RNA–Protein interactions for RNA: ENST00000504121.5

SLC1A3-205, Transcript of solute carrier family 1 member 3, humanhuman

TSL 2

Gene SLC1A3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-205ENST00000504121 NISCHQ9Y2I1 1504 aa24.31■■□□□ 1.48
SLC1A3-205ENST00000504121 CCDC180Q9P1Z9 1646 aa21.94■■□□□ 1.1
SLC1A3-205ENST00000504121 ABCC9O60706 1549 aa21.77■■□□□ 1.08
SLC1A3-205ENST00000504121 RB1CC1Q8TDY2 1594 aa20.9■□□□□ 0.94
SLC1A3-205ENST00000504121 NACADO15069 1562 aa20.8■□□□□ 0.92
SLC1A3-205ENST00000504121 MYO15BQ96JP2 1530 aa20.65■□□□□ 0.9
SLC1A3-205ENST00000504121 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
SLC1A3-205ENST00000504121 DCAF8L2P0C7V8 631 aa20.32■□□□□ 0.84
SLC1A3-205ENST00000504121 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.84
SLC1A3-205ENST00000504121 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
SLC1A3-205ENST00000504121 SHROOM4Q9ULL8 1493 aa20.25■□□□□ 0.83
SLC1A3-205ENST00000504121 UNC13AQ9UPW8 1703 aa20.22■□□□□ 0.83
SLC1A3-205ENST00000504121 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
SLC1A3-205ENST00000504121 BICRAQ9NZM4 1560 aa20.18■□□□□ 0.82
SLC1A3-205ENST00000504121 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
SLC1A3-205ENST00000504121 CECR2Q9BXF3 1484 aa19.74■□□□□ 0.75
SLC1A3-205ENST00000504121 CC2D2AQ9P2K1 1620 aa19.74■□□□□ 0.75
SLC1A3-205ENST00000504121 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
SLC1A3-205ENST00000504121 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
SLC1A3-205ENST00000504121 AEBP2Q6ZN18 517 aaPredicted RBP19.28■□□□□ 0.68
SLC1A3-205ENST00000504121 NCAPD3P42695 1498 aa19.22■□□□□ 0.67
SLC1A3-205ENST00000504121 DNAJC5Q9H3Z4 198 aa19.13■□□□□ 0.65
SLC1A3-205ENST00000504121 CUX2O14529 1486 aa19.08■□□□□ 0.64
SLC1A3-205ENST00000504121 SMARCA2P51531 1590 aa19.05■□□□□ 0.64
SLC1A3-205ENST00000504121 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
SLC1A3-205ENST00000504121 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
SLC1A3-205ENST00000504121 BAZ1AQ9NRL2 1556 aaPredicted RBP18.93■□□□□ 0.62
SLC1A3-205ENST00000504121 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
SLC1A3-205ENST00000504121 PEG3Q9GZU2 1588 aa18.92■□□□□ 0.62
SLC1A3-205ENST00000504121 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
SLC1A3-205ENST00000504121 BAZ1BQ9UIG0 1483 aaKnown RBP18.81■□□□□ 0.6
SLC1A3-205ENST00000504121 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
SLC1A3-205ENST00000504121 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
SLC1A3-205ENST00000504121 NESP48681 1621 aa18.63■□□□□ 0.57
SLC1A3-205ENST00000504121 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
SLC1A3-205ENST00000504121 THOC2Q8NI27 1593 aaKnown RBP18.59■□□□□ 0.57
SLC1A3-205ENST00000504121 CADPSQ9ULU8 1353 aa18.57■□□□□ 0.56
SLC1A3-205ENST00000504121 MRC2Q9UBG0 1479 aa18.42■□□□□ 0.54
SLC1A3-205ENST00000504121 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
SLC1A3-205ENST00000504121 WDR62O43379 1518 aa18.39■□□□□ 0.54
SLC1A3-205ENST00000504121 CFTRP13569 1480 aa18.34■□□□□ 0.53
SLC1A3-205ENST00000504121 WIZO95785 1651 aa18.32■□□□□ 0.52
SLC1A3-205ENST00000504121 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
SLC1A3-205ENST00000504121 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
SLC1A3-205ENST00000504121 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
SLC1A3-205ENST00000504121 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
SLC1A3-205ENST00000504121 OSCARQ8IYS5 282 aa18.15■□□□□ 0.5
SLC1A3-205ENST00000504121 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
SLC1A3-205ENST00000504121 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
SLC1A3-205ENST00000504121 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
SLC1A3-205ENST00000504121 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
SLC1A3-205ENST00000504121 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
SLC1A3-205ENST00000504121 CCDC88BA6NC98 1476 aa17.98■□□□□ 0.47
SLC1A3-205ENST00000504121 TRIM41Q8WV44 630 aa17.96■□□□□ 0.47
SLC1A3-205ENST00000504121 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
SLC1A3-205ENST00000504121 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
SLC1A3-205ENST00000504121 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
SLC1A3-205ENST00000504121 WDR97A6NE52 1622 aa17.8■□□□□ 0.44
SLC1A3-205ENST00000504121 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
SLC1A3-205ENST00000504121 RIMBP3CA6NJZ7 1639 aa17.75■□□□□ 0.43
SLC1A3-205ENST00000504121 RIMBP3BA6NNM3 1639 aa17.75■□□□□ 0.43
SLC1A3-205ENST00000504121 RIMBP3Q9UFD9 1639 aa17.75■□□□□ 0.43
SLC1A3-205ENST00000504121 EIF4G3O43432 1585 aaKnown RBP17.74■□□□□ 0.43
SLC1A3-205ENST00000504121 ARHGEF11O15085 1522 aa17.74■□□□□ 0.43
SLC1A3-205ENST00000504121 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
SLC1A3-205ENST00000504121 SOGA1O94964 1423 aa17.66■□□□□ 0.42
SLC1A3-205ENST00000504121 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
SLC1A3-205ENST00000504121 MAGI1Q96QZ7 1491 aaPredicted RBP17.62■□□□□ 0.41
SLC1A3-205ENST00000504121 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
SLC1A3-205ENST00000504121 CHD1O14646 1710 aa17.58■□□□□ 0.4
SLC1A3-205ENST00000504121 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
SLC1A3-205ENST00000504121 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
SLC1A3-205ENST00000504121 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
SLC1A3-205ENST00000504121 TDRD9Q8NDG6 1382 aaKnown RBP17.54■□□□□ 0.4
SLC1A3-205ENST00000504121 ARAP1Q96P48 1450 aa17.53■□□□□ 0.4
SLC1A3-205ENST00000504121 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
SLC1A3-205ENST00000504121 SYNJ1O43426 1573 aa17.53■□□□□ 0.4
SLC1A3-205ENST00000504121 FBLN2P98095 1184 aa17.52■□□□□ 0.4
SLC1A3-205ENST00000504121 CHMP7Q8WUX9 453 aaPredicted RBP17.52■□□□□ 0.4
SLC1A3-205ENST00000504121 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
SLC1A3-205ENST00000504121 CLASP1Q7Z460 1538 aa17.51■□□□□ 0.39
SLC1A3-205ENST00000504121 SLC24A1O60721 1099 aa17.5■□□□□ 0.39
SLC1A3-205ENST00000504121 CUX1P39880 1505 aa17.5■□□□□ 0.39
SLC1A3-205ENST00000504121 SNAPC4Q5SXM2 1469 aa17.49■□□□□ 0.39
SLC1A3-205ENST00000504121 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
SLC1A3-205ENST00000504121 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
SLC1A3-205ENST00000504121 WRNQ14191 1432 aaPredicted RBP eCLIP17.38■□□□□ 0.37
SLC1A3-205ENST00000504121 ABCA5Q8WWZ7 1642 aa17.37■□□□□ 0.37
SLC1A3-205ENST00000504121 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
SLC1A3-205ENST00000504121 PBRM1Q86U86 1689 aa17.33■□□□□ 0.37
SLC1A3-205ENST00000504121 NUP160Q12769 1436 aa17.3■□□□□ 0.36
SLC1A3-205ENST00000504121 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
SLC1A3-205ENST00000504121 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
SLC1A3-205ENST00000504121 FHAD1B1AJZ9 1412 aa17.28■□□□□ 0.36
SLC1A3-205ENST00000504121 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
SLC1A3-205ENST00000504121 BIVM-ERCC5R4GMW8 1640 aa17.27■□□□□ 0.36
SLC1A3-205ENST00000504121 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
SLC1A3-205ENST00000504121 SHROOM2Q13796 1616 aa17.2■□□□□ 0.34
SLC1A3-205ENST00000504121 SUPT5HO00267 1087 aaKnown RBP17.17■□□□□ 0.34
SLC1A3-205ENST00000504121 CEP170Q5SW79 1584 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms