RNA–Protein interactions for RNA: ENST00000498194.1

PCK1-206, Transcript of phosphoenolpyruvate carboxykinase 1, humanhuman

TSL 2

Gene PCK1, Length 783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1-206ENST00000498194 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.1
PCK1-206ENST00000498194 CCDC180Q9P1Z9 1646 aa25.18■■□□□ 1.62
PCK1-206ENST00000498194 ABCC9O60706 1549 aa25.14■■□□□ 1.62
PCK1-206ENST00000498194 RB1CC1Q8TDY2 1594 aa23.91■■□□□ 1.42
PCK1-206ENST00000498194 NACADO15069 1562 aa23.79■■□□□ 1.4
PCK1-206ENST00000498194 DNAJC5BQ9UF47 199 aa23.62■■□□□ 1.37
PCK1-206ENST00000498194 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
PCK1-206ENST00000498194 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
PCK1-206ENST00000498194 PABPN1Q86U42 306 aaKnown RBP eCLIP23.41■■□□□ 1.34
PCK1-206ENST00000498194 UNC13AQ9UPW8 1703 aa23.41■■□□□ 1.34
PCK1-206ENST00000498194 ZCCHC6Q5VYS8 1495 aaKnown RBP23.37■■□□□ 1.33
PCK1-206ENST00000498194 BICRAQ9NZM4 1560 aa23.33■■□□□ 1.33
PCK1-206ENST00000498194 DCAF1Q9Y4B6 1507 aa23.27■■□□□ 1.32
PCK1-206ENST00000498194 SCRIBQ14160 1630 aa22.95■■□□□ 1.26
PCK1-206ENST00000498194 SHROOM4Q9ULL8 1493 aa22.95■■□□□ 1.26
PCK1-206ENST00000498194 AEBP2Q6ZN18 517 aaPredicted RBP22.93■■□□□ 1.26
PCK1-206ENST00000498194 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
PCK1-206ENST00000498194 CC2D2AQ9P2K1 1620 aa22.71■■□□□ 1.23
PCK1-206ENST00000498194 EIF4G1Q04637 1599 aaKnown RBP22.7■■□□□ 1.22
PCK1-206ENST00000498194 CECR2Q9BXF3 1484 aa22.63■■□□□ 1.21
PCK1-206ENST00000498194 NCAPD3P42695 1498 aa22.02■■□□□ 1.12
PCK1-206ENST00000498194 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
PCK1-206ENST00000498194 SMARCA4P51532 1647 aa21.92■■□□□ 1.1
PCK1-206ENST00000498194 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
PCK1-206ENST00000498194 SMARCA2P51531 1590 aa21.83■■□□□ 1.09
PCK1-206ENST00000498194 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
PCK1-206ENST00000498194 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
PCK1-206ENST00000498194 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
PCK1-206ENST00000498194 BAZ1BQ9UIG0 1483 aaKnown RBP21.69■■□□□ 1.06
PCK1-206ENST00000498194 NESP48681 1621 aa21.66■■□□□ 1.06
PCK1-206ENST00000498194 CUX2O14529 1486 aa21.63■■□□□ 1.05
PCK1-206ENST00000498194 ERCC6Q03468 1493 aa21.62■■□□□ 1.05
PCK1-206ENST00000498194 DNAJC5Q9H3Z4 198 aa21.56■■□□□ 1.04
PCK1-206ENST00000498194 LAMC3Q9Y6N6 1575 aa21.45■■□□□ 1.02
PCK1-206ENST00000498194 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
PCK1-206ENST00000498194 WIZO95785 1651 aa21.41■■□□□ 1.02
PCK1-206ENST00000498194 KIF21AQ7Z4S6 1674 aa21.32■■□□□ 1
PCK1-206ENST00000498194 CADPSQ9ULU8 1353 aa21.32■■□□□ 1
PCK1-206ENST00000498194 PDS5BQ9NTI5 1447 aa21.3■■□□□ 1
PCK1-206ENST00000498194 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
PCK1-206ENST00000498194 TOP2AP11388 1531 aaKnown RBP21.15■□□□□ 0.98
PCK1-206ENST00000498194 MRC2Q9UBG0 1479 aa21.15■□□□□ 0.98
PCK1-206ENST00000498194 WDR62O43379 1518 aa21.14■□□□□ 0.97
PCK1-206ENST00000498194 CFTRP13569 1480 aa21.13■□□□□ 0.97
PCK1-206ENST00000498194 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
PCK1-206ENST00000498194 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
PCK1-206ENST00000498194 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
PCK1-206ENST00000498194 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
PCK1-206ENST00000498194 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
PCK1-206ENST00000498194 TOPBP1Q92547 1522 aa20.69■□□□□ 0.9
PCK1-206ENST00000498194 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
PCK1-206ENST00000498194 IFT140Q96RY7 1462 aa20.65■□□□□ 0.9
PCK1-206ENST00000498194 DNMBPQ6XZF7 1577 aa20.6■□□□□ 0.89
PCK1-206ENST00000498194 OSCARQ8IYS5 282 aa20.6■□□□□ 0.89
PCK1-206ENST00000498194 ABCC8Q09428 1581 aa20.58■□□□□ 0.88
PCK1-206ENST00000498194 TRIM41Q8WV44 630 aa20.55■□□□□ 0.88
PCK1-206ENST00000498194 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
PCK1-206ENST00000498194 EIF4G3O43432 1585 aaKnown RBP20.52■□□□□ 0.88
PCK1-206ENST00000498194 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
PCK1-206ENST00000498194 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.875e-8■■■■■ 44.7
PCK1-206ENST00000498194 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
PCK1-206ENST00000498194 CUX1P39880 1505 aa20.38■□□□□ 0.85
PCK1-206ENST00000498194 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
PCK1-206ENST00000498194 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
PCK1-206ENST00000498194 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
PCK1-206ENST00000498194 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
PCK1-206ENST00000498194 SOGA1O94964 1423 aa20.36■□□□□ 0.85
PCK1-206ENST00000498194 ARHGEF11O15085 1522 aa20.34■□□□□ 0.85
PCK1-206ENST00000498194 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
PCK1-206ENST00000498194 CHD1O14646 1710 aa20.31■□□□□ 0.84
PCK1-206ENST00000498194 SUPT5HO00267 1087 aaKnown RBP20.27■□□□□ 0.84
PCK1-206ENST00000498194 WDR97A6NE52 1622 aa20.26■□□□□ 0.83
PCK1-206ENST00000498194 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
PCK1-206ENST00000498194 FBLN2P98095 1184 aa20.19■□□□□ 0.82
PCK1-206ENST00000498194 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
PCK1-206ENST00000498194 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
PCK1-206ENST00000498194 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
PCK1-206ENST00000498194 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
PCK1-206ENST00000498194 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
PCK1-206ENST00000498194 ABCA10Q8WWZ4 1543 aa20.15■□□□□ 0.82
PCK1-206ENST00000498194 CYB5RLQ6IPT4 315 aa20.12■□□□□ 0.81
PCK1-206ENST00000498194 ABCA5Q8WWZ7 1642 aa20.12■□□□□ 0.81
PCK1-206ENST00000498194 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
PCK1-206ENST00000498194 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
PCK1-206ENST00000498194 PBRM1Q86U86 1689 aa20.08■□□□□ 0.81
PCK1-206ENST00000498194 CHMP7Q8WUX9 453 aaPredicted RBP20.08■□□□□ 0.81
PCK1-206ENST00000498194 SYNJ1O43426 1573 aa20.06■□□□□ 0.8
PCK1-206ENST00000498194 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
PCK1-206ENST00000498194 BIVM-ERCC5R4GMW8 1640 aa20.04■□□□□ 0.8
PCK1-206ENST00000498194 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.8
PCK1-206ENST00000498194 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
PCK1-206ENST00000498194 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
PCK1-206ENST00000498194 NUP160Q12769 1436 aa19.92■□□□□ 0.78
PCK1-206ENST00000498194 CEP170Q5SW79 1584 aa19.89■□□□□ 0.77
PCK1-206ENST00000498194 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
PCK1-206ENST00000498194 ERICH3Q5RHP9 1530 aa19.87■□□□□ 0.77
PCK1-206ENST00000498194 FHAD1B1AJZ9 1412 aa19.87■□□□□ 0.77
PCK1-206ENST00000498194 TRHP20396 242 aaPredicted RBP19.81■□□□□ 0.76
PCK1-206ENST00000498194 SHROOM2Q13796 1616 aa19.8■□□□□ 0.76
PCK1-206ENST00000498194 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms