RNA–Protein interactions for RNA: ENST00000492959.1

GTF2E1-204, Transcript of general transcription factor IIE subunit 1, humanhuman

TSL 4

Gene GTF2E1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-204ENST00000492959 NISCHQ9Y2I1 1504 aa28.54■■■□□ 2.16
GTF2E1-204ENST00000492959 ABCC9O60706 1549 aa25.72■■□□□ 1.71
GTF2E1-204ENST00000492959 CCDC180Q9P1Z9 1646 aa25.69■■□□□ 1.7
GTF2E1-204ENST00000492959 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
GTF2E1-204ENST00000492959 NACADO15069 1562 aa24.3■■□□□ 1.48
GTF2E1-204ENST00000492959 DNAJC5BQ9UF47 199 aa24.15■■□□□ 1.46
GTF2E1-204ENST00000492959 DCAF8L2P0C7V8 631 aa24.12■■□□□ 1.45
GTF2E1-204ENST00000492959 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
GTF2E1-204ENST00000492959 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.43
GTF2E1-204ENST00000492959 PABPN1Q86U42 306 aaKnown RBP eCLIP23.91■■□□□ 1.42
GTF2E1-204ENST00000492959 UNC13AQ9UPW8 1703 aa23.88■■□□□ 1.41
GTF2E1-204ENST00000492959 BICRAQ9NZM4 1560 aa23.72■■□□□ 1.39
GTF2E1-204ENST00000492959 ZCCHC6Q5VYS8 1495 aaKnown RBP23.63■■□□□ 1.37
GTF2E1-204ENST00000492959 DCAF1Q9Y4B6 1507 aa23.6■■□□□ 1.37
GTF2E1-204ENST00000492959 CHIC1Q5VXU3 224 aa23.49■■□□□ 1.35
GTF2E1-204ENST00000492959 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
GTF2E1-204ENST00000492959 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
GTF2E1-204ENST00000492959 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
GTF2E1-204ENST00000492959 CECR2Q9BXF3 1484 aa23.2■■□□□ 1.3
GTF2E1-204ENST00000492959 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
GTF2E1-204ENST00000492959 NCAPD3P42695 1498 aa22.42■■□□□ 1.18
GTF2E1-204ENST00000492959 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.16
GTF2E1-204ENST00000492959 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
GTF2E1-204ENST00000492959 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
GTF2E1-204ENST00000492959 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
GTF2E1-204ENST00000492959 ERCC6Q03468 1493 aa22.26■■□□□ 1.15
GTF2E1-204ENST00000492959 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
GTF2E1-204ENST00000492959 CUX2O14529 1486 aa22.25■■□□□ 1.15
GTF2E1-204ENST00000492959 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
GTF2E1-204ENST00000492959 BAZ1BQ9UIG0 1483 aaKnown RBP22.13■■□□□ 1.13
GTF2E1-204ENST00000492959 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.13
GTF2E1-204ENST00000492959 NESP48681 1621 aa22.05■■□□□ 1.12
GTF2E1-204ENST00000492959 MROH2BQ7Z745 1585 aa21.96■■□□□ 1.11
GTF2E1-204ENST00000492959 LAMC3Q9Y6N6 1575 aa21.95■■□□□ 1.1
GTF2E1-204ENST00000492959 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
GTF2E1-204ENST00000492959 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
GTF2E1-204ENST00000492959 KIF21AQ7Z4S6 1674 aa21.78■■□□□ 1.08
GTF2E1-204ENST00000492959 CADPSQ9ULU8 1353 aa21.74■■□□□ 1.07
GTF2E1-204ENST00000492959 WIZO95785 1651 aa21.69■■□□□ 1.06
GTF2E1-204ENST00000492959 MRC2Q9UBG0 1479 aa21.63■■□□□ 1.05
GTF2E1-204ENST00000492959 WDR62O43379 1518 aa21.57■■□□□ 1.04
GTF2E1-204ENST00000492959 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
GTF2E1-204ENST00000492959 RSF1Q96T23 1441 aaPredicted RBP21.49■■□□□ 1.03
GTF2E1-204ENST00000492959 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
GTF2E1-204ENST00000492959 CFTRP13569 1480 aa21.46■■□□□ 1.03
GTF2E1-204ENST00000492959 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
GTF2E1-204ENST00000492959 URB2Q14146 1524 aaKnown RBP21.29■■□□□ 1
GTF2E1-204ENST00000492959 TRIM41Q8WV44 630 aa21.28■■□□□ 1
GTF2E1-204ENST00000492959 PRDM2Q13029 1718 aa21.26■□□□□ 0.99
GTF2E1-204ENST00000492959 OSCARQ8IYS5 282 aa21.22■□□□□ 0.99
GTF2E1-204ENST00000492959 CCDC88BA6NC98 1476 aa21.19■□□□□ 0.98
GTF2E1-204ENST00000492959 IFT140Q96RY7 1462 aa21.11■□□□□ 0.97
GTF2E1-204ENST00000492959 ABCC8Q09428 1581 aa21.07■□□□□ 0.96
GTF2E1-204ENST00000492959 TOPBP1Q92547 1522 aa21.06■□□□□ 0.96
GTF2E1-204ENST00000492959 ZNF608Q9ULD9 1512 aaPredicted RBP21.03■□□□□ 0.96
GTF2E1-204ENST00000492959 DNMBPQ6XZF7 1577 aa20.99■□□□□ 0.95
GTF2E1-204ENST00000492959 EIF4G3O43432 1585 aaKnown RBP20.94■□□□□ 0.94
GTF2E1-204ENST00000492959 RIMBP3CA6NJZ7 1639 aa20.92■□□□□ 0.94
GTF2E1-204ENST00000492959 RIMBP3BA6NNM3 1639 aa20.92■□□□□ 0.94
GTF2E1-204ENST00000492959 RIMBP3Q9UFD9 1639 aa20.92■□□□□ 0.94
GTF2E1-204ENST00000492959 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
GTF2E1-204ENST00000492959 ARHGEF11O15085 1522 aa20.85■□□□□ 0.93
GTF2E1-204ENST00000492959 AQRO60306 1485 aaKnown RBP eCLIP20.84■□□□□ 0.93
GTF2E1-204ENST00000492959 POLA1P09884 1462 aaPredicted RBP20.84■□□□□ 0.93
GTF2E1-204ENST00000492959 CHD1O14646 1710 aa20.79■□□□□ 0.92
GTF2E1-204ENST00000492959 SOGA1O94964 1423 aa20.76■□□□□ 0.91
GTF2E1-204ENST00000492959 FBLN2P98095 1184 aa20.75■□□□□ 0.91
GTF2E1-204ENST00000492959 RAD54L2Q9Y4B4 1467 aa20.74■□□□□ 0.91
GTF2E1-204ENST00000492959 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
GTF2E1-204ENST00000492959 CYB5RLQ6IPT4 315 aa20.7■□□□□ 0.9
GTF2E1-204ENST00000492959 TDRD9Q8NDG6 1382 aaKnown RBP20.7■□□□□ 0.9
GTF2E1-204ENST00000492959 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
GTF2E1-204ENST00000492959 CUX1P39880 1505 aa20.65■□□□□ 0.9
GTF2E1-204ENST00000492959 SNAPC4Q5SXM2 1469 aa20.64■□□□□ 0.89
GTF2E1-204ENST00000492959 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
GTF2E1-204ENST00000492959 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
GTF2E1-204ENST00000492959 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
GTF2E1-204ENST00000492959 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
GTF2E1-204ENST00000492959 GRIN2BQ13224 1484 aa20.6■□□□□ 0.89
GTF2E1-204ENST00000492959 SYNJ1O43426 1573 aa20.57■□□□□ 0.88
GTF2E1-204ENST00000492959 CLASP1Q7Z460 1538 aa20.56■□□□□ 0.88
GTF2E1-204ENST00000492959 SYNJ2O15056 1496 aa20.54■□□□□ 0.88
GTF2E1-204ENST00000492959 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.88
GTF2E1-204ENST00000492959 GAPVD1Q14C86 1478 aa20.5■□□□□ 0.87
GTF2E1-204ENST00000492959 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
GTF2E1-204ENST00000492959 SENP3Q9H4L4 574 aaPredicted RBP20.48■□□□□ 0.87
GTF2E1-204ENST00000492959 SUPT5HO00267 1087 aaKnown RBP20.47■□□□□ 0.87
GTF2E1-204ENST00000492959 ABCA10Q8WWZ4 1543 aa20.47■□□□□ 0.87
GTF2E1-204ENST00000492959 ABCA5Q8WWZ7 1642 aa20.44■□□□□ 0.86
GTF2E1-204ENST00000492959 WRNQ14191 1432 aaPredicted RBP eCLIP20.39■□□□□ 0.85
GTF2E1-204ENST00000492959 GRIN2AQ12879 1464 aa20.32■□□□□ 0.84
GTF2E1-204ENST00000492959 TOP2BQ02880 1626 aa20.32■□□□□ 0.84
GTF2E1-204ENST00000492959 BIVM-ERCC5R4GMW8 1640 aa20.31■□□□□ 0.84
GTF2E1-204ENST00000492959 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
GTF2E1-204ENST00000492959 NUP160Q12769 1436 aa20.26■□□□□ 0.83
GTF2E1-204ENST00000492959 FHAD1B1AJZ9 1412 aa20.25■□□□□ 0.83
GTF2E1-204ENST00000492959 CEP170Q5SW79 1584 aa20.23■□□□□ 0.83
GTF2E1-204ENST00000492959 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
GTF2E1-204ENST00000492959 ERCC6L2Q5T890 1561 aa20.19■□□□□ 0.82
GTF2E1-204ENST00000492959 SHROOM2Q13796 1616 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms