RNA–Protein interactions for RNA: ENST00000492671.1

TRAF3IP2-210, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 3

Gene TRAF3IP2, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-210ENST00000492671 NISCHQ9Y2I1 1504 aa29.69■■■□□ 2.34
TRAF3IP2-210ENST00000492671 CCDC180Q9P1Z9 1646 aa26.5■■□□□ 1.83
TRAF3IP2-210ENST00000492671 ABCC9O60706 1549 aa26.43■■□□□ 1.82
TRAF3IP2-210ENST00000492671 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
TRAF3IP2-210ENST00000492671 RB1CC1Q8TDY2 1594 aa25.13■■□□□ 1.61
TRAF3IP2-210ENST00000492671 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
TRAF3IP2-210ENST00000492671 NACADO15069 1562 aa24.97■■□□□ 1.59
TRAF3IP2-210ENST00000492671 UNC13AQ9UPW8 1703 aa24.71■■□□□ 1.55
TRAF3IP2-210ENST00000492671 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
TRAF3IP2-210ENST00000492671 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.54
TRAF3IP2-210ENST00000492671 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.53
TRAF3IP2-210ENST00000492671 MYO15BQ96JP2 1530 aa24.61■■□□□ 1.53
TRAF3IP2-210ENST00000492671 BICRAQ9NZM4 1560 aa24.47■■□□□ 1.51
TRAF3IP2-210ENST00000492671 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
TRAF3IP2-210ENST00000492671 SCRIBQ14160 1630 aa24.31■■□□□ 1.48
TRAF3IP2-210ENST00000492671 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
TRAF3IP2-210ENST00000492671 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
TRAF3IP2-210ENST00000492671 CC2D2AQ9P2K1 1620 aa23.85■■□□□ 1.41
TRAF3IP2-210ENST00000492671 EIF4G1Q04637 1599 aaKnown RBP23.82■■□□□ 1.4
TRAF3IP2-210ENST00000492671 CECR2Q9BXF3 1484 aa23.71■■□□□ 1.39
TRAF3IP2-210ENST00000492671 SMARCA4P51532 1647 aa23.14■■□□□ 1.29
TRAF3IP2-210ENST00000492671 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.29
TRAF3IP2-210ENST00000492671 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
TRAF3IP2-210ENST00000492671 BAZ1AQ9NRL2 1556 aaPredicted RBP22.99■■□□□ 1.27
TRAF3IP2-210ENST00000492671 SMARCA2P51531 1590 aa22.97■■□□□ 1.27
TRAF3IP2-210ENST00000492671 MROH2BQ7Z745 1585 aa22.95■■□□□ 1.26
TRAF3IP2-210ENST00000492671 HMGXB3Q12766 1538 aa22.9■■□□□ 1.26
TRAF3IP2-210ENST00000492671 BAZ1BQ9UIG0 1483 aaKnown RBP22.86■■□□□ 1.25
TRAF3IP2-210ENST00000492671 PEG3Q9GZU2 1588 aa22.82■■□□□ 1.24
TRAF3IP2-210ENST00000492671 NESP48681 1621 aa22.79■■□□□ 1.24
TRAF3IP2-210ENST00000492671 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
TRAF3IP2-210ENST00000492671 WIZO95785 1651 aa22.73■■□□□ 1.23
TRAF3IP2-210ENST00000492671 CUX2O14529 1486 aa22.53■■□□□ 1.2
TRAF3IP2-210ENST00000492671 LAMC3Q9Y6N6 1575 aa22.51■■□□□ 1.19
TRAF3IP2-210ENST00000492671 RSF1Q96T23 1441 aaPredicted RBP22.51■■□□□ 1.19
TRAF3IP2-210ENST00000492671 KIF21AQ7Z4S6 1674 aa22.5■■□□□ 1.19
TRAF3IP2-210ENST00000492671 THOC2Q8NI27 1593 aaKnown RBP22.45■■□□□ 1.18
TRAF3IP2-210ENST00000492671 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
TRAF3IP2-210ENST00000492671 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
TRAF3IP2-210ENST00000492671 TOP2AP11388 1531 aaKnown RBP22.34■■□□□ 1.17
TRAF3IP2-210ENST00000492671 DNAJC5Q9H3Z4 198 aa22.33■■□□□ 1.17
TRAF3IP2-210ENST00000492671 MRC2Q9UBG0 1479 aa22.21■■□□□ 1.15
TRAF3IP2-210ENST00000492671 CFTRP13569 1480 aa22.19■■□□□ 1.14
TRAF3IP2-210ENST00000492671 FANCD2Q9BXW9 1451 aa22.18■■□□□ 1.14
TRAF3IP2-210ENST00000492671 CEP164Q9UPV0 1460 aa22.16■■□□□ 1.14
TRAF3IP2-210ENST00000492671 WDR62O43379 1518 aa22.14■■□□□ 1.13
TRAF3IP2-210ENST00000492671 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.13
TRAF3IP2-210ENST00000492671 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
TRAF3IP2-210ENST00000492671 URB2Q14146 1524 aaKnown RBP22.02■■□□□ 1.12
TRAF3IP2-210ENST00000492671 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
TRAF3IP2-210ENST00000492671 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
TRAF3IP2-210ENST00000492671 ZNF608Q9ULD9 1512 aaPredicted RBP21.75■■□□□ 1.07
TRAF3IP2-210ENST00000492671 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
TRAF3IP2-210ENST00000492671 IFT140Q96RY7 1462 aa21.69■■□□□ 1.06
TRAF3IP2-210ENST00000492671 SENP3Q9H4L4 574 aaPredicted RBP21.67■■□□□ 1.06
TRAF3IP2-210ENST00000492671 ABCC8Q09428 1581 aa21.64■■□□□ 1.05
TRAF3IP2-210ENST00000492671 EIF4G3O43432 1585 aaKnown RBP21.61■■□□□ 1.05
TRAF3IP2-210ENST00000492671 TARBP1Q13395 1621 aaKnown RBP21.6■■□□□ 1.05
TRAF3IP2-210ENST00000492671 OSCARQ8IYS5 282 aa21.59■■□□□ 1.05
TRAF3IP2-210ENST00000492671 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.05
TRAF3IP2-210ENST00000492671 TRIM41Q8WV44 630 aa21.58■■□□□ 1.05
TRAF3IP2-210ENST00000492671 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.04
TRAF3IP2-210ENST00000492671 AQRO60306 1485 aaKnown RBP eCLIP21.57■■□□□ 1.04
TRAF3IP2-210ENST00000492671 CUX1P39880 1505 aa21.54■■□□□ 1.04
TRAF3IP2-210ENST00000492671 FGD5Q6ZNL6 1462 aa21.51■■□□□ 1.03
TRAF3IP2-210ENST00000492671 SOGA1O94964 1423 aa21.49■■□□□ 1.03
TRAF3IP2-210ENST00000492671 PHF23Q9BUL5 403 aaPredicted RBP21.49■■□□□ 1.03
TRAF3IP2-210ENST00000492671 TDRD9Q8NDG6 1382 aaKnown RBP21.48■■□□□ 1.03
TRAF3IP2-210ENST00000492671 CHD1O14646 1710 aa21.46■■□□□ 1.03
TRAF3IP2-210ENST00000492671 FBLN2P98095 1184 aa21.41■■□□□ 1.02
TRAF3IP2-210ENST00000492671 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
TRAF3IP2-210ENST00000492671 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
TRAF3IP2-210ENST00000492671 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
TRAF3IP2-210ENST00000492671 WDR97A6NE52 1622 aa21.34■■□□□ 1.01
TRAF3IP2-210ENST00000492671 SNAPC4Q5SXM2 1469 aa21.32■■□□□ 1
TRAF3IP2-210ENST00000492671 ARHGEF11O15085 1522 aa21.28■■□□□ 1
TRAF3IP2-210ENST00000492671 PBRM1Q86U86 1689 aa21.26■□□□□ 0.99
TRAF3IP2-210ENST00000492671 SYNJ1O43426 1573 aa21.26■□□□□ 0.99
TRAF3IP2-210ENST00000492671 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
TRAF3IP2-210ENST00000492671 GAPVD1Q14C86 1478 aa21.22■□□□□ 0.99
TRAF3IP2-210ENST00000492671 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
TRAF3IP2-210ENST00000492671 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
TRAF3IP2-210ENST00000492671 ABCA10Q8WWZ4 1543 aa21.21■□□□□ 0.99
TRAF3IP2-210ENST00000492671 TOP2BQ02880 1626 aa21.2■□□□□ 0.98
TRAF3IP2-210ENST00000492671 ABCA5Q8WWZ7 1642 aa21.2■□□□□ 0.98
TRAF3IP2-210ENST00000492671 CHMP7Q8WUX9 453 aaPredicted RBP21.2■□□□□ 0.98
TRAF3IP2-210ENST00000492671 MAGI1Q96QZ7 1491 aaPredicted RBP21.19■□□□□ 0.98
TRAF3IP2-210ENST00000492671 CYB5RLQ6IPT4 315 aa21.16■□□□□ 0.98
TRAF3IP2-210ENST00000492671 SYNJ2O15056 1496 aa21.14■□□□□ 0.98
TRAF3IP2-210ENST00000492671 CLASP1Q7Z460 1538 aa21.13■□□□□ 0.97
TRAF3IP2-210ENST00000492671 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
TRAF3IP2-210ENST00000492671 ADAMTS12P58397 1594 aa21.03■□□□□ 0.96
TRAF3IP2-210ENST00000492671 GRIN2AQ12879 1464 aa20.99■□□□□ 0.95
TRAF3IP2-210ENST00000492671 CEP170Q5SW79 1584 aa20.96■□□□□ 0.95
TRAF3IP2-210ENST00000492671 ERCC6L2Q5T890 1561 aa20.93■□□□□ 0.94
TRAF3IP2-210ENST00000492671 FHAD1B1AJZ9 1412 aa20.93■□□□□ 0.94
TRAF3IP2-210ENST00000492671 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
TRAF3IP2-210ENST00000492671 NUP160Q12769 1436 aa20.88■□□□□ 0.93
TRAF3IP2-210ENST00000492671 TRHP20396 242 aaPredicted RBP20.85■□□□□ 0.93
TRAF3IP2-210ENST00000492671 SHROOM2Q13796 1616 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms