RNA–Protein interactions for RNA: ENST00000491646.1

CLASP1-214, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 2

Gene CLASP1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-214ENST00000491646 AEBP2Q6ZN18 517 aaPredicted RBP23.44■■□□□ 1.34
CLASP1-214ENST00000491646 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
CLASP1-214ENST00000491646 CHIC1Q5VXU3 224 aa22.14■■□□□ 1.13
CLASP1-214ENST00000491646 ABCC9O60706 1549 aa20.54■□□□□ 0.88
CLASP1-214ENST00000491646 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
CLASP1-214ENST00000491646 SENP3Q9H4L4 574 aaPredicted RBP19.98■□□□□ 0.79
CLASP1-214ENST00000491646 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
CLASP1-214ENST00000491646 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
CLASP1-214ENST00000491646 RB1CC1Q8TDY2 1594 aa19.51■□□□□ 0.71
CLASP1-214ENST00000491646 NACADO15069 1562 aa19.36■□□□□ 0.69
CLASP1-214ENST00000491646 UNC13AQ9UPW8 1703 aa19.31■□□□□ 0.68
CLASP1-214ENST00000491646 BICRAQ9NZM4 1560 aa19.09■□□□□ 0.65
CLASP1-214ENST00000491646 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.64
CLASP1-214ENST00000491646 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
CLASP1-214ENST00000491646 DCAF8L2P0C7V8 631 aa19.03■□□□□ 0.64
CLASP1-214ENST00000491646 ZCCHC6Q5VYS8 1495 aaKnown RBP18.79■□□□□ 0.6
CLASP1-214ENST00000491646 DCAF1Q9Y4B6 1507 aa18.78■□□□□ 0.6
CLASP1-214ENST00000491646 SHROOM4Q9ULL8 1493 aa18.67■□□□□ 0.58
CLASP1-214ENST00000491646 FOXD1Q16676 465 aa18.67■□□□□ 0.58
CLASP1-214ENST00000491646 CC2D2AQ9P2K1 1620 aa18.63■□□□□ 0.57
CLASP1-214ENST00000491646 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
CLASP1-214ENST00000491646 EIF4G1Q04637 1599 aaKnown RBP18.54■□□□□ 0.56
CLASP1-214ENST00000491646 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
CLASP1-214ENST00000491646 DNAJC5Q9H3Z4 198 aa17.95■□□□□ 0.46
CLASP1-214ENST00000491646 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
CLASP1-214ENST00000491646 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
CLASP1-214ENST00000491646 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
CLASP1-214ENST00000491646 CUX2O14529 1486 aa17.76■□□□□ 0.43
CLASP1-214ENST00000491646 HMGXB3Q12766 1538 aa17.73■□□□□ 0.43
CLASP1-214ENST00000491646 SMARCA2P51531 1590 aa17.71■□□□□ 0.43
CLASP1-214ENST00000491646 NESP48681 1621 aa17.67■□□□□ 0.42
CLASP1-214ENST00000491646 ERCC6Q03468 1493 aa17.66■□□□□ 0.42
CLASP1-214ENST00000491646 PEG3Q9GZU2 1588 aa17.64■□□□□ 0.41
CLASP1-214ENST00000491646 PLPPR3Q6T4P5 718 aa17.62■□□□□ 0.41
CLASP1-214ENST00000491646 BAZ1AQ9NRL2 1556 aaPredicted RBP17.61■□□□□ 0.41
CLASP1-214ENST00000491646 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
CLASP1-214ENST00000491646 BAZ1BQ9UIG0 1483 aaKnown RBP17.56■□□□□ 0.4
CLASP1-214ENST00000491646 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
CLASP1-214ENST00000491646 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.39
CLASP1-214ENST00000491646 LAMC3Q9Y6N6 1575 aa17.5■□□□□ 0.39
CLASP1-214ENST00000491646 MSH5O43196 834 aa17.48■□□□□ 0.39
CLASP1-214ENST00000491646 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
CLASP1-214ENST00000491646 PIAS4Q8N2W9 510 aaPredicted RBP17.37■□□□□ 0.37
CLASP1-214ENST00000491646 WIZO95785 1651 aa17.35■□□□□ 0.37
CLASP1-214ENST00000491646 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
CLASP1-214ENST00000491646 ADRA2BP18089 450 aa17.31■□□□□ 0.36
CLASP1-214ENST00000491646 CADPSQ9ULU8 1353 aa17.28■□□□□ 0.36
CLASP1-214ENST00000491646 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
CLASP1-214ENST00000491646 WDR62O43379 1518 aa17.24■□□□□ 0.35
CLASP1-214ENST00000491646 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
CLASP1-214ENST00000491646 CFTRP13569 1480 aa17.1■□□□□ 0.33
CLASP1-214ENST00000491646 CEP164Q9UPV0 1460 aa17.1■□□□□ 0.33
CLASP1-214ENST00000491646 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
CLASP1-214ENST00000491646 RSF1Q96T23 1441 aaPredicted RBP17.07■□□□□ 0.32
CLASP1-214ENST00000491646 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
CLASP1-214ENST00000491646 TOP2AP11388 1531 aaKnown RBP17.04■□□□□ 0.32
CLASP1-214ENST00000491646 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
CLASP1-214ENST00000491646 TRIM41Q8WV44 630 aa16.98■□□□□ 0.31
CLASP1-214ENST00000491646 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
CLASP1-214ENST00000491646 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
CLASP1-214ENST00000491646 ZNF608Q9ULD9 1512 aaPredicted RBP16.82■□□□□ 0.28
CLASP1-214ENST00000491646 RIMBP3CA6NJZ7 1639 aa16.81■□□□□ 0.28
CLASP1-214ENST00000491646 RIMBP3BA6NNM3 1639 aa16.81■□□□□ 0.28
CLASP1-214ENST00000491646 RIMBP3Q9UFD9 1639 aa16.81■□□□□ 0.28
CLASP1-214ENST00000491646 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
CLASP1-214ENST00000491646 IFT140Q96RY7 1462 aa16.76■□□□□ 0.27
CLASP1-214ENST00000491646 EIF4G3O43432 1585 aaKnown RBP16.73■□□□□ 0.27
CLASP1-214ENST00000491646 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
CLASP1-214ENST00000491646 CHD1O14646 1710 aa16.71■□□□□ 0.27
CLASP1-214ENST00000491646 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
CLASP1-214ENST00000491646 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
CLASP1-214ENST00000491646 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
CLASP1-214ENST00000491646 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.257e-9■■■■□ 20.6
CLASP1-214ENST00000491646 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
CLASP1-214ENST00000491646 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
CLASP1-214ENST00000491646 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
CLASP1-214ENST00000491646 CYB5RLQ6IPT4 315 aa16.48■□□□□ 0.23
CLASP1-214ENST00000491646 WDR97A6NE52 1622 aa16.48■□□□□ 0.23
CLASP1-214ENST00000491646 CUX1P39880 1505 aa16.47■□□□□ 0.23
CLASP1-214ENST00000491646 SOGA1O94964 1423 aa16.46■□□□□ 0.23
CLASP1-214ENST00000491646 CLASP1Q7Z460 1538 aa16.46■□□□□ 0.23
CLASP1-214ENST00000491646 TDRD9Q8NDG6 1382 aaKnown RBP16.46■□□□□ 0.23
CLASP1-214ENST00000491646 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
CLASP1-214ENST00000491646 SNAPC4Q5SXM2 1469 aa16.42■□□□□ 0.22
CLASP1-214ENST00000491646 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
CLASP1-214ENST00000491646 FBLN2P98095 1184 aa16.4■□□□□ 0.22
CLASP1-214ENST00000491646 MAGI1Q96QZ7 1491 aaPredicted RBP16.38■□□□□ 0.21
CLASP1-214ENST00000491646 SYNJ1O43426 1573 aa16.35■□□□□ 0.21
CLASP1-214ENST00000491646 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
CLASP1-214ENST00000491646 SYNJ2O15056 1496 aa16.33■□□□□ 0.2
CLASP1-214ENST00000491646 ABCA5Q8WWZ7 1642 aa16.33■□□□□ 0.2
CLASP1-214ENST00000491646 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
CLASP1-214ENST00000491646 CHMP7Q8WUX9 453 aaPredicted RBP16.28■□□□□ 0.2
CLASP1-214ENST00000491646 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
CLASP1-214ENST00000491646 ABCA10Q8WWZ4 1543 aa16.27■□□□□ 0.2
CLASP1-214ENST00000491646 ERCC6L2Q5T890 1561 aa16.22■□□□□ 0.19
CLASP1-214ENST00000491646 BIVM-ERCC5R4GMW8 1640 aa16.2■□□□□ 0.18
CLASP1-214ENST00000491646 ADAMTS12P58397 1594 aa16.17■□□□□ 0.18
CLASP1-214ENST00000491646 CEP170Q5SW79 1584 aa16.17■□□□□ 0.18
CLASP1-214ENST00000491646 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms