RNA–Protein interactions for RNA: ENST00000496536.1

GMPPA-212, Transcript of GDP-mannose pyrophosphorylase A, humanhuman

TSL 5

Gene GMPPA, Length 302 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMPPA-212ENST00000496536 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.38
GMPPA-212ENST00000496536 ABCC9O60706 1549 aa22.32■■□□□ 1.16
GMPPA-212ENST00000496536 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
GMPPA-212ENST00000496536 CCDC180Q9P1Z9 1646 aa21.46■■□□□ 1.03
GMPPA-212ENST00000496536 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
GMPPA-212ENST00000496536 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
GMPPA-212ENST00000496536 NACADO15069 1562 aa20.52■□□□□ 0.88
GMPPA-212ENST00000496536 DCAF8L2P0C7V8 631 aa20.5■□□□□ 0.87
GMPPA-212ENST00000496536 DNAJC5Q9H3Z4 198 aa20.42■□□□□ 0.86
GMPPA-212ENST00000496536 UNC13AQ9UPW8 1703 aa20.36■□□□□ 0.85
GMPPA-212ENST00000496536 BICRAQ9NZM4 1560 aa20.26■□□□□ 0.83
GMPPA-212ENST00000496536 CECR2Q9BXF3 1484 aa20.17■□□□□ 0.82
GMPPA-212ENST00000496536 CC2D2AQ9P2K1 1620 aa20.08■□□□□ 0.8
GMPPA-212ENST00000496536 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
GMPPA-212ENST00000496536 SHROOM4Q9ULL8 1493 aa19.85■□□□□ 0.77
GMPPA-212ENST00000496536 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.77
GMPPA-212ENST00000496536 SCRIBQ14160 1630 aa19.59■□□□□ 0.73
GMPPA-212ENST00000496536 CUX2O14529 1486 aa19.48■□□□□ 0.71
GMPPA-212ENST00000496536 DCAF1Q9Y4B6 1507 aa19.43■□□□□ 0.7
GMPPA-212ENST00000496536 ZCCHC6Q5VYS8 1495 aaKnown RBP19.4■□□□□ 0.7
GMPPA-212ENST00000496536 ERCC6Q03468 1493 aa19.33■□□□□ 0.68
GMPPA-212ENST00000496536 TRIM41Q8WV44 630 aa19.28■□□□□ 0.68
GMPPA-212ENST00000496536 NCAPD3P42695 1498 aa18.98■□□□□ 0.63
GMPPA-212ENST00000496536 NESP48681 1621 aa18.96■□□□□ 0.63
GMPPA-212ENST00000496536 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.6
GMPPA-212ENST00000496536 THOC2Q8NI27 1593 aaKnown RBP18.82■□□□□ 0.6
GMPPA-212ENST00000496536 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
GMPPA-212ENST00000496536 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
GMPPA-212ENST00000496536 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
GMPPA-212ENST00000496536 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
GMPPA-212ENST00000496536 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
GMPPA-212ENST00000496536 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
GMPPA-212ENST00000496536 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
GMPPA-212ENST00000496536 SMARCA4P51532 1647 aa18.59■□□□□ 0.57
GMPPA-212ENST00000496536 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
GMPPA-212ENST00000496536 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
GMPPA-212ENST00000496536 WDR62O43379 1518 aa18.41■□□□□ 0.54
GMPPA-212ENST00000496536 CADPSQ9ULU8 1353 aa18.41■□□□□ 0.54
GMPPA-212ENST00000496536 PEG3Q9GZU2 1588 aa18.37■□□□□ 0.53
GMPPA-212ENST00000496536 RIMBP3CA6NJZ7 1639 aa18.32■□□□□ 0.52
GMPPA-212ENST00000496536 RIMBP3BA6NNM3 1639 aa18.32■□□□□ 0.52
GMPPA-212ENST00000496536 RIMBP3Q9UFD9 1639 aa18.32■□□□□ 0.52
GMPPA-212ENST00000496536 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
GMPPA-212ENST00000496536 TRHP20396 242 aaPredicted RBP18.29■□□□□ 0.52
GMPPA-212ENST00000496536 CEP164Q9UPV0 1460 aa18.26■□□□□ 0.51
GMPPA-212ENST00000496536 CYB5RLQ6IPT4 315 aa18.24■□□□□ 0.51
GMPPA-212ENST00000496536 MROH2BQ7Z745 1585 aa18.23■□□□□ 0.51
GMPPA-212ENST00000496536 ARHGEF11O15085 1522 aa18.19■□□□□ 0.5
GMPPA-212ENST00000496536 FANCD2Q9BXW9 1451 aa18.18■□□□□ 0.5
GMPPA-212ENST00000496536 SUPT5HO00267 1087 aaKnown RBP18.15■□□□□ 0.5
GMPPA-212ENST00000496536 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
GMPPA-212ENST00000496536 CFTRP13569 1480 aa18■□□□□ 0.47
GMPPA-212ENST00000496536 ZNF608Q9ULD9 1512 aaPredicted RBP17.98■□□□□ 0.47
GMPPA-212ENST00000496536 WIZO95785 1651 aa17.97■□□□□ 0.47
GMPPA-212ENST00000496536 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
GMPPA-212ENST00000496536 IFT140Q96RY7 1462 aa17.92■□□□□ 0.46
GMPPA-212ENST00000496536 FBLN2P98095 1184 aa17.88■□□□□ 0.45
GMPPA-212ENST00000496536 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
GMPPA-212ENST00000496536 CHD1O14646 1710 aa17.81■□□□□ 0.44
GMPPA-212ENST00000496536 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
GMPPA-212ENST00000496536 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.432e-8■□□□□ 8.5
GMPPA-212ENST00000496536 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
GMPPA-212ENST00000496536 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
GMPPA-212ENST00000496536 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
GMPPA-212ENST00000496536 TOP2AP11388 1531 aaKnown RBP17.66■□□□□ 0.42
GMPPA-212ENST00000496536 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
GMPPA-212ENST00000496536 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
GMPPA-212ENST00000496536 ILDR1Q86SU0 546 aaPredicted RBP17.6■□□□□ 0.41
GMPPA-212ENST00000496536 CHMP7Q8WUX9 453 aaPredicted RBP17.6■□□□□ 0.41
GMPPA-212ENST00000496536 DNMBPQ6XZF7 1577 aa17.58■□□□□ 0.41
GMPPA-212ENST00000496536 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
GMPPA-212ENST00000496536 TDRD9Q8NDG6 1382 aaKnown RBP17.56■□□□□ 0.4
GMPPA-212ENST00000496536 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
GMPPA-212ENST00000496536 SYNJ1O43426 1573 aa17.52■□□□□ 0.39
GMPPA-212ENST00000496536 SNAPC4Q5SXM2 1469 aa17.51■□□□□ 0.39
GMPPA-212ENST00000496536 POLA1P09884 1462 aaPredicted RBP17.5■□□□□ 0.39
GMPPA-212ENST00000496536 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
GMPPA-212ENST00000496536 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
GMPPA-212ENST00000496536 SOGA1O94964 1423 aa17.47■□□□□ 0.39
GMPPA-212ENST00000496536 MAGI1Q96QZ7 1491 aaPredicted RBP17.41■□□□□ 0.38
GMPPA-212ENST00000496536 SYNJ2O15056 1496 aa17.38■□□□□ 0.37
GMPPA-212ENST00000496536 GRIN2BQ13224 1484 aa17.37■□□□□ 0.37
GMPPA-212ENST00000496536 KDM4FA0A1W2PPD8 638 aa17.34■□□□□ 0.37
GMPPA-212ENST00000496536 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
GMPPA-212ENST00000496536 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
GMPPA-212ENST00000496536 ERCC6L2Q5T890 1561 aa17.29■□□□□ 0.36
GMPPA-212ENST00000496536 KIF13AQ9H1H9 1805 aa17.28■□□□□ 0.36
GMPPA-212ENST00000496536 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
GMPPA-212ENST00000496536 PBRM1Q86U86 1689 aa17.19■□□□□ 0.34
GMPPA-212ENST00000496536 CEP170Q5SW79 1584 aa17.18■□□□□ 0.34
GMPPA-212ENST00000496536 CUX1P39880 1505 aa17.16■□□□□ 0.34
GMPPA-212ENST00000496536 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
GMPPA-212ENST00000496536 GRIN2AQ12879 1464 aa17.12■□□□□ 0.33
GMPPA-212ENST00000496536 ABCC10Q5T3U5 1492 aa17.12■□□□□ 0.33
GMPPA-212ENST00000496536 NUP160Q12769 1436 aa17.09■□□□□ 0.33
GMPPA-212ENST00000496536 KDM6BO15054 1643 aa17.09■□□□□ 0.33
GMPPA-212ENST00000496536 SHROOM2Q13796 1616 aa17.05■□□□□ 0.32
GMPPA-212ENST00000496536 PRG4Q92954 1404 aaPredicted RBP17.04■□□□□ 0.32
GMPPA-212ENST00000496536 ABCA5Q8WWZ7 1642 aa17.04■□□□□ 0.32
GMPPA-212ENST00000496536 ABCA10Q8WWZ4 1543 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms