RNA–Protein interactions for RNA: ENST00000503450.1

SCFD2-203, Transcript of sec1 family domain containing 2, humanhuman

TSL 4

Gene SCFD2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-203ENST00000503450 NISCHQ9Y2I1 1504 aa13.05□□□□□ -0.32
SCFD2-203ENST00000503450 CCDC180Q9P1Z9 1646 aa11.6□□□□□ -0.55
SCFD2-203ENST00000503450 ABCC9O60706 1549 aa11.45□□□□□ -0.58
SCFD2-203ENST00000503450 RB1CC1Q8TDY2 1594 aa10.94□□□□□ -0.66
SCFD2-203ENST00000503450 NACADO15069 1562 aa10.92□□□□□ -0.66
SCFD2-203ENST00000503450 ZCCHC6Q5VYS8 1495 aaKnown RBP10.88□□□□□ -0.67
SCFD2-203ENST00000503450 MYO15BQ96JP2 1530 aa10.87□□□□□ -0.67
SCFD2-203ENST00000503450 DCAF1Q9Y4B6 1507 aa10.79□□□□□ -0.68
SCFD2-203ENST00000503450 DCAF8L2P0C7V8 631 aa10.78□□□□□ -0.68
SCFD2-203ENST00000503450 UNC13AQ9UPW8 1703 aa10.74□□□□□ -0.69
SCFD2-203ENST00000503450 BICRAQ9NZM4 1560 aa10.72□□□□□ -0.69
SCFD2-203ENST00000503450 PABPN1Q86U42 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
SCFD2-203ENST00000503450 DNAJC5BQ9UF47 199 aa10.64□□□□□ -0.71
SCFD2-203ENST00000503450 SCRIBQ14160 1630 aa10.6□□□□□ -0.71
SCFD2-203ENST00000503450 SHROOM4Q9ULL8 1493 aa10.52□□□□□ -0.73
SCFD2-203ENST00000503450 EIF4G1Q04637 1599 aaKnown RBP10.39□□□□□ -0.75
SCFD2-203ENST00000503450 CC2D2AQ9P2K1 1620 aa10.35□□□□□ -0.75
SCFD2-203ENST00000503450 AEBP2Q6ZN18 517 aaPredicted RBP10.34□□□□□ -0.75
SCFD2-203ENST00000503450 CECR2Q9BXF3 1484 aa10.29□□□□□ -0.76
SCFD2-203ENST00000503450 CHIC1Q5VXU3 224 aa10.27□□□□□ -0.77
SCFD2-203ENST00000503450 SMARCA4P51532 1647 aa10.14□□□□□ -0.79
SCFD2-203ENST00000503450 NCAPD3P42695 1498 aa10.11□□□□□ -0.79
SCFD2-203ENST00000503450 ATAD2BQ9ULI0 1458 aa10.11□□□□□ -0.79
SCFD2-203ENST00000503450 BAZ1AQ9NRL2 1556 aaPredicted RBP10.09□□□□□ -0.79
SCFD2-203ENST00000503450 MROH2BQ7Z745 1585 aa10.08□□□□□ -0.8
SCFD2-203ENST00000503450 PEG3Q9GZU2 1588 aa10.06□□□□□ -0.8
SCFD2-203ENST00000503450 HMGXB3Q12766 1538 aa10.05□□□□□ -0.8
SCFD2-203ENST00000503450 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
SCFD2-203ENST00000503450 BAZ1BQ9UIG0 1483 aaKnown RBP9.98□□□□□ -0.81
SCFD2-203ENST00000503450 WIZO95785 1651 aa9.93□□□□□ -0.82
SCFD2-203ENST00000503450 RSF1Q96T23 1441 aaPredicted RBP9.92□□□□□ -0.82
SCFD2-203ENST00000503450 NESP48681 1621 aa9.92□□□□□ -0.82
SCFD2-203ENST00000503450 TOP2AP11388 1531 aaKnown RBP9.83□□□□□ -0.84
SCFD2-203ENST00000503450 LAMC3Q9Y6N6 1575 aa9.82□□□□□ -0.84
SCFD2-203ENST00000503450 ERCC6Q03468 1493 aa9.8□□□□□ -0.84
SCFD2-203ENST00000503450 THOC2Q8NI27 1593 aaKnown RBP9.8□□□□□ -0.84
SCFD2-203ENST00000503450 CADPSQ9ULU8 1353 aa9.78□□□□□ -0.84
SCFD2-203ENST00000503450 CUX2O14529 1486 aa9.78□□□□□ -0.84
SCFD2-203ENST00000503450 KIF21AQ7Z4S6 1674 aa9.76□□□□□ -0.85
SCFD2-203ENST00000503450 CFTRP13569 1480 aa9.74□□□□□ -0.85
SCFD2-203ENST00000503450 PDS5BQ9NTI5 1447 aa9.73□□□□□ -0.85
SCFD2-203ENST00000503450 CCDC88BA6NC98 1476 aa9.71□□□□□ -0.86
SCFD2-203ENST00000503450 WDR62O43379 1518 aa9.68□□□□□ -0.86
SCFD2-203ENST00000503450 FANCD2Q9BXW9 1451 aa9.68□□□□□ -0.86
SCFD2-203ENST00000503450 MRC2Q9UBG0 1479 aa9.68□□□□□ -0.86
SCFD2-203ENST00000503450 CEP164Q9UPV0 1460 aa9.66□□□□□ -0.86
SCFD2-203ENST00000503450 URB2Q14146 1524 aaKnown RBP9.63□□□□□ -0.87
SCFD2-203ENST00000503450 DNAJC5Q9H3Z4 198 aa9.63□□□□□ -0.87
SCFD2-203ENST00000503450 PRDM2Q13029 1718 aa9.6□□□□□ -0.87
SCFD2-203ENST00000503450 TOPBP1Q92547 1522 aa9.53□□□□□ -0.88
SCFD2-203ENST00000503450 SUPT5HO00267 1087 aaKnown RBP9.5□□□□□ -0.89
SCFD2-203ENST00000503450 DNMBPQ6XZF7 1577 aa9.5□□□□□ -0.89
SCFD2-203ENST00000503450 ZNF608Q9ULD9 1512 aaPredicted RBP9.48□□□□□ -0.89
SCFD2-203ENST00000503450 IFT140Q96RY7 1462 aa9.47□□□□□ -0.89
SCFD2-203ENST00000503450 POLA1P09884 1462 aaPredicted RBP9.46□□□□□ -0.9
SCFD2-203ENST00000503450 CUX1P39880 1505 aa9.46□□□□□ -0.9
SCFD2-203ENST00000503450 ABCC8Q09428 1581 aa9.46□□□□□ -0.9
SCFD2-203ENST00000503450 TARBP1Q13395 1621 aaKnown RBP9.45□□□□□ -0.9
SCFD2-203ENST00000503450 EIF4G3O43432 1585 aaKnown RBP9.41□□□□□ -0.9
SCFD2-203ENST00000503450 FGD5Q6ZNL6 1462 aa9.41□□□□□ -0.9
SCFD2-203ENST00000503450 RAD54L2Q9Y4B4 1467 aa9.41□□□□□ -0.9
SCFD2-203ENST00000503450 AQRO60306 1485 aaKnown RBP eCLIP9.38□□□□□ -0.91
SCFD2-203ENST00000503450 WDR97A6NE52 1622 aa9.36□□□□□ -0.91
SCFD2-203ENST00000503450 SOGA1O94964 1423 aa9.36□□□□□ -0.91
SCFD2-203ENST00000503450 SYNJ1O43426 1573 aa9.35□□□□□ -0.91
SCFD2-203ENST00000503450 TDRD9Q8NDG6 1382 aaKnown RBP9.35□□□□□ -0.91
SCFD2-203ENST00000503450 BIVM-ERCC5R4GMW8 1640 aa9.33□□□□□ -0.92
SCFD2-203ENST00000503450 TOP2BQ02880 1626 aa9.32□□□□□ -0.92
SCFD2-203ENST00000503450 WRNQ14191 1432 aaPredicted RBP eCLIP9.31□□□□□ -0.92
SCFD2-203ENST00000503450 ABCA10Q8WWZ4 1543 aa9.31□□□□□ -0.92
SCFD2-203ENST00000503450 SNAPC4Q5SXM2 1469 aa9.31□□□□□ -0.92
SCFD2-203ENST00000503450 ABCA5Q8WWZ7 1642 aa9.31□□□□□ -0.92
SCFD2-203ENST00000503450 OSCARQ8IYS5 282 aa9.3□□□□□ -0.92
SCFD2-203ENST00000503450 CHD1O14646 1710 aa9.29□□□□□ -0.92
SCFD2-203ENST00000503450 GRIN2BQ13224 1484 aa9.28□□□□□ -0.92
SCFD2-203ENST00000503450 GAPVD1Q14C86 1478 aa9.27□□□□□ -0.93
SCFD2-203ENST00000503450 MAGI1Q96QZ7 1491 aaPredicted RBP9.27□□□□□ -0.93
SCFD2-203ENST00000503450 PBRM1Q86U86 1689 aa9.25□□□□□ -0.93
SCFD2-203ENST00000503450 RIMBP3CA6NJZ7 1639 aa9.24□□□□□ -0.93
SCFD2-203ENST00000503450 RIMBP3BA6NNM3 1639 aa9.24□□□□□ -0.93
SCFD2-203ENST00000503450 RIMBP3Q9UFD9 1639 aa9.24□□□□□ -0.93
SCFD2-203ENST00000503450 CLASP1Q7Z460 1538 aa9.24□□□□□ -0.93
SCFD2-203ENST00000503450 SYNJ2O15056 1496 aa9.23□□□□□ -0.93
SCFD2-203ENST00000503450 ARHGEF11O15085 1522 aa9.23□□□□□ -0.93
SCFD2-203ENST00000503450 ADAMTS12P58397 1594 aa9.22□□□□□ -0.93
SCFD2-203ENST00000503450 ARAP1Q96P48 1450 aa9.19□□□□□ -0.94
SCFD2-203ENST00000503450 FBLN2P98095 1184 aa9.18□□□□□ -0.94
SCFD2-203ENST00000503450 GRIN2AQ12879 1464 aa9.18□□□□□ -0.94
SCFD2-203ENST00000503450 ERICH3Q5RHP9 1530 aa9.18□□□□□ -0.94
SCFD2-203ENST00000503450 CEP170Q5SW79 1584 aa9.17□□□□□ -0.94
SCFD2-203ENST00000503450 NUP160Q12769 1436 aa9.17□□□□□ -0.94
SCFD2-203ENST00000503450 FHAD1B1AJZ9 1412 aa9.16□□□□□ -0.94
SCFD2-203ENST00000503450 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
SCFD2-203ENST00000503450 TRIM41Q8WV44 630 aa9.16□□□□□ -0.94
SCFD2-203ENST00000503450 ERCC6L2Q5T890 1561 aa9.13□□□□□ -0.95
SCFD2-203ENST00000503450 IGF1RP08069 1367 aa9.12□□□□□ -0.95
SCFD2-203ENST00000503450 PHF23Q9BUL5 403 aaPredicted RBP9.11□□□□□ -0.95
SCFD2-203ENST00000503450 SHROOM2Q13796 1616 aa9.11□□□□□ -0.95
SCFD2-203ENST00000503450 KIF27Q86VH2 1401 aa9.1□□□□□ -0.95
SCFD2-203ENST00000503450 RUSC2Q8N2Y8 1516 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms