RNA–Protein interactions for RNA: ENST00000503340.1

MATR3-205, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-205ENST00000503340 NISCHQ9Y2I1 1504 aa20.82■□□□□ 0.92
MATR3-205ENST00000503340 ABCC9O60706 1549 aa19.05■□□□□ 0.64
MATR3-205ENST00000503340 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
MATR3-205ENST00000503340 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
MATR3-205ENST00000503340 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
MATR3-205ENST00000503340 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
MATR3-205ENST00000503340 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.46
MATR3-205ENST00000503340 NACADO15069 1562 aa17.78■□□□□ 0.44
MATR3-205ENST00000503340 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
MATR3-205ENST00000503340 DCAF8L2P0C7V8 631 aa17.68■□□□□ 0.42
MATR3-205ENST00000503340 UNC13AQ9UPW8 1703 aa17.6■□□□□ 0.41
MATR3-205ENST00000503340 BICRAQ9NZM4 1560 aa17.52■□□□□ 0.39
MATR3-205ENST00000503340 MYO15BQ96JP2 1530 aa17.44■□□□□ 0.38
MATR3-205ENST00000503340 ZCCHC6Q5VYS8 1495 aaKnown RBP17.21■□□□□ 0.35
MATR3-205ENST00000503340 CC2D2AQ9P2K1 1620 aa17.18■□□□□ 0.34
MATR3-205ENST00000503340 CECR2Q9BXF3 1484 aa17.16■□□□□ 0.34
MATR3-205ENST00000503340 SHROOM4Q9ULL8 1493 aa17.15■□□□□ 0.34
MATR3-205ENST00000503340 DCAF1Q9Y4B6 1507 aa17.14■□□□□ 0.33
MATR3-205ENST00000503340 SCRIBQ14160 1630 aa17.13■□□□□ 0.33
MATR3-205ENST00000503340 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.32
MATR3-205ENST00000503340 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
MATR3-205ENST00000503340 CUX2O14529 1486 aa16.46■□□□□ 0.23
MATR3-205ENST00000503340 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
MATR3-205ENST00000503340 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
MATR3-205ENST00000503340 ATAD2BQ9ULI0 1458 aa16.37■□□□□ 0.21
MATR3-205ENST00000503340 NESP48681 1621 aa16.32■□□□□ 0.2
MATR3-205ENST00000503340 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
MATR3-205ENST00000503340 HMGXB3Q12766 1538 aa16.28■□□□□ 0.2
MATR3-205ENST00000503340 SMARCA2P51531 1590 aa16.27■□□□□ 0.2
MATR3-205ENST00000503340 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
MATR3-205ENST00000503340 BAZ1BQ9UIG0 1483 aaKnown RBP16.18■□□□□ 0.18
MATR3-205ENST00000503340 THOC2Q8NI27 1593 aaKnown RBP16.17■□□□□ 0.18
MATR3-205ENST00000503340 BAZ1AQ9NRL2 1556 aaPredicted RBP16.14■□□□□ 0.17
MATR3-205ENST00000503340 PEG3Q9GZU2 1588 aa16.12■□□□□ 0.17
MATR3-205ENST00000503340 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
MATR3-205ENST00000503340 MROH2BQ7Z745 1585 aa16.08■□□□□ 0.16
MATR3-205ENST00000503340 KIF21AQ7Z4S6 1674 aa16.06■□□□□ 0.16
MATR3-205ENST00000503340 PDS5BQ9NTI5 1447 aa15.99■□□□□ 0.15
MATR3-205ENST00000503340 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
MATR3-205ENST00000503340 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
MATR3-205ENST00000503340 MRC2Q9UBG0 1479 aa15.9■□□□□ 0.14
MATR3-205ENST00000503340 WDR62O43379 1518 aa15.88■□□□□ 0.13
MATR3-205ENST00000503340 WIZO95785 1651 aa15.86■□□□□ 0.13
MATR3-205ENST00000503340 SENP3Q9H4L4 574 aaPredicted RBP15.79■□□□□ 0.12
MATR3-205ENST00000503340 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
MATR3-205ENST00000503340 FANCD2Q9BXW9 1451 aa15.76■□□□□ 0.11
MATR3-205ENST00000503340 CFTRP13569 1480 aa15.71■□□□□ 0.1
MATR3-205ENST00000503340 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
MATR3-205ENST00000503340 URB2Q14146 1524 aaKnown RBP15.67■□□□□ 0.1
MATR3-205ENST00000503340 RSF1Q96T23 1441 aaPredicted RBP15.64■□□□□ 0.09
MATR3-205ENST00000503340 TOP2AP11388 1531 aaKnown RBP15.62■□□□□ 0.09
MATR3-205ENST00000503340 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
MATR3-205ENST00000503340 RIMBP3CA6NJZ7 1639 aa15.54■□□□□ 0.08
MATR3-205ENST00000503340 RIMBP3BA6NNM3 1639 aa15.54■□□□□ 0.08
MATR3-205ENST00000503340 RIMBP3Q9UFD9 1639 aa15.54■□□□□ 0.08
MATR3-205ENST00000503340 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
MATR3-205ENST00000503340 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
MATR3-205ENST00000503340 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
MATR3-205ENST00000503340 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
MATR3-205ENST00000503340 ARHGEF11O15085 1522 aa15.45■□□□□ 0.06
MATR3-205ENST00000503340 TOPBP1Q92547 1522 aa15.44■□□□□ 0.06
MATR3-205ENST00000503340 EIF4G3O43432 1585 aaKnown RBP15.41■□□□□ 0.06
MATR3-205ENST00000503340 AQRO60306 1485 aaKnown RBP eCLIP15.35■□□□□ 0.05
MATR3-205ENST00000503340 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
MATR3-205ENST00000503340 DNMBPQ6XZF7 1577 aa15.34■□□□□ 0.05
MATR3-205ENST00000503340 CHD1O14646 1710 aa15.33■□□□□ 0.04
MATR3-205ENST00000503340 TARBP1Q13395 1621 aaKnown RBP15.32■□□□□ 0.04
MATR3-205ENST00000503340 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
MATR3-205ENST00000503340 ARAP1Q96P48 1450 aa15.31■□□□□ 0.04
MATR3-205ENST00000503340 POLA1P09884 1462 aaPredicted RBP15.27■□□□□ 0.03
MATR3-205ENST00000503340 FBLN2P98095 1184 aa15.26■□□□□ 0.03
MATR3-205ENST00000503340 RAD54L2Q9Y4B4 1467 aa15.25■□□□□ 0.03
MATR3-205ENST00000503340 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
MATR3-205ENST00000503340 TDRD9Q8NDG6 1382 aaKnown RBP15.22■□□□□ 0.03
MATR3-205ENST00000503340 SOGA1O94964 1423 aa15.18■□□□□ 0.02
MATR3-205ENST00000503340 SNAPC4Q5SXM2 1469 aa15.18■□□□□ 0.02
MATR3-205ENST00000503340 CLASP1Q7Z460 1538 aa15.16■□□□□ 0.02
MATR3-205ENST00000503340 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
MATR3-205ENST00000503340 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
MATR3-205ENST00000503340 CUX1P39880 1505 aa15.11■□□□□ 0.01
MATR3-205ENST00000503340 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
MATR3-205ENST00000503340 SYNJ1O43426 1573 aa15.08■□□□□ 0
MATR3-205ENST00000503340 WDR97A6NE52 1622 aa15.08■□□□□ 0
MATR3-205ENST00000503340 MAGI1Q96QZ7 1491 aaPredicted RBP15.08■□□□□ 0
MATR3-205ENST00000503340 GRIN2BQ13224 1484 aa15.06■□□□□ 0
MATR3-205ENST00000503340 SYNJ2O15056 1496 aa15.05■□□□□ -0
MATR3-205ENST00000503340 PBRM1Q86U86 1689 aa15□□□□□ -0.01
MATR3-205ENST00000503340 GAPVD1Q14C86 1478 aa15□□□□□ -0.01
MATR3-205ENST00000503340 ERCC6L2Q5T890 1561 aa14.96□□□□□ -0.01
MATR3-205ENST00000503340 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
MATR3-205ENST00000503340 ABCA10Q8WWZ4 1543 aa14.94□□□□□ -0.02
MATR3-205ENST00000503340 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
MATR3-205ENST00000503340 CEP170Q5SW79 1584 aa14.88□□□□□ -0.03
MATR3-205ENST00000503340 ADAMTS12P58397 1594 aa14.85□□□□□ -0.03
MATR3-205ENST00000503340 NUP160Q12769 1436 aa14.85□□□□□ -0.03
MATR3-205ENST00000503340 SHROOM2Q13796 1616 aa14.81□□□□□ -0.04
MATR3-205ENST00000503340 WRNQ14191 1432 aaPredicted RBP eCLIP14.81□□□□□ -0.04
MATR3-205ENST00000503340 FHAD1B1AJZ9 1412 aa14.78□□□□□ -0.04
MATR3-205ENST00000503340 TOP2BQ02880 1626 aa14.77□□□□□ -0.05
MATR3-205ENST00000503340 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms