RNA–Protein interactions for RNA: ENST00000492947.1

AGRN-209, Transcript of agrin, humanhuman

TSL 2

Gene AGRN, Length 690 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-209ENST00000492947 NISCHQ9Y2I1 1504 aa41.88■■■■■ 4.29
AGRN-209ENST00000492947 CCDC180Q9P1Z9 1646 aa37.39■■■■□ 3.58
AGRN-209ENST00000492947 ABCC9O60706 1549 aa37.06■■■■□ 3.52
AGRN-209ENST00000492947 RB1CC1Q8TDY2 1594 aa35.41■■■■□ 3.26
AGRN-209ENST00000492947 NACADO15069 1562 aa35.3■■■■□ 3.24
AGRN-209ENST00000492947 MYO15BQ96JP2 1530 aa35.01■■■■□ 3.19
AGRN-209ENST00000492947 DCAF8L2P0C7V8 631 aa34.99■■■■□ 3.19
AGRN-209ENST00000492947 ZCCHC6Q5VYS8 1495 aaKnown RBP34.78■■■■□ 3.16
AGRN-209ENST00000492947 DCAF1Q9Y4B6 1507 aa34.65■■■■□ 3.14
AGRN-209ENST00000492947 DNAJC5BQ9UF47 199 aa34.64■■■■□ 3.14
AGRN-209ENST00000492947 UNC13AQ9UPW8 1703 aa34.63■■■■□ 3.13
AGRN-209ENST00000492947 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
AGRN-209ENST00000492947 BICRAQ9NZM4 1560 aa34.5■■■■□ 3.11
AGRN-209ENST00000492947 SCRIBQ14160 1630 aa34.03■■■■□ 3.04
AGRN-209ENST00000492947 SHROOM4Q9ULL8 1493 aa34.01■■■■□ 3.04
AGRN-209ENST00000492947 CHIC1Q5VXU3 224 aa33.62■■■□□ 2.97
AGRN-209ENST00000492947 EIF4G1Q04637 1599 aaKnown RBP33.55■■■□□ 2.96
AGRN-209ENST00000492947 CC2D2AQ9P2K1 1620 aa33.52■■■□□ 2.96
AGRN-209ENST00000492947 AEBP2Q6ZN18 517 aaPredicted RBP33.4■■■□□ 2.94
AGRN-209ENST00000492947 CECR2Q9BXF3 1484 aa33.37■■■□□ 2.93
AGRN-209ENST00000492947 NCAPD3P42695 1498 aa32.65■■■□□ 2.82
AGRN-209ENST00000492947 ATAD2BQ9ULI0 1458 aa32.56■■■□□ 2.8
AGRN-209ENST00000492947 SMARCA4P51532 1647 aa32.56■■■□□ 2.8
AGRN-209ENST00000492947 BAZ1AQ9NRL2 1556 aaPredicted RBP32.43■■■□□ 2.78
AGRN-209ENST00000492947 SMARCA2P51531 1590 aa32.41■■■□□ 2.78
AGRN-209ENST00000492947 HMGXB3Q12766 1538 aa32.38■■■□□ 2.77
AGRN-209ENST00000492947 PEG3Q9GZU2 1588 aa32.33■■■□□ 2.77
AGRN-209ENST00000492947 MROH2BQ7Z745 1585 aa32.28■■■□□ 2.76
AGRN-209ENST00000492947 BAZ1BQ9UIG0 1483 aaKnown RBP32.17■■■□□ 2.74
AGRN-209ENST00000492947 NESP48681 1621 aa31.98■■■□□ 2.71
AGRN-209ENST00000492947 ERCC6Q03468 1493 aa31.89■■■□□ 2.7
AGRN-209ENST00000492947 WIZO95785 1651 aa31.85■■■□□ 2.69
AGRN-209ENST00000492947 CUX2O14529 1486 aa31.84■■■□□ 2.69
AGRN-209ENST00000492947 LAMC3Q9Y6N6 1575 aa31.77■■■□□ 2.68
AGRN-209ENST00000492947 RSF1Q96T23 1441 aaPredicted RBP31.74■■■□□ 2.67
AGRN-209ENST00000492947 CADPSQ9ULU8 1353 aa31.62■■■□□ 2.65
AGRN-209ENST00000492947 THOC2Q8NI27 1593 aaKnown RBP31.6■■■□□ 2.65
AGRN-209ENST00000492947 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
AGRN-209ENST00000492947 KIF21AQ7Z4S6 1674 aa31.51■■■□□ 2.64
AGRN-209ENST00000492947 DNAJC5Q9H3Z4 198 aa31.51■■■□□ 2.63
AGRN-209ENST00000492947 TOP2AP11388 1531 aaKnown RBP31.48■■■□□ 2.63
AGRN-209ENST00000492947 CFTRP13569 1480 aa31.36■■■□□ 2.61
AGRN-209ENST00000492947 MRC2Q9UBG0 1479 aa31.28■■■□□ 2.6
AGRN-209ENST00000492947 WDR62O43379 1518 aa31.24■■■□□ 2.59
AGRN-209ENST00000492947 FANCD2Q9BXW9 1451 aa31.22■■■□□ 2.59
AGRN-209ENST00000492947 CEP164Q9UPV0 1460 aa31.19■■■□□ 2.58
AGRN-209ENST00000492947 CCDC88BA6NC98 1476 aa31.15■■■□□ 2.58
AGRN-209ENST00000492947 URB2Q14146 1524 aaKnown RBP31■■■□□ 2.55
AGRN-209ENST00000492947 PRDM2Q13029 1718 aa30.94■■■□□ 2.54
AGRN-209ENST00000492947 TOPBP1Q92547 1522 aa30.69■■■□□ 2.5
AGRN-209ENST00000492947 ABCC8Q09428 1581 aa30.6■■■□□ 2.49
AGRN-209ENST00000492947 IFT140Q96RY7 1462 aa30.59■■■□□ 2.49
AGRN-209ENST00000492947 DNMBPQ6XZF7 1577 aa30.58■■■□□ 2.49
AGRN-209ENST00000492947 ZNF608Q9ULD9 1512 aaPredicted RBP30.56■■■□□ 2.48
AGRN-209ENST00000492947 TARBP1Q13395 1621 aaKnown RBP30.44■■■□□ 2.46
AGRN-209ENST00000492947 POLA1P09884 1462 aaPredicted RBP30.41■■■□□ 2.46
AGRN-209ENST00000492947 OSCARQ8IYS5 282 aa30.4■■■□□ 2.46
AGRN-209ENST00000492947 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
AGRN-209ENST00000492947 EIF4G3O43432 1585 aaKnown RBP30.35■■■□□ 2.45
AGRN-209ENST00000492947 CUX1P39880 1505 aa30.3■■■□□ 2.44
AGRN-209ENST00000492947 AQRO60306 1485 aaKnown RBP eCLIP30.3■■■□□ 2.441e-14■■■■■ 58.4
AGRN-209ENST00000492947 RAD54L2Q9Y4B4 1467 aa30.27■■■□□ 2.44
AGRN-209ENST00000492947 SOGA1O94964 1423 aa30.23■■■□□ 2.43
AGRN-209ENST00000492947 FGD5Q6ZNL6 1462 aa30.23■■■□□ 2.43
AGRN-209ENST00000492947 TDRD9Q8NDG6 1382 aaKnown RBP30.15■■■□□ 2.42
AGRN-209ENST00000492947 WDR97A6NE52 1622 aa30.09■■■□□ 2.41
AGRN-209ENST00000492947 TRIM41Q8WV44 630 aa30.09■■■□□ 2.41
AGRN-209ENST00000492947 CHD1O14646 1710 aa30.02■■■□□ 2.4
AGRN-209ENST00000492947 RIMBP3CA6NJZ7 1639 aa29.99■■■□□ 2.39
AGRN-209ENST00000492947 RIMBP3BA6NNM3 1639 aa29.99■■■□□ 2.39
AGRN-209ENST00000492947 RIMBP3Q9UFD9 1639 aa29.99■■■□□ 2.39
AGRN-209ENST00000492947 SNAPC4Q5SXM2 1469 aa29.96■■■□□ 2.39
AGRN-209ENST00000492947 ARHGEF11O15085 1522 aa29.95■■■□□ 2.38
AGRN-209ENST00000492947 ABCA10Q8WWZ4 1543 aa29.94■■■□□ 2.38
AGRN-209ENST00000492947 GRIN2BQ13224 1484 aa29.93■■■□□ 2.38
AGRN-209ENST00000492947 MAGI1Q96QZ7 1491 aaPredicted RBP29.91■■■□□ 2.38
AGRN-209ENST00000492947 FBLN2P98095 1184 aa29.88■■■□□ 2.37
AGRN-209ENST00000492947 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
AGRN-209ENST00000492947 TOP2BQ02880 1626 aa29.87■■■□□ 2.37
AGRN-209ENST00000492947 ABCA5Q8WWZ7 1642 aa29.86■■■□□ 2.37
AGRN-209ENST00000492947 BIVM-ERCC5R4GMW8 1640 aa29.86■■■□□ 2.37
AGRN-209ENST00000492947 WRNQ14191 1432 aaPredicted RBP eCLIP29.86■■■□□ 2.37
AGRN-209ENST00000492947 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
AGRN-209ENST00000492947 SYNJ2O15056 1496 aa29.81■■■□□ 2.36
AGRN-209ENST00000492947 CLASP1Q7Z460 1538 aa29.8■■■□□ 2.36
AGRN-209ENST00000492947 PBRM1Q86U86 1689 aa29.79■■■□□ 2.36
AGRN-209ENST00000492947 CHMP7Q8WUX9 453 aaPredicted RBP29.77■■■□□ 2.36
AGRN-209ENST00000492947 ARAP1Q96P48 1450 aa29.7■■■□□ 2.35
AGRN-209ENST00000492947 CYB5RLQ6IPT4 315 aa29.65■■■□□ 2.34
AGRN-209ENST00000492947 PHF23Q9BUL5 403 aaPredicted RBP29.65■■■□□ 2.34
AGRN-209ENST00000492947 ADAMTS12P58397 1594 aa29.58■■■□□ 2.33
AGRN-209ENST00000492947 GRIN2AQ12879 1464 aa29.56■■■□□ 2.32
AGRN-209ENST00000492947 ERICH3Q5RHP9 1530 aa29.55■■■□□ 2.32
AGRN-209ENST00000492947 FHAD1B1AJZ9 1412 aa29.52■■■□□ 2.32
AGRN-209ENST00000492947 NUP160Q12769 1436 aa29.52■■■□□ 2.32
AGRN-209ENST00000492947 CEP170Q5SW79 1584 aa29.46■■■□□ 2.31
AGRN-209ENST00000492947 ERCC6L2Q5T890 1561 aa29.35■■■□□ 2.29
AGRN-209ENST00000492947 SHROOM2Q13796 1616 aa29.34■■■□□ 2.29
AGRN-209ENST00000492947 IGF1RP08069 1367 aa29.3■■■□□ 2.28
AGRN-209ENST00000492947 KIF27Q86VH2 1401 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms