RNA–Protein interactions for RNA: ENST00000494275.5

FGD4-207, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 1,439 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-207ENST00000494275 NISCHQ9Y2I1 1504 aa27.56■■■□□ 2
FGD4-207ENST00000494275 ABCC9O60706 1549 aa24.66■■□□□ 1.54
FGD4-207ENST00000494275 CCDC180Q9P1Z9 1646 aa24.63■■□□□ 1.53
FGD4-207ENST00000494275 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
FGD4-207ENST00000494275 RB1CC1Q8TDY2 1594 aa23.47■■□□□ 1.35
FGD4-207ENST00000494275 NACADO15069 1562 aa23.26■■□□□ 1.31
FGD4-207ENST00000494275 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
FGD4-207ENST00000494275 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
FGD4-207ENST00000494275 ZCCHC6Q5VYS8 1495 aaKnown RBP22.99■■□□□ 1.27
FGD4-207ENST00000494275 MYO15BQ96JP2 1530 aa22.93■■□□□ 1.26
FGD4-207ENST00000494275 DCAF8L2P0C7V8 631 aa22.91■■□□□ 1.26
FGD4-207ENST00000494275 DCAF1Q9Y4B6 1507 aa22.89■■□□□ 1.25
FGD4-207ENST00000494275 PABPN1Q86U42 306 aaKnown RBP eCLIP22.85■■□□□ 1.25
FGD4-207ENST00000494275 BICRAQ9NZM4 1560 aa22.78■■□□□ 1.24
FGD4-207ENST00000494275 CHIC1Q5VXU3 224 aa22.68■■□□□ 1.22
FGD4-207ENST00000494275 SHROOM4Q9ULL8 1493 aa22.5■■□□□ 1.19
FGD4-207ENST00000494275 CC2D2AQ9P2K1 1620 aa22.33■■□□□ 1.17
FGD4-207ENST00000494275 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
FGD4-207ENST00000494275 CECR2Q9BXF3 1484 aa22.25■■□□□ 1.15
FGD4-207ENST00000494275 EIF4G1Q04637 1599 aaKnown RBP22.24■■□□□ 1.15
FGD4-207ENST00000494275 DNAJC5Q9H3Z4 198 aa21.55■■□□□ 1.04
FGD4-207ENST00000494275 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
FGD4-207ENST00000494275 CUX2O14529 1486 aa21.41■■□□□ 1.02
FGD4-207ENST00000494275 BAZ1AQ9NRL2 1556 aaPredicted RBP21.33■■□□□ 1.01
FGD4-207ENST00000494275 ERCC6Q03468 1493 aa21.32■■□□□ 1
FGD4-207ENST00000494275 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
FGD4-207ENST00000494275 SMARCA4P51532 1647 aa21.31■■□□□ 1
FGD4-207ENST00000494275 HMGXB3Q12766 1538 aa21.3■■□□□ 1
FGD4-207ENST00000494275 SMARCA2P51531 1590 aa21.3■■□□□ 1
FGD4-207ENST00000494275 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
FGD4-207ENST00000494275 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.98
FGD4-207ENST00000494275 NESP48681 1621 aa21.12■□□□□ 0.97
FGD4-207ENST00000494275 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
FGD4-207ENST00000494275 RSF1Q96T23 1441 aaPredicted RBP21.1■□□□□ 0.97
FGD4-207ENST00000494275 THOC2Q8NI27 1593 aaKnown RBP21.04■□□□□ 0.96
FGD4-207ENST00000494275 LAMC3Q9Y6N6 1575 aa21.04■□□□□ 0.96
FGD4-207ENST00000494275 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
FGD4-207ENST00000494275 WIZO95785 1651 aa20.92■□□□□ 0.94
FGD4-207ENST00000494275 PDS5BQ9NTI5 1447 aa20.86■□□□□ 0.93
FGD4-207ENST00000494275 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
FGD4-207ENST00000494275 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
FGD4-207ENST00000494275 MRC2Q9UBG0 1479 aa20.7■□□□□ 0.9
FGD4-207ENST00000494275 WDR62O43379 1518 aa20.69■□□□□ 0.9
FGD4-207ENST00000494275 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
FGD4-207ENST00000494275 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.89
FGD4-207ENST00000494275 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
FGD4-207ENST00000494275 FANCD2Q9BXW9 1451 aa20.52■□□□□ 0.88
FGD4-207ENST00000494275 CFTRP13569 1480 aa20.49■□□□□ 0.87
FGD4-207ENST00000494275 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
FGD4-207ENST00000494275 PRDM2Q13029 1718 aa20.46■□□□□ 0.87
FGD4-207ENST00000494275 SENP3Q9H4L4 574 aaPredicted RBP20.43■□□□□ 0.86
FGD4-207ENST00000494275 URB2Q14146 1524 aaKnown RBP20.35■□□□□ 0.85
FGD4-207ENST00000494275 OSCARQ8IYS5 282 aa20.32■□□□□ 0.84
FGD4-207ENST00000494275 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
FGD4-207ENST00000494275 IFT140Q96RY7 1462 aa20.17■□□□□ 0.82
FGD4-207ENST00000494275 RIMBP3CA6NJZ7 1639 aa20.16■□□□□ 0.82
FGD4-207ENST00000494275 RIMBP3BA6NNM3 1639 aa20.16■□□□□ 0.82
FGD4-207ENST00000494275 RIMBP3Q9UFD9 1639 aa20.16■□□□□ 0.82
FGD4-207ENST00000494275 TOPBP1Q92547 1522 aa20.12■□□□□ 0.81
FGD4-207ENST00000494275 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
FGD4-207ENST00000494275 ABCC8Q09428 1581 aa20.1■□□□□ 0.81
FGD4-207ENST00000494275 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.8
FGD4-207ENST00000494275 DNMBPQ6XZF7 1577 aa20.06■□□□□ 0.8
FGD4-207ENST00000494275 ARHGEF11O15085 1522 aa20.05■□□□□ 0.8
FGD4-207ENST00000494275 CHD1O14646 1710 aa20.03■□□□□ 0.8
FGD4-207ENST00000494275 TARBP1Q13395 1621 aaKnown RBP20■□□□□ 0.79
FGD4-207ENST00000494275 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.78
FGD4-207ENST00000494275 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
FGD4-207ENST00000494275 WRNQ14191 1432 aaPredicted RBP eCLIP19.87■□□□□ 0.77
FGD4-207ENST00000494275 CUX1P39880 1505 aa19.86■□□□□ 0.77
FGD4-207ENST00000494275 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
FGD4-207ENST00000494275 CYB5RLQ6IPT4 315 aa19.83■□□□□ 0.76
FGD4-207ENST00000494275 ARAP1Q96P48 1450 aa19.81■□□□□ 0.76
FGD4-207ENST00000494275 RAD54L2Q9Y4B4 1467 aa19.78■□□□□ 0.76
FGD4-207ENST00000494275 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
FGD4-207ENST00000494275 SOGA1O94964 1423 aa19.77■□□□□ 0.76
FGD4-207ENST00000494275 FBLN2P98095 1184 aa19.76■□□□□ 0.75
FGD4-207ENST00000494275 FGD5Q6ZNL6 1462 aa19.76■□□□□ 0.75
FGD4-207ENST00000494275 BIVM-ERCC5R4GMW8 1640 aa19.74■□□□□ 0.75
FGD4-207ENST00000494275 CLASP1Q7Z460 1538 aa19.73■□□□□ 0.75
FGD4-207ENST00000494275 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
FGD4-207ENST00000494275 SNAPC4Q5SXM2 1469 aa19.72■□□□□ 0.75
FGD4-207ENST00000494275 TDRD9Q8NDG6 1382 aaKnown RBP19.72■□□□□ 0.75
FGD4-207ENST00000494275 MAGI1Q96QZ7 1491 aaPredicted RBP19.71■□□□□ 0.75
FGD4-207ENST00000494275 PBRM1Q86U86 1689 aa19.67■□□□□ 0.74
FGD4-207ENST00000494275 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
FGD4-207ENST00000494275 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
FGD4-207ENST00000494275 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
FGD4-207ENST00000494275 SYNJ2O15056 1496 aa19.62■□□□□ 0.73
FGD4-207ENST00000494275 CHMP7Q8WUX9 453 aaPredicted RBP19.62■□□□□ 0.73
FGD4-207ENST00000494275 GAPVD1Q14C86 1478 aa19.55■□□□□ 0.72
FGD4-207ENST00000494275 ABCA5Q8WWZ7 1642 aa19.55■□□□□ 0.72
FGD4-207ENST00000494275 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
FGD4-207ENST00000494275 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
FGD4-207ENST00000494275 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
FGD4-207ENST00000494275 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
FGD4-207ENST00000494275 IGF1RP08069 1367 aa19.38■□□□□ 0.69
FGD4-207ENST00000494275 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
FGD4-207ENST00000494275 ERCC6L2Q5T890 1561 aa19.36■□□□□ 0.69
FGD4-207ENST00000494275 SHROOM2Q13796 1616 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms