC2D2AQ9P2K1 1620 aa14.85□□□□□ -0.03
LINC02056-201ENST00000506250 MYO15BQ96JP2 1530 aa14.84□□□□□ -0.03
LINC02056-201ENST00000506250 SHROOM4Q9ULL8 1493 aa14.81□□□□□ -0.04
LINC02056-201ENST00000506250 EIF4G1Q04637 1599 aaKnown RBP14.69□□□□□ -0.06
LINC02056-201ENST00000506250 CUX2O14529 1486 aa14.49□□□□□ -0.09
LINC02056-201ENST00000506250 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
LINC02056-201ENST00000506250 SCRIBQ14160 1630 aa14.41□□□□□ -0.1
LINC02056-201ENST00000506250 ZCCHC6Q5VYS8 1495 aaKnown RBP14.34□□□□□ -0.11
LINC02056-201ENST00000506250 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
LINC02056-201ENST00000506250 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
LINC02056-201ENST00000506250 NCAPD3P42695 1498 aa14.06□□□□□ -0.16
LINC02056-201ENST00000506250 CHIC1Q5VXU3 224 aa14.04□□□□□ -0.16
LINC02056-201ENST00000506250 NESP48681 1621 aa13.99□□□□□ -0.17
LINC02056-201ENST00000506250 THOC2Q8NI27 1593 aaKnown RBP13.98□□□□□ -0.17
LINC02056-201ENST00000506250 ATAD2BQ9ULI0 1458 aa13.91□□□□□ -0.18
LINC02056-201ENST00000506250 HMGXB3Q12766 1538 aa13.89□□□□□ -0.19
LINC02056-201ENST00000506250 SMARCA2P51531 1590 aa13.83□□□□□ -0.2
LINC02056-201ENST00000506250 LAMC3Q9Y6N6 1575 aa13.8□□□□□ -0.2
LINC02056-201ENST00000506250 KIF21AQ7Z4S6 1674 aa13.77□□□□□ -0.21
LINC02056-201ENST00000506250 PDS5BQ9NTI5 1447 aa13.74□□□□□ -0.21
LINC02056-201ENST00000506250 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
LINC02056-201ENST00000506250 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.21
LINC02056-201ENST00000506250 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
LINC02056-201ENST00000506250 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
LINC02056-201ENST00000506250 MRC2Q9UBG0 1479 aa13.67□□□□□ -0.22
LINC02056-201ENST00000506250 WDR62O43379 1518 aa13.66□□□□□ -0.22
LINC02056-201ENST00000506250 PEG3Q9GZU2 1588 aa13.64□□□□□ -0.23
LINC02056-201ENST00000506250 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.23
LINC02056-201ENST00000506250 RIMBP3CA6NJZ7 1639 aa13.58□□□□□ -0.24
LINC02056-201ENST00000506250 RIMBP3BA6NNM3 1639 aa13.58□□□□□ -0.24
LINC02056-201ENST00000506250 RIMBP3Q9UFD9 1639 aa13.58□□□□□ -0.24
LINC02056-201ENST00000506250 ARHGEF11O15085 1522 aa13.49□□□□□ -0.25
LINC02056-201ENST00000506250 CEP164Q9UPV0 1460 aa13.47□□□□□ -0.25
LINC02056-201ENST00000506250 MROH2BQ7Z745 1585 aa13.42□□□□□ -0.26
LINC02056-201ENST00000506250 FANCD2Q9BXW9 1451 aa13.41□□□□□ -0.26
LINC02056-201ENST00000506250 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
LINC02056-201ENST00000506250 CYB5RLQ6IPT4 315 aa13.38□□□□□ -0.27
LINC02056-201ENST00000506250 URB2Q14146 1524 aaKnown RBP13.35□□□□□ -0.27
LINC02056-201ENST00000506250 ARAP1Q96P48 1450 aa13.32□□□□□ -0.28
LINC02056-201ENST00000506250 CFTRP13569 1480 aa13.31□□□□□ -0.28
LINC02056-201ENST00000506250 ZNF608Q9ULD9 1512 aaPredicted RBP13.28□□□□□ -0.28
LINC02056-201ENST00000506250 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
LINC02056-201ENST00000506250 RSF1Q96T23 1441 aaPredicted RBP13.23□□□□□ -0.29
LINC02056-201ENST00000506250 WIZO95785 1651 aa13.21□□□□□ -0.3
LINC02056-201ENST00000506250 CHD1O14646 1710 aa13.16□□□□□ -0.3
LINC02056-201ENST00000506250 EIF4G3O43432 1585 aaKnown RBP13.15□□□□□ -0.3
LINC02056-201ENST00000506250 TOPBP1Q92547 1522 aa13.09□□□□□ -0.31
LINC02056-201ENST00000506250 PRDM2Q13029 1718 aa13.09□□□□□ -0.31
LINC02056-201ENST00000506250 AQRO60306 1485 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC02056-201ENST00000506250 CLASP1Q7Z460 1538 aa13.04□□□□□ -0.32
LINC02056-201ENST00000506250 FBLN2P98095 1184 aa13.04□□□□□ -0.32
LINC02056-201ENST00000506250 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
LINC02056-201ENST00000506250 TARBP1Q13395 1621 aaKnown RBP13.03□□□□□ -0.32
LINC02056-201ENST00000506250 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
LINC02056-201ENST00000506250 ILDR1Q86SU0 546 aaPredicted RBP13.02□□□□□ -0.33
LINC02056-201ENST00000506250 DNMBPQ6XZF7 1577 aa12.98□□□□□ -0.33
LINC02056-201ENST00000506250 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
LINC02056-201ENST00000506250 GAPVD1Q14C86 1478 aa12.93□□□□□ -0.34
LINC02056-201ENST00000506250 POLA1P09884 1462 aaPredicted RBP12.92□□□□□ -0.34
LINC02056-201ENST00000506250 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
LINC02056-201ENST00000506250 TDRD9Q8NDG6 1382 aaKnown RBP12.89□□□□□ -0.35
LINC02056-201ENST00000506250 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
LINC02056-201ENST00000506250 SENP3Q9H4L4 574 aaPredicted RBP12.88□□□□□ -0.35
LINC02056-201ENST00000506250 MAGI1Q96QZ7 1491 aaPredicted RBP12.88□□□□□ -0.35
LINC02056-201ENST00000506250 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
LINC02056-201ENST00000506250 CCDC88BA6NC98 1476 aa12.87□□□□□ -0.35
LINC02056-201ENST00000506250 RAD54L2Q9Y4B4 1467 aa12.87□□□□□ -0.35
LINC02056-201ENST00000506250 SYNJ2O15056 1496 aa12.85□□□□□ -0.35
LINC02056-201ENST00000506250 SOGA1O94964 1423 aa12.83□□□□□ -0.36
LINC02056-201ENST00000506250 KIF13AQ9H1H9 1805 aa12.81□□□□□ -0.36
LINC02056-201ENST00000506250 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
LINC02056-201ENST00000506250 KDM4FA0A1W2PPD8 638 aa12.81□□□□□ -0.36
LINC02056-201ENST00000506250 ERCC6L2Q5T890 1561 aa12.77□□□□□ -0.37
LINC02056-201ENST00000506250 FGD5Q6ZNL6 1462 aa12.74□□□□□ -0.37
LINC02056-201ENST00000506250 CEP170Q5SW79 1584 aa12.69□□□□□ -0.38
LINC02056-201ENST00000506250 PBRM1Q86U86 1689 aa12.68□□□□□ -0.38
LINC02056-201ENST00000506250 ABCC10Q5T3U5 1492 aa12.67□□□□□ -0.38
LINC02056-201ENST00000506250 SHROOM2Q13796 1616 aa12.66□□□□□ -0.38
LINC02056-201ENST00000506250 NUP160Q12769 1436 aa12.65□□□□□ -0.38
LINC02056-201ENST00000506250 FAM69CQ0P6D2 419 aa12.65□□□□□ -0.38
LINC02056-201ENST00000506250 CUX1P39880 1505 aa12.65□□□□□ -0.38
LINC02056-201ENST00000506250 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
LINC02056-201ENST00000506250 PHF23Q9BUL5 403 aaPredicted RBP12.64□□□□□ -0.39
LINC02056-201ENST00000506250 KDM6BO15054 1643 aa12.62□□□□□ -0.39
LINC02056-201ENST00000506250 ABCA5Q8WWZ7 1642 aa12.62□□□□□ -0.39
LINC02056-201ENST00000506250 DIP2BQ9P265 1576 aa12.61□□□□□ -0.39
LINC02056-201ENST00000506250 MAPKBP1O60336 1514 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms