RNA–Protein interactions for RNA: ENST00000489140.1

ATP13A4-210, Transcript of ATPase 13A4, humanhuman

TSL 4

Gene ATP13A4, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4-210ENST00000489140 NISCHQ9Y2I1 1504 aa16.53■□□□□ 0.24
ATP13A4-210ENST00000489140 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
ATP13A4-210ENST00000489140 ABCC9O60706 1549 aa14.69□□□□□ -0.06
ATP13A4-210ENST00000489140 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
ATP13A4-210ENST00000489140 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
ATP13A4-210ENST00000489140 NACADO15069 1562 aa13.99□□□□□ -0.17
ATP13A4-210ENST00000489140 MYO15BQ96JP2 1530 aa13.84□□□□□ -0.19
ATP13A4-210ENST00000489140 DCAF8L2P0C7V8 631 aa13.82□□□□□ -0.2
ATP13A4-210ENST00000489140 UNC13AQ9UPW8 1703 aa13.79□□□□□ -0.2
ATP13A4-210ENST00000489140 DNAJC5BQ9UF47 199 aa13.71□□□□□ -0.21
ATP13A4-210ENST00000489140 ZCCHC6Q5VYS8 1495 aaKnown RBP13.71□□□□□ -0.21
ATP13A4-210ENST00000489140 DCAF1Q9Y4B6 1507 aa13.68□□□□□ -0.22
ATP13A4-210ENST00000489140 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
ATP13A4-210ENST00000489140 PABPN1Q86U42 306 aaKnown RBP eCLIP13.66□□□□□ -0.22
ATP13A4-210ENST00000489140 CHIC1Q5VXU3 224 aa13.5□□□□□ -0.25
ATP13A4-210ENST00000489140 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
ATP13A4-210ENST00000489140 SCRIBQ14160 1630 aa13.47□□□□□ -0.25
ATP13A4-210ENST00000489140 CC2D2AQ9P2K1 1620 aa13.31□□□□□ -0.28
ATP13A4-210ENST00000489140 EIF4G1Q04637 1599 aaKnown RBP13.3□□□□□ -0.28
ATP13A4-210ENST00000489140 CECR2Q9BXF3 1484 aa13.23□□□□□ -0.29
ATP13A4-210ENST00000489140 NCAPD3P42695 1498 aa12.9□□□□□ -0.34
ATP13A4-210ENST00000489140 SMARCA4P51532 1647 aa12.88□□□□□ -0.35
ATP13A4-210ENST00000489140 ATAD2BQ9ULI0 1458 aa12.85□□□□□ -0.35
ATP13A4-210ENST00000489140 SMARCA2P51531 1590 aa12.84□□□□□ -0.35
ATP13A4-210ENST00000489140 HMGXB3Q12766 1538 aa12.83□□□□□ -0.36
ATP13A4-210ENST00000489140 BAZ1AQ9NRL2 1556 aaPredicted RBP12.82□□□□□ -0.36
ATP13A4-210ENST00000489140 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
ATP13A4-210ENST00000489140 MROH2BQ7Z745 1585 aa12.73□□□□□ -0.37
ATP13A4-210ENST00000489140 BAZ1BQ9UIG0 1483 aaKnown RBP12.72□□□□□ -0.37
ATP13A4-210ENST00000489140 ERCC6Q03468 1493 aa12.67□□□□□ -0.38
ATP13A4-210ENST00000489140 CUX2O14529 1486 aa12.66□□□□□ -0.38
ATP13A4-210ENST00000489140 NESP48681 1621 aa12.66□□□□□ -0.38
ATP13A4-210ENST00000489140 LAMC3Q9Y6N6 1575 aa12.61□□□□□ -0.39
ATP13A4-210ENST00000489140 WIZO95785 1651 aa12.6□□□□□ -0.39
ATP13A4-210ENST00000489140 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
ATP13A4-210ENST00000489140 THOC2Q8NI27 1593 aaKnown RBP12.55□□□□□ -0.4
ATP13A4-210ENST00000489140 KIF21AQ7Z4S6 1674 aa12.54□□□□□ -0.4
ATP13A4-210ENST00000489140 PDS5BQ9NTI5 1447 aa12.5□□□□□ -0.41
ATP13A4-210ENST00000489140 CADPSQ9ULU8 1353 aa12.48□□□□□ -0.41
ATP13A4-210ENST00000489140 RSF1Q96T23 1441 aaPredicted RBP12.47□□□□□ -0.41
ATP13A4-210ENST00000489140 TOP2AP11388 1531 aaKnown RBP12.43□□□□□ -0.42
ATP13A4-210ENST00000489140 MRC2Q9UBG0 1479 aa12.4□□□□□ -0.43
ATP13A4-210ENST00000489140 WDR62O43379 1518 aa12.39□□□□□ -0.43
ATP13A4-210ENST00000489140 CFTRP13569 1480 aa12.38□□□□□ -0.43
ATP13A4-210ENST00000489140 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
ATP13A4-210ENST00000489140 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
ATP13A4-210ENST00000489140 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
ATP13A4-210ENST00000489140 CCDC88BA6NC98 1476 aa12.27□□□□□ -0.44
ATP13A4-210ENST00000489140 URB2Q14146 1524 aaKnown RBP12.25□□□□□ -0.45
ATP13A4-210ENST00000489140 TOPBP1Q92547 1522 aa12.13□□□□□ -0.47
ATP13A4-210ENST00000489140 SENP3Q9H4L4 574 aaPredicted RBP12.13□□□□□ -0.47
ATP13A4-210ENST00000489140 ABCC8Q09428 1581 aa12.12□□□□□ -0.47
ATP13A4-210ENST00000489140 DNMBPQ6XZF7 1577 aa12.11□□□□□ -0.47
ATP13A4-210ENST00000489140 IFT140Q96RY7 1462 aa12.11□□□□□ -0.47
ATP13A4-210ENST00000489140 ZNF608Q9ULD9 1512 aaPredicted RBP12.08□□□□□ -0.48
ATP13A4-210ENST00000489140 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
ATP13A4-210ENST00000489140 TARBP1Q13395 1621 aaKnown RBP12.05□□□□□ -0.48
ATP13A4-210ENST00000489140 EIF4G3O43432 1585 aaKnown RBP12.05□□□□□ -0.48
ATP13A4-210ENST00000489140 PHF23Q9BUL5 403 aaPredicted RBP12.02□□□□□ -0.49
ATP13A4-210ENST00000489140 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.49
ATP13A4-210ENST00000489140 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
ATP13A4-210ENST00000489140 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.49
ATP13A4-210ENST00000489140 CHD1O14646 1710 aa11.96□□□□□ -0.49
ATP13A4-210ENST00000489140 WDR97A6NE52 1622 aa11.95□□□□□ -0.5
ATP13A4-210ENST00000489140 CUX1P39880 1505 aa11.95□□□□□ -0.5
ATP13A4-210ENST00000489140 RAD54L2Q9Y4B4 1467 aa11.95□□□□□ -0.5
ATP13A4-210ENST00000489140 RIMBP3CA6NJZ7 1639 aa11.94□□□□□ -0.5
ATP13A4-210ENST00000489140 RIMBP3BA6NNM3 1639 aa11.94□□□□□ -0.5
ATP13A4-210ENST00000489140 RIMBP3Q9UFD9 1639 aa11.94□□□□□ -0.5
ATP13A4-210ENST00000489140 FGD5Q6ZNL6 1462 aa11.94□□□□□ -0.5
ATP13A4-210ENST00000489140 SOGA1O94964 1423 aa11.94□□□□□ -0.5
ATP13A4-210ENST00000489140 SUPT5HO00267 1087 aaKnown RBP11.91□□□□□ -0.5
ATP13A4-210ENST00000489140 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
ATP13A4-210ENST00000489140 ARHGEF11O15085 1522 aa11.89□□□□□ -0.51
ATP13A4-210ENST00000489140 PBRM1Q86U86 1689 aa11.85□□□□□ -0.51
ATP13A4-210ENST00000489140 SNAPC4Q5SXM2 1469 aa11.85□□□□□ -0.51
ATP13A4-210ENST00000489140 GRIN2BQ13224 1484 aa11.84□□□□□ -0.51
ATP13A4-210ENST00000489140 MAGI1Q96QZ7 1491 aaPredicted RBP11.84□□□□□ -0.51
ATP13A4-210ENST00000489140 FBLN2P98095 1184 aa11.83□□□□□ -0.52
ATP13A4-210ENST00000489140 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
ATP13A4-210ENST00000489140 ABCA10Q8WWZ4 1543 aa11.82□□□□□ -0.52
ATP13A4-210ENST00000489140 BIVM-ERCC5R4GMW8 1640 aa11.82□□□□□ -0.52
ATP13A4-210ENST00000489140 GAPVD1Q14C86 1478 aa11.81□□□□□ -0.52
ATP13A4-210ENST00000489140 CLASP1Q7Z460 1538 aa11.81□□□□□ -0.52
ATP13A4-210ENST00000489140 TOP2BQ02880 1626 aa11.8□□□□□ -0.52
ATP13A4-210ENST00000489140 SYNJ2O15056 1496 aa11.8□□□□□ -0.52
ATP13A4-210ENST00000489140 SYNJ1O43426 1573 aa11.79□□□□□ -0.52
ATP13A4-210ENST00000489140 CHMP7Q8WUX9 453 aaPredicted RBP11.78□□□□□ -0.52
ATP13A4-210ENST00000489140 ARAP1Q96P48 1450 aa11.77□□□□□ -0.52
ATP13A4-210ENST00000489140 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.53
ATP13A4-210ENST00000489140 CYB5RLQ6IPT4 315 aa11.76□□□□□ -0.53
ATP13A4-210ENST00000489140 ADAMTS12P58397 1594 aa11.71□□□□□ -0.54
ATP13A4-210ENST00000489140 GRIN2AQ12879 1464 aa11.69□□□□□ -0.54
ATP13A4-210ENST00000489140 ERICH3Q5RHP9 1530 aa11.68□□□□□ -0.54
ATP13A4-210ENST00000489140 CEP170Q5SW79 1584 aa11.67□□□□□ -0.54
ATP13A4-210ENST00000489140 FHAD1B1AJZ9 1412 aa11.66□□□□□ -0.54
ATP13A4-210ENST00000489140 NUP160Q12769 1436 aa11.66□□□□□ -0.54
ATP13A4-210ENST00000489140 SHROOM2Q13796 1616 aa11.64□□□□□ -0.55
ATP13A4-210ENST00000489140 ERCC6L2Q5T890 1561 aa11.62□□□□□ -0.55
ATP13A4-210ENST00000489140 TRHP20396 242 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms