RNA–Protein interactions for RNA: ENST00000495044.5

CCDC30-211, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 2,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-211ENST00000495044 NISCHQ9Y2I1 1504 aa18.7■□□□□ 0.58
CCDC30-211ENST00000495044 ABCC9O60706 1549 aa17.15■□□□□ 0.34
CCDC30-211ENST00000495044 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.31
CCDC30-211ENST00000495044 AEBP2Q6ZN18 517 aaPredicted RBP16.35■□□□□ 0.21
CCDC30-211ENST00000495044 RB1CC1Q8TDY2 1594 aa16.25■□□□□ 0.19
CCDC30-211ENST00000495044 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.19
CCDC30-211ENST00000495044 NACADO15069 1562 aa16.06■□□□□ 0.16
CCDC30-211ENST00000495044 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
CCDC30-211ENST00000495044 UNC13AQ9UPW8 1703 aa15.89■□□□□ 0.13
CCDC30-211ENST00000495044 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
CCDC30-211ENST00000495044 BICRAQ9NZM4 1560 aa15.73■□□□□ 0.11
CCDC30-211ENST00000495044 MYO15BQ96JP2 1530 aa15.72■□□□□ 0.11
CCDC30-211ENST00000495044 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
CCDC30-211ENST00000495044 CC2D2AQ9P2K1 1620 aa15.5■□□□□ 0.07
CCDC30-211ENST00000495044 CECR2Q9BXF3 1484 aa15.48■□□□□ 0.07
CCDC30-211ENST00000495044 ZCCHC6Q5VYS8 1495 aaKnown RBP15.46■□□□□ 0.06
CCDC30-211ENST00000495044 DCAF1Q9Y4B6 1507 aa15.43■□□□□ 0.06
CCDC30-211ENST00000495044 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
CCDC30-211ENST00000495044 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
CCDC30-211ENST00000495044 CHIC1Q5VXU3 224 aa15.25■□□□□ 0.03
CCDC30-211ENST00000495044 DNAJC5Q9H3Z4 198 aa15.1■□□□□ 0.01
CCDC30-211ENST00000495044 CUX2O14529 1486 aa14.9□□□□□ -0.02
CCDC30-211ENST00000495044 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
CCDC30-211ENST00000495044 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
CCDC30-211ENST00000495044 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.05
CCDC30-211ENST00000495044 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
CCDC30-211ENST00000495044 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
CCDC30-211ENST00000495044 SMARCA4P51532 1647 aa14.68□□□□□ -0.06
CCDC30-211ENST00000495044 NESP48681 1621 aa14.65□□□□□ -0.06
CCDC30-211ENST00000495044 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
CCDC30-211ENST00000495044 THOC2Q8NI27 1593 aaKnown RBP14.59□□□□□ -0.07
CCDC30-211ENST00000495044 BAZ1AQ9NRL2 1556 aaPredicted RBP14.57□□□□□ -0.08
CCDC30-211ENST00000495044 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
CCDC30-211ENST00000495044 KIF21AQ7Z4S6 1674 aa14.51□□□□□ -0.09
CCDC30-211ENST00000495044 PEG3Q9GZU2 1588 aa14.51□□□□□ -0.09
CCDC30-211ENST00000495044 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
CCDC30-211ENST00000495044 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
CCDC30-211ENST00000495044 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
CCDC30-211ENST00000495044 MRC2Q9UBG0 1479 aa14.35□□□□□ -0.11
CCDC30-211ENST00000495044 CADPSQ9ULU8 1353 aa14.33□□□□□ -0.12
CCDC30-211ENST00000495044 WDR62O43379 1518 aa14.32□□□□□ -0.12
CCDC30-211ENST00000495044 CEP164Q9UPV0 1460 aa14.25□□□□□ -0.13
CCDC30-211ENST00000495044 WIZO95785 1651 aa14.25□□□□□ -0.13
CCDC30-211ENST00000495044 FANCD2Q9BXW9 1451 aa14.19□□□□□ -0.14
CCDC30-211ENST00000495044 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
CCDC30-211ENST00000495044 CFTRP13569 1480 aa14.12□□□□□ -0.15
CCDC30-211ENST00000495044 URB2Q14146 1524 aaKnown RBP14.08□□□□□ -0.16
CCDC30-211ENST00000495044 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
CCDC30-211ENST00000495044 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
CCDC30-211ENST00000495044 RIMBP3CA6NJZ7 1639 aa14.03□□□□□ -0.16
CCDC30-211ENST00000495044 RIMBP3BA6NNM3 1639 aa14.03□□□□□ -0.16
CCDC30-211ENST00000495044 RIMBP3Q9UFD9 1639 aa14.03□□□□□ -0.16
CCDC30-211ENST00000495044 SENP3Q9H4L4 574 aaPredicted RBP14.03□□□□□ -0.16
CCDC30-211ENST00000495044 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
CCDC30-211ENST00000495044 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
CCDC30-211ENST00000495044 ARHGEF11O15085 1522 aa13.94□□□□□ -0.18
CCDC30-211ENST00000495044 ZNF608Q9ULD9 1512 aaPredicted RBP13.94□□□□□ -0.18
CCDC30-211ENST00000495044 EIF4G3O43432 1585 aaKnown RBP13.91□□□□□ -0.18
CCDC30-211ENST00000495044 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
CCDC30-211ENST00000495044 CHD1O14646 1710 aa13.87□□□□□ -0.19
CCDC30-211ENST00000495044 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
CCDC30-211ENST00000495044 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
CCDC30-211ENST00000495044 DNMBPQ6XZF7 1577 aa13.85□□□□□ -0.19
CCDC30-211ENST00000495044 CYB5RLQ6IPT4 315 aa13.83□□□□□ -0.2
CCDC30-211ENST00000495044 TRHP20396 242 aaPredicted RBP13.8□□□□□ -0.2
CCDC30-211ENST00000495044 TARBP1Q13395 1621 aaKnown RBP13.79□□□□□ -0.2
CCDC30-211ENST00000495044 AQRO60306 1485 aaKnown RBP eCLIP13.78□□□□□ -0.2
CCDC30-211ENST00000495044 ARAP1Q96P48 1450 aa13.78□□□□□ -0.2
CCDC30-211ENST00000495044 PHF23Q9BUL5 403 aaPredicted RBP13.78□□□□□ -0.2
CCDC30-211ENST00000495044 FBLN2P98095 1184 aa13.77□□□□□ -0.21
CCDC30-211ENST00000495044 POLA1P09884 1462 aaPredicted RBP13.73□□□□□ -0.21
CCDC30-211ENST00000495044 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
CCDC30-211ENST00000495044 WDR97A6NE52 1622 aa13.67□□□□□ -0.22
CCDC30-211ENST00000495044 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
CCDC30-211ENST00000495044 SYNJ1O43426 1573 aa13.66□□□□□ -0.22
CCDC30-211ENST00000495044 SOGA1O94964 1423 aa13.66□□□□□ -0.22
CCDC30-211ENST00000495044 CLASP1Q7Z460 1538 aa13.66□□□□□ -0.22
CCDC30-211ENST00000495044 TDRD9Q8NDG6 1382 aaKnown RBP13.65□□□□□ -0.22
CCDC30-211ENST00000495044 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
CCDC30-211ENST00000495044 MAGI1Q96QZ7 1491 aaPredicted RBP13.62□□□□□ -0.23
CCDC30-211ENST00000495044 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
CCDC30-211ENST00000495044 GRIN2BQ13224 1484 aa13.58□□□□□ -0.23
CCDC30-211ENST00000495044 PBRM1Q86U86 1689 aa13.58□□□□□ -0.24
CCDC30-211ENST00000495044 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
CCDC30-211ENST00000495044 CUX1P39880 1505 aa13.56□□□□□ -0.24
CCDC30-211ENST00000495044 GAPVD1Q14C86 1478 aa13.52□□□□□ -0.25
CCDC30-211ENST00000495044 ABCA5Q8WWZ7 1642 aa13.47□□□□□ -0.25
CCDC30-211ENST00000495044 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
CCDC30-211ENST00000495044 POTEDQ86YR6 584 aa13.41□□□□□ -0.26
CCDC30-211ENST00000495044 GRIN2AQ12879 1464 aa13.41□□□□□ -0.26
CCDC30-211ENST00000495044 ERCC6L2Q5T890 1561 aa13.41□□□□□ -0.26
CCDC30-211ENST00000495044 ADAMTS12P58397 1594 aa13.4□□□□□ -0.26
CCDC30-211ENST00000495044 CEP170Q5SW79 1584 aa13.39□□□□□ -0.27
CCDC30-211ENST00000495044 SHROOM2Q13796 1616 aa13.35□□□□□ -0.27
CCDC30-211ENST00000495044 NUP160Q12769 1436 aa13.35□□□□□ -0.27
CCDC30-211ENST00000495044 WRNQ14191 1432 aaPredicted RBP eCLIP13.35□□□□□ -0.27
CCDC30-211ENST00000495044 KIF13AQ9H1H9 1805 aa13.33□□□□□ -0.28
CCDC30-211ENST00000495044 BIVM-ERCC5R4GMW8 1640 aa13.31□□□□□ -0.28
CCDC30-211ENST00000495044 FHAD1B1AJZ9 1412 aa13.31□□□□□ -0.28
CCDC30-211ENST00000495044 TOP2BQ02880 1626 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms