RNA–Protein interactions for RNA: ENST00000502604.5

CDK7-202, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-202ENST00000502604 NISCHQ9Y2I1 1504 aa29.53■■■□□ 2.32
CDK7-202ENST00000502604 CCDC180Q9P1Z9 1646 aa26.46■■□□□ 1.83
CDK7-202ENST00000502604 ABCC9O60706 1549 aa26.26■■□□□ 1.79
CDK7-202ENST00000502604 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
CDK7-202ENST00000502604 RB1CC1Q8TDY2 1594 aa25.07■■□□□ 1.6
CDK7-202ENST00000502604 NACADO15069 1562 aa24.93■■□□□ 1.58
CDK7-202ENST00000502604 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
CDK7-202ENST00000502604 DCAF8L2P0C7V8 631 aa24.8■■□□□ 1.56
CDK7-202ENST00000502604 UNC13AQ9UPW8 1703 aa24.63■■□□□ 1.53
CDK7-202ENST00000502604 MYO15BQ96JP2 1530 aa24.62■■□□□ 1.53
CDK7-202ENST00000502604 ZCCHC6Q5VYS8 1495 aaKnown RBP24.52■■□□□ 1.52
CDK7-202ENST00000502604 DNAJC5BQ9UF47 199 aa24.46■■□□□ 1.51
CDK7-202ENST00000502604 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.51
CDK7-202ENST00000502604 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
CDK7-202ENST00000502604 BICRAQ9NZM4 1560 aa24.38■■□□□ 1.49
CDK7-202ENST00000502604 SCRIBQ14160 1630 aa24.14■■□□□ 1.46
CDK7-202ENST00000502604 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
CDK7-202ENST00000502604 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.39
CDK7-202ENST00000502604 EIF4G1Q04637 1599 aaKnown RBP23.74■■□□□ 1.39
CDK7-202ENST00000502604 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
CDK7-202ENST00000502604 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
CDK7-202ENST00000502604 NCAPD3P42695 1498 aa22.99■■□□□ 1.27
CDK7-202ENST00000502604 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
CDK7-202ENST00000502604 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
CDK7-202ENST00000502604 BAZ1AQ9NRL2 1556 aaPredicted RBP22.9■■□□□ 1.26
CDK7-202ENST00000502604 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
CDK7-202ENST00000502604 PEG3Q9GZU2 1588 aa22.78■■□□□ 1.24
CDK7-202ENST00000502604 MROH2BQ7Z745 1585 aa22.78■■□□□ 1.24
CDK7-202ENST00000502604 BAZ1BQ9UIG0 1483 aaKnown RBP22.76■■□□□ 1.23
CDK7-202ENST00000502604 ERCC6Q03468 1493 aa22.65■■□□□ 1.22
CDK7-202ENST00000502604 NESP48681 1621 aa22.63■■□□□ 1.21
CDK7-202ENST00000502604 WIZO95785 1651 aa22.55■■□□□ 1.2
CDK7-202ENST00000502604 CUX2O14529 1486 aa22.54■■□□□ 1.2
CDK7-202ENST00000502604 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
CDK7-202ENST00000502604 KIF21AQ7Z4S6 1674 aa22.4■■□□□ 1.18
CDK7-202ENST00000502604 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
CDK7-202ENST00000502604 RSF1Q96T23 1441 aaPredicted RBP22.34■■□□□ 1.17
CDK7-202ENST00000502604 PDS5BQ9NTI5 1447 aa22.3■■□□□ 1.16
CDK7-202ENST00000502604 CADPSQ9ULU8 1353 aa22.29■■□□□ 1.16
CDK7-202ENST00000502604 DNAJC5Q9H3Z4 198 aa22.28■■□□□ 1.16
CDK7-202ENST00000502604 TOP2AP11388 1531 aaKnown RBP22.24■■□□□ 1.15
CDK7-202ENST00000502604 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
CDK7-202ENST00000502604 CFTRP13569 1480 aa22.09■■□□□ 1.13
CDK7-202ENST00000502604 WDR62O43379 1518 aa22.09■■□□□ 1.13
CDK7-202ENST00000502604 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
CDK7-202ENST00000502604 FANCD2Q9BXW9 1451 aa22.07■■□□□ 1.12
CDK7-202ENST00000502604 PRDM2Q13029 1718 aa22.01■■□□□ 1.11
CDK7-202ENST00000502604 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
CDK7-202ENST00000502604 URB2Q14146 1524 aaKnown RBP21.9■■□□□ 1.1
CDK7-202ENST00000502604 SENP3Q9H4L4 574 aaPredicted RBP21.88■■□□□ 1.09
CDK7-202ENST00000502604 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
CDK7-202ENST00000502604 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
CDK7-202ENST00000502604 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
CDK7-202ENST00000502604 IFT140Q96RY7 1462 aa21.61■■□□□ 1.05
CDK7-202ENST00000502604 ZNF608Q9ULD9 1512 aaPredicted RBP21.61■■□□□ 1.05
CDK7-202ENST00000502604 ABCC8Q09428 1581 aa21.6■■□□□ 1.05
CDK7-202ENST00000502604 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
CDK7-202ENST00000502604 TARBP1Q13395 1621 aaKnown RBP21.51■■□□□ 1.03
CDK7-202ENST00000502604 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
CDK7-202ENST00000502604 POLA1P09884 1462 aaPredicted RBP21.48■■□□□ 1.03
CDK7-202ENST00000502604 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
CDK7-202ENST00000502604 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
CDK7-202ENST00000502604 AQRO60306 1485 aaKnown RBP eCLIP21.41■■□□□ 1.027e-6■■□□□ 12.2
CDK7-202ENST00000502604 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
CDK7-202ENST00000502604 CUX1P39880 1505 aa21.4■■□□□ 1.02
CDK7-202ENST00000502604 CHD1O14646 1710 aa21.37■■□□□ 1.01
CDK7-202ENST00000502604 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
CDK7-202ENST00000502604 SOGA1O94964 1423 aa21.35■■□□□ 1.01
CDK7-202ENST00000502604 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
CDK7-202ENST00000502604 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
CDK7-202ENST00000502604 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
CDK7-202ENST00000502604 TDRD9Q8NDG6 1382 aaKnown RBP21.29■■□□□ 1
CDK7-202ENST00000502604 WDR97A6NE52 1622 aa21.28■■□□□ 1
CDK7-202ENST00000502604 ARHGEF11O15085 1522 aa21.23■□□□□ 0.99
CDK7-202ENST00000502604 SNAPC4Q5SXM2 1469 aa21.21■□□□□ 0.99
CDK7-202ENST00000502604 FBLN2P98095 1184 aa21.2■□□□□ 0.98
CDK7-202ENST00000502604 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
CDK7-202ENST00000502604 GRIN2BQ13224 1484 aa21.15■□□□□ 0.98
CDK7-202ENST00000502604 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
CDK7-202ENST00000502604 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
CDK7-202ENST00000502604 BIVM-ERCC5R4GMW8 1640 aa21.12■□□□□ 0.97
CDK7-202ENST00000502604 ABCA10Q8WWZ4 1543 aa21.12■□□□□ 0.97
CDK7-202ENST00000502604 GAPVD1Q14C86 1478 aa21.11■□□□□ 0.97
CDK7-202ENST00000502604 SYNJ1O43426 1573 aa21.1■□□□□ 0.97
CDK7-202ENST00000502604 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
CDK7-202ENST00000502604 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
CDK7-202ENST00000502604 CLASP1Q7Z460 1538 aa21.07■□□□□ 0.96
CDK7-202ENST00000502604 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
CDK7-202ENST00000502604 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
CDK7-202ENST00000502604 ARAP1Q96P48 1450 aa21.03■□□□□ 0.96
CDK7-202ENST00000502604 CYB5RLQ6IPT4 315 aa21.01■□□□□ 0.95
CDK7-202ENST00000502604 ADAMTS12P58397 1594 aa20.95■□□□□ 0.94
CDK7-202ENST00000502604 GRIN2AQ12879 1464 aa20.9■□□□□ 0.94
CDK7-202ENST00000502604 ERICH3Q5RHP9 1530 aa20.86■□□□□ 0.93
CDK7-202ENST00000502604 CEP170Q5SW79 1584 aa20.85■□□□□ 0.93
CDK7-202ENST00000502604 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.92
CDK7-202ENST00000502604 NUP160Q12769 1436 aa20.81■□□□□ 0.92
CDK7-202ENST00000502604 ERCC6L2Q5T890 1561 aa20.78■□□□□ 0.92
CDK7-202ENST00000502604 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
CDK7-202ENST00000502604 TRHP20396 242 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms