RNA–Protein interactions for RNA: ENST00000491325.5

GTF2I-211, Transcript of general transcription factor IIi, humanhuman

TSL 4

Gene GTF2I, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-211ENST00000491325 NISCHQ9Y2I1 1504 aa16.63■□□□□ 0.25
GTF2I-211ENST00000491325 AEBP2Q6ZN18 517 aaPredicted RBP15.61■□□□□ 0.09
GTF2I-211ENST00000491325 ABCC9O60706 1549 aa15.42■□□□□ 0.06
GTF2I-211ENST00000491325 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
GTF2I-211ENST00000491325 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
GTF2I-211ENST00000491325 RB1CC1Q8TDY2 1594 aa14.58□□□□□ -0.08
GTF2I-211ENST00000491325 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
GTF2I-211ENST00000491325 NACADO15069 1562 aa14.38□□□□□ -0.11
GTF2I-211ENST00000491325 UNC13AQ9UPW8 1703 aa14.3□□□□□ -0.12
GTF2I-211ENST00000491325 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
GTF2I-211ENST00000491325 BICRAQ9NZM4 1560 aa14.13□□□□□ -0.15
GTF2I-211ENST00000491325 DCAF8L2P0C7V8 631 aa14.1□□□□□ -0.15
GTF2I-211ENST00000491325 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
GTF2I-211ENST00000491325 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
GTF2I-211ENST00000491325 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
GTF2I-211ENST00000491325 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
GTF2I-211ENST00000491325 EIF4G1Q04637 1599 aaKnown RBP13.83□□□□□ -0.19
GTF2I-211ENST00000491325 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
GTF2I-211ENST00000491325 SCRIBQ14160 1630 aa13.75□□□□□ -0.21
GTF2I-211ENST00000491325 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
GTF2I-211ENST00000491325 ZCCHC6Q5VYS8 1495 aaKnown RBP13.73□□□□□ -0.21
GTF2I-211ENST00000491325 CUX2O14529 1486 aa13.48□□□□□ -0.25
GTF2I-211ENST00000491325 ERCC6Q03468 1493 aa13.37□□□□□ -0.27
GTF2I-211ENST00000491325 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
GTF2I-211ENST00000491325 SENP3Q9H4L4 574 aaPredicted RBP13.21□□□□□ -0.29
GTF2I-211ENST00000491325 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
GTF2I-211ENST00000491325 THOC2Q8NI27 1593 aaKnown RBP13.15□□□□□ -0.3
GTF2I-211ENST00000491325 ATAD2BQ9ULI0 1458 aa13.14□□□□□ -0.31
GTF2I-211ENST00000491325 SMARCA2P51531 1590 aa13.14□□□□□ -0.31
GTF2I-211ENST00000491325 NESP48681 1621 aa13.13□□□□□ -0.31
GTF2I-211ENST00000491325 SMARCA4P51532 1647 aa13.1□□□□□ -0.31
GTF2I-211ENST00000491325 PHF23Q9BUL5 403 aaPredicted RBP13.09□□□□□ -0.31
GTF2I-211ENST00000491325 LAMC3Q9Y6N6 1575 aa13.05□□□□□ -0.32
GTF2I-211ENST00000491325 KIF21AQ7Z4S6 1674 aa13.05□□□□□ -0.32
GTF2I-211ENST00000491325 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
GTF2I-211ENST00000491325 BAZ1BQ9UIG0 1483 aaKnown RBP13.03□□□□□ -0.32
GTF2I-211ENST00000491325 BAZ1AQ9NRL2 1556 aaPredicted RBP12.97□□□□□ -0.33
GTF2I-211ENST00000491325 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.33
GTF2I-211ENST00000491325 PDS5BQ9NTI5 1447 aa12.94□□□□□ -0.34
GTF2I-211ENST00000491325 MRC2Q9UBG0 1479 aa12.87□□□□□ -0.35
GTF2I-211ENST00000491325 WDR62O43379 1518 aa12.87□□□□□ -0.35
GTF2I-211ENST00000491325 MROH2BQ7Z745 1585 aa12.79□□□□□ -0.36
GTF2I-211ENST00000491325 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
GTF2I-211ENST00000491325 CEP164Q9UPV0 1460 aa12.76□□□□□ -0.37
GTF2I-211ENST00000491325 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
GTF2I-211ENST00000491325 RIMBP3CA6NJZ7 1639 aa12.69□□□□□ -0.38
GTF2I-211ENST00000491325 RIMBP3BA6NNM3 1639 aa12.69□□□□□ -0.38
GTF2I-211ENST00000491325 RIMBP3Q9UFD9 1639 aa12.69□□□□□ -0.38
GTF2I-211ENST00000491325 FANCD2Q9BXW9 1451 aa12.68□□□□□ -0.38
GTF2I-211ENST00000491325 WIZO95785 1651 aa12.67□□□□□ -0.38
GTF2I-211ENST00000491325 PRDM2Q13029 1718 aa12.6□□□□□ -0.39
GTF2I-211ENST00000491325 CFTRP13569 1480 aa12.59□□□□□ -0.39
GTF2I-211ENST00000491325 ARHGEF11O15085 1522 aa12.59□□□□□ -0.39
GTF2I-211ENST00000491325 URB2Q14146 1524 aaKnown RBP12.59□□□□□ -0.39
GTF2I-211ENST00000491325 IFT140Q96RY7 1462 aa12.5□□□□□ -0.41
GTF2I-211ENST00000491325 TOP2AP11388 1531 aaKnown RBP12.49□□□□□ -0.41
GTF2I-211ENST00000491325 ZNF608Q9ULD9 1512 aaPredicted RBP12.48□□□□□ -0.41
GTF2I-211ENST00000491325 CHD1O14646 1710 aa12.48□□□□□ -0.41
GTF2I-211ENST00000491325 EIF4G3O43432 1585 aaKnown RBP12.47□□□□□ -0.41
GTF2I-211ENST00000491325 FOXD1Q16676 465 aa12.45□□□□□ -0.42
GTF2I-211ENST00000491325 ARAP1Q96P48 1450 aa12.43□□□□□ -0.42
GTF2I-211ENST00000491325 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
GTF2I-211ENST00000491325 CYB5RLQ6IPT4 315 aa12.43□□□□□ -0.42
GTF2I-211ENST00000491325 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
GTF2I-211ENST00000491325 RSF1Q96T23 1441 aaPredicted RBP12.38□□□□□ -0.43
GTF2I-211ENST00000491325 ABCC8Q09428 1581 aa12.37□□□□□ -0.43
GTF2I-211ENST00000491325 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
GTF2I-211ENST00000491325 TARBP1Q13395 1621 aaKnown RBP12.35□□□□□ -0.43
GTF2I-211ENST00000491325 AQRO60306 1485 aaKnown RBP eCLIP12.3□□□□□ -0.44
GTF2I-211ENST00000491325 CCDC88BA6NC98 1476 aa12.28□□□□□ -0.44
GTF2I-211ENST00000491325 FBLN2P98095 1184 aa12.28□□□□□ -0.44
GTF2I-211ENST00000491325 CLASP1Q7Z460 1538 aa12.27□□□□□ -0.44
GTF2I-211ENST00000491325 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
GTF2I-211ENST00000491325 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
GTF2I-211ENST00000491325 WDR97A6NE52 1622 aa12.25□□□□□ -0.45
GTF2I-211ENST00000491325 SNAPC4Q5SXM2 1469 aa12.21□□□□□ -0.45
GTF2I-211ENST00000491325 MAGI1Q96QZ7 1491 aaPredicted RBP12.19□□□□□ -0.46
GTF2I-211ENST00000491325 RAD54L2Q9Y4B4 1467 aa12.18□□□□□ -0.46
GTF2I-211ENST00000491325 SOGA1O94964 1423 aa12.16□□□□□ -0.46
GTF2I-211ENST00000491325 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
GTF2I-211ENST00000491325 PBRM1Q86U86 1689 aa12.15□□□□□ -0.46
GTF2I-211ENST00000491325 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
GTF2I-211ENST00000491325 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
GTF2I-211ENST00000491325 CHMP7Q8WUX9 453 aaPredicted RBP12.14□□□□□ -0.47
GTF2I-211ENST00000491325 GRIN2BQ13224 1484 aa12.13□□□□□ -0.47
GTF2I-211ENST00000491325 FGD5Q6ZNL6 1462 aa12.13□□□□□ -0.47
GTF2I-211ENST00000491325 KIF13AQ9H1H9 1805 aa12.05□□□□□ -0.48
GTF2I-211ENST00000491325 CUX1P39880 1505 aa12.05□□□□□ -0.48
GTF2I-211ENST00000491325 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
GTF2I-211ENST00000491325 ERCC6L2Q5T890 1561 aa12.02□□□□□ -0.49
GTF2I-211ENST00000491325 CEP170Q5SW79 1584 aa12□□□□□ -0.49
GTF2I-211ENST00000491325 SHROOM2Q13796 1616 aa11.98□□□□□ -0.49
GTF2I-211ENST00000491325 GRIN2AQ12879 1464 aa11.98□□□□□ -0.49
GTF2I-211ENST00000491325 ADAMTS12P58397 1594 aa11.97□□□□□ -0.49
GTF2I-211ENST00000491325 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
GTF2I-211ENST00000491325 NUP160Q12769 1436 aa11.94□□□□□ -0.5
GTF2I-211ENST00000491325 POTEDQ86YR6 584 aa11.93□□□□□ -0.5
GTF2I-211ENST00000491325 KDM6BO15054 1643 aa11.89□□□□□ -0.51
GTF2I-211ENST00000491325 DIP2BQ9P265 1576 aa11.88□□□□□ -0.51
GTF2I-211ENST00000491325 ABCC10Q5T3U5 1492 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms