RNA–Protein interactions for RNA: ENST00000503738.5

GPN1-209, Transcript of GPN-loop GTPase 1, humanhuman

TSL 5 BASIC

Gene GPN1, Length 984 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-209ENST00000503738 NISCHQ9Y2I1 1504 aa24.58■■□□□ 1.53
GPN1-209ENST00000503738 ABCC9O60706 1549 aa22.41■■□□□ 1.18
GPN1-209ENST00000503738 CCDC180Q9P1Z9 1646 aa22.37■■□□□ 1.17
GPN1-209ENST00000503738 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
GPN1-209ENST00000503738 AEBP2Q6ZN18 517 aaPredicted RBP21.28■■□□□ 1
GPN1-209ENST00000503738 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
GPN1-209ENST00000503738 NACADO15069 1562 aa21.16■□□□□ 0.98
GPN1-209ENST00000503738 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
GPN1-209ENST00000503738 MYO15BQ96JP2 1530 aa20.85■□□□□ 0.93
GPN1-209ENST00000503738 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
GPN1-209ENST00000503738 PABPN1Q86U42 306 aaKnown RBP eCLIP20.69■□□□□ 0.9
GPN1-209ENST00000503738 SHROOM4Q9ULL8 1493 aa20.58■□□□□ 0.89
GPN1-209ENST00000503738 DCAF8L2P0C7V8 631 aa20.58■□□□□ 0.89
GPN1-209ENST00000503738 DCAF1Q9Y4B6 1507 aa20.42■□□□□ 0.86
GPN1-209ENST00000503738 CC2D2AQ9P2K1 1620 aa20.34■□□□□ 0.85
GPN1-209ENST00000503738 ZCCHC6Q5VYS8 1495 aaKnown RBP20.32■□□□□ 0.84
GPN1-209ENST00000503738 CECR2Q9BXF3 1484 aa20.29■□□□□ 0.84
GPN1-209ENST00000503738 EIF4G1Q04637 1599 aaKnown RBP20.23■□□□□ 0.83
GPN1-209ENST00000503738 SCRIBQ14160 1630 aa20.13■□□□□ 0.81
GPN1-209ENST00000503738 CHIC1Q5VXU3 224 aa20.02■□□□□ 0.8
GPN1-209ENST00000503738 DNAJC5Q9H3Z4 198 aa19.88■□□□□ 0.77
GPN1-209ENST00000503738 CUX2O14529 1486 aa19.63■□□□□ 0.73
GPN1-209ENST00000503738 NCAPD3P42695 1498 aa19.49■□□□□ 0.71
GPN1-209ENST00000503738 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
GPN1-209ENST00000503738 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
GPN1-209ENST00000503738 SMARCA2P51531 1590 aa19.34■□□□□ 0.69
GPN1-209ENST00000503738 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.68
GPN1-209ENST00000503738 SMARCA4P51532 1647 aa19.27■□□□□ 0.68
GPN1-209ENST00000503738 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
GPN1-209ENST00000503738 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
GPN1-209ENST00000503738 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
GPN1-209ENST00000503738 BAZ1AQ9NRL2 1556 aaPredicted RBP19.15■□□□□ 0.66
GPN1-209ENST00000503738 NESP48681 1621 aa19.14■□□□□ 0.66
GPN1-209ENST00000503738 BAZ1BQ9UIG0 1483 aaKnown RBP19.12■□□□□ 0.65
GPN1-209ENST00000503738 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
GPN1-209ENST00000503738 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
GPN1-209ENST00000503738 MROH2BQ7Z745 1585 aa18.86■□□□□ 0.61
GPN1-209ENST00000503738 WDR62O43379 1518 aa18.84■□□□□ 0.61
GPN1-209ENST00000503738 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.6
GPN1-209ENST00000503738 CADPSQ9ULU8 1353 aa18.82■□□□□ 0.6
GPN1-209ENST00000503738 TRIM41Q8WV44 630 aa18.7■□□□□ 0.58
GPN1-209ENST00000503738 CEP164Q9UPV0 1460 aa18.68■□□□□ 0.58
GPN1-209ENST00000503738 WIZO95785 1651 aa18.63■□□□□ 0.57
GPN1-209ENST00000503738 FANCD2Q9BXW9 1451 aa18.59■□□□□ 0.57
GPN1-209ENST00000503738 CFTRP13569 1480 aa18.58■□□□□ 0.57
GPN1-209ENST00000503738 OSCARQ8IYS5 282 aa18.53■□□□□ 0.56
GPN1-209ENST00000503738 PRDM2Q13029 1718 aa18.52■□□□□ 0.55
GPN1-209ENST00000503738 URB2Q14146 1524 aaKnown RBP18.46■□□□□ 0.55
GPN1-209ENST00000503738 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
GPN1-209ENST00000503738 RIMBP3CA6NJZ7 1639 aa18.4■□□□□ 0.54
GPN1-209ENST00000503738 RIMBP3BA6NNM3 1639 aa18.4■□□□□ 0.54
GPN1-209ENST00000503738 RIMBP3Q9UFD9 1639 aa18.4■□□□□ 0.54
GPN1-209ENST00000503738 RSF1Q96T23 1441 aaPredicted RBP18.35■□□□□ 0.53
GPN1-209ENST00000503738 SENP3Q9H4L4 574 aaPredicted RBP18.35■□□□□ 0.53
GPN1-209ENST00000503738 IFT140Q96RY7 1462 aa18.33■□□□□ 0.53
GPN1-209ENST00000503738 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
GPN1-209ENST00000503738 ABCC8Q09428 1581 aa18.26■□□□□ 0.51
GPN1-209ENST00000503738 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
GPN1-209ENST00000503738 EIF4G3O43432 1585 aaKnown RBP18.23■□□□□ 0.51
GPN1-209ENST00000503738 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
GPN1-209ENST00000503738 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
GPN1-209ENST00000503738 CCDC88BA6NC98 1476 aa18.16■□□□□ 0.5
GPN1-209ENST00000503738 CHD1O14646 1710 aa18.16■□□□□ 0.5
GPN1-209ENST00000503738 TARBP1Q13395 1621 aaKnown RBP18.15■□□□□ 0.5
GPN1-209ENST00000503738 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
GPN1-209ENST00000503738 WDR97A6NE52 1622 aa18.07■□□□□ 0.48
GPN1-209ENST00000503738 CYB5RLQ6IPT4 315 aa18.03■□□□□ 0.48
GPN1-209ENST00000503738 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.47
GPN1-209ENST00000503738 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
GPN1-209ENST00000503738 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
GPN1-209ENST00000503738 CLASP1Q7Z460 1538 aa17.97■□□□□ 0.47
GPN1-209ENST00000503738 SYNJ1O43426 1573 aa17.92■□□□□ 0.46
GPN1-209ENST00000503738 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
GPN1-209ENST00000503738 MAGI1Q96QZ7 1491 aaPredicted RBP17.91■□□□□ 0.46
GPN1-209ENST00000503738 SOGA1O94964 1423 aa17.88■□□□□ 0.45
GPN1-209ENST00000503738 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
GPN1-209ENST00000503738 FBLN2P98095 1184 aa17.86■□□□□ 0.45
GPN1-209ENST00000503738 RAD54L2Q9Y4B4 1467 aa17.86■□□□□ 0.45
GPN1-209ENST00000503738 SYNJ2O15056 1496 aa17.82■□□□□ 0.44
GPN1-209ENST00000503738 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
GPN1-209ENST00000503738 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
GPN1-209ENST00000503738 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
GPN1-209ENST00000503738 PBRM1Q86U86 1689 aa17.79■□□□□ 0.44
GPN1-209ENST00000503738 CUX1P39880 1505 aa17.77■□□□□ 0.43
GPN1-209ENST00000503738 CHMP7Q8WUX9 453 aaPredicted RBP17.76■□□□□ 0.43
GPN1-209ENST00000503738 GAPVD1Q14C86 1478 aa17.72■□□□□ 0.43
GPN1-209ENST00000503738 ABCA5Q8WWZ7 1642 aa17.71■□□□□ 0.43
GPN1-209ENST00000503738 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
GPN1-209ENST00000503738 SHROOM2Q13796 1616 aa17.6■□□□□ 0.41
GPN1-209ENST00000503738 GRIN2AQ12879 1464 aa17.59■□□□□ 0.41
GPN1-209ENST00000503738 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
GPN1-209ENST00000503738 NUP160Q12769 1436 aa17.57■□□□□ 0.4
GPN1-209ENST00000503738 CEP170Q5SW79 1584 aa17.56■□□□□ 0.4
GPN1-209ENST00000503738 KIF13AQ9H1H9 1805 aa17.54■□□□□ 0.4
GPN1-209ENST00000503738 ERCC6L2Q5T890 1561 aa17.53■□□□□ 0.4
GPN1-209ENST00000503738 BIVM-ERCC5R4GMW8 1640 aa17.5■□□□□ 0.39
GPN1-209ENST00000503738 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
GPN1-209ENST00000503738 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
GPN1-209ENST00000503738 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
GPN1-209ENST00000503738 TOP2BQ02880 1626 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms