RNA–Protein interactions for RNA: ENST00000494346.1

RFTN2-204, Transcript of raftlin family member 2, humanhuman

TSL 2

Gene RFTN2, Length 951 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2-204ENST00000494346 NISCHQ9Y2I1 1504 aa24.24■■□□□ 1.47
RFTN2-204ENST00000494346 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
RFTN2-204ENST00000494346 ABCC9O60706 1549 aa21.29■■□□□ 1
RFTN2-204ENST00000494346 RB1CC1Q8TDY2 1594 aa20.44■□□□□ 0.86
RFTN2-204ENST00000494346 NACADO15069 1562 aa20.36■□□□□ 0.85
RFTN2-204ENST00000494346 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
RFTN2-204ENST00000494346 UNC13AQ9UPW8 1703 aa20.19■□□□□ 0.82
RFTN2-204ENST00000494346 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
RFTN2-204ENST00000494346 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
RFTN2-204ENST00000494346 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
RFTN2-204ENST00000494346 DCAF1Q9Y4B6 1507 aa20.04■□□□□ 0.8
RFTN2-204ENST00000494346 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
RFTN2-204ENST00000494346 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
RFTN2-204ENST00000494346 PABPN1Q86U42 306 aaKnown RBP eCLIP19.79■□□□□ 0.76
RFTN2-204ENST00000494346 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
RFTN2-204ENST00000494346 SHROOM4Q9ULL8 1493 aa19.57■□□□□ 0.72
RFTN2-204ENST00000494346 CHIC1Q5VXU3 224 aa19.45■□□□□ 0.7
RFTN2-204ENST00000494346 EIF4G1Q04637 1599 aaKnown RBP19.33■□□□□ 0.69
RFTN2-204ENST00000494346 CC2D2AQ9P2K1 1620 aa19.31■□□□□ 0.68
RFTN2-204ENST00000494346 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
RFTN2-204ENST00000494346 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
RFTN2-204ENST00000494346 BAZ1AQ9NRL2 1556 aaPredicted RBP18.81■□□□□ 0.6
RFTN2-204ENST00000494346 POTEDQ86YR6 584 aa18.75■□□□□ 0.59
RFTN2-204ENST00000494346 ATAD2BQ9ULI0 1458 aa18.75■□□□□ 0.59
RFTN2-204ENST00000494346 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
RFTN2-204ENST00000494346 NCAPD3P42695 1498 aa18.72■□□□□ 0.59
RFTN2-204ENST00000494346 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
RFTN2-204ENST00000494346 MROH2BQ7Z745 1585 aa18.71■□□□□ 0.59
RFTN2-204ENST00000494346 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
RFTN2-204ENST00000494346 BAZ1BQ9UIG0 1483 aaKnown RBP18.61■□□□□ 0.57
RFTN2-204ENST00000494346 WIZO95785 1651 aa18.57■□□□□ 0.56
RFTN2-204ENST00000494346 NESP48681 1621 aa18.41■□□□□ 0.54
RFTN2-204ENST00000494346 RSF1Q96T23 1441 aaPredicted RBP18.38■□□□□ 0.53
RFTN2-204ENST00000494346 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
RFTN2-204ENST00000494346 ERCC6Q03468 1493 aa18.33■□□□□ 0.53
RFTN2-204ENST00000494346 KIF21AQ7Z4S6 1674 aa18.32■□□□□ 0.52
RFTN2-204ENST00000494346 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
RFTN2-204ENST00000494346 THOC2Q8NI27 1593 aaKnown RBP18.24■□□□□ 0.51
RFTN2-204ENST00000494346 CUX2O14529 1486 aa18.2■□□□□ 0.5
RFTN2-204ENST00000494346 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
RFTN2-204ENST00000494346 CADPSQ9ULU8 1353 aa18.15■□□□□ 0.5
RFTN2-204ENST00000494346 PDS5BQ9NTI5 1447 aa18.12■□□□□ 0.49
RFTN2-204ENST00000494346 CFTRP13569 1480 aa18.06■□□□□ 0.48
RFTN2-204ENST00000494346 CCDC88BA6NC98 1476 aa18.03■□□□□ 0.48
RFTN2-204ENST00000494346 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
RFTN2-204ENST00000494346 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
RFTN2-204ENST00000494346 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
RFTN2-204ENST00000494346 WDR62O43379 1518 aa18■□□□□ 0.47
RFTN2-204ENST00000494346 URB2Q14146 1524 aaKnown RBP17.88■□□□□ 0.45
RFTN2-204ENST00000494346 SUPT5HO00267 1087 aaKnown RBP17.75■□□□□ 0.43
RFTN2-204ENST00000494346 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
RFTN2-204ENST00000494346 DNMBPQ6XZF7 1577 aa17.73■□□□□ 0.43
RFTN2-204ENST00000494346 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
RFTN2-204ENST00000494346 DNAJC5Q9H3Z4 198 aa17.69■□□□□ 0.42
RFTN2-204ENST00000494346 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
RFTN2-204ENST00000494346 IFT140Q96RY7 1462 aa17.61■□□□□ 0.41
RFTN2-204ENST00000494346 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
RFTN2-204ENST00000494346 EIF4G3O43432 1585 aaKnown RBP17.6■□□□□ 0.41
RFTN2-204ENST00000494346 ZNF608Q9ULD9 1512 aaPredicted RBP17.59■□□□□ 0.41
RFTN2-204ENST00000494346 CUX1P39880 1505 aa17.57■□□□□ 0.4
RFTN2-204ENST00000494346 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
RFTN2-204ENST00000494346 WDR97A6NE52 1622 aa17.52■□□□□ 0.4
RFTN2-204ENST00000494346 FGD5Q6ZNL6 1462 aa17.51■□□□□ 0.39
RFTN2-204ENST00000494346 RAD54L2Q9Y4B4 1467 aa17.48■□□□□ 0.39
RFTN2-204ENST00000494346 CHD1O14646 1710 aa17.47■□□□□ 0.39
RFTN2-204ENST00000494346 BIVM-ERCC5R4GMW8 1640 aa17.45■□□□□ 0.38
RFTN2-204ENST00000494346 AQRO60306 1485 aaKnown RBP eCLIP17.43■□□□□ 0.38
RFTN2-204ENST00000494346 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
RFTN2-204ENST00000494346 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
RFTN2-204ENST00000494346 SOGA1O94964 1423 aa17.41■□□□□ 0.38
RFTN2-204ENST00000494346 TOP2BQ02880 1626 aa17.39■□□□□ 0.38
RFTN2-204ENST00000494346 ABCA5Q8WWZ7 1642 aa17.35■□□□□ 0.37
RFTN2-204ENST00000494346 TDRD9Q8NDG6 1382 aaKnown RBP17.34■□□□□ 0.37
RFTN2-204ENST00000494346 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.36
RFTN2-204ENST00000494346 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
RFTN2-204ENST00000494346 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
RFTN2-204ENST00000494346 OSCARQ8IYS5 282 aa17.3■□□□□ 0.36
RFTN2-204ENST00000494346 GRIN2BQ13224 1484 aa17.27■□□□□ 0.36
RFTN2-204ENST00000494346 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
RFTN2-204ENST00000494346 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
RFTN2-204ENST00000494346 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
RFTN2-204ENST00000494346 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
RFTN2-204ENST00000494346 MAGI1Q96QZ7 1491 aaPredicted RBP17.25■□□□□ 0.35
RFTN2-204ENST00000494346 PHF23Q9BUL5 403 aaPredicted RBP17.23■□□□□ 0.35
RFTN2-204ENST00000494346 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
RFTN2-204ENST00000494346 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
RFTN2-204ENST00000494346 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
RFTN2-204ENST00000494346 FBLN2P98095 1184 aa17.17■□□□□ 0.34
RFTN2-204ENST00000494346 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
RFTN2-204ENST00000494346 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
RFTN2-204ENST00000494346 TRIM41Q8WV44 630 aa17.1■□□□□ 0.33
RFTN2-204ENST00000494346 CHMP7Q8WUX9 453 aaPredicted RBP17.09■□□□□ 0.33
RFTN2-204ENST00000494346 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
RFTN2-204ENST00000494346 CEP170Q5SW79 1584 aa17.06■□□□□ 0.32
RFTN2-204ENST00000494346 ARAP1Q96P48 1450 aa17.03■□□□□ 0.32
RFTN2-204ENST00000494346 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
RFTN2-204ENST00000494346 CUL7Q14999 1698 aa17.01■□□□□ 0.31
RFTN2-204ENST00000494346 NUP160Q12769 1436 aa16.98■□□□□ 0.31
RFTN2-204ENST00000494346 SHROOM2Q13796 1616 aa16.97■□□□□ 0.31
RFTN2-204ENST00000494346 RUSC2Q8N2Y8 1516 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms