RNA–Protein interactions for RNA: ENST00000489113.2

GAPDHP47-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 47, humanhuman

BASIC

Gene GAPDHP47, Length 999 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP47-201ENST00000489113 NISCHQ9Y2I1 1504 aa21.5■■□□□ 1.03
GAPDHP47-201ENST00000489113 ABCC9O60706 1549 aa19.29■□□□□ 0.68
GAPDHP47-201ENST00000489113 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
GAPDHP47-201ENST00000489113 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
GAPDHP47-201ENST00000489113 DCAF8L2P0C7V8 631 aa18.47■□□□□ 0.55
GAPDHP47-201ENST00000489113 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
GAPDHP47-201ENST00000489113 NACADO15069 1562 aa18.19■□□□□ 0.5
GAPDHP47-201ENST00000489113 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
GAPDHP47-201ENST00000489113 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
GAPDHP47-201ENST00000489113 DNAJC5BQ9UF47 199 aa18.05■□□□□ 0.48
GAPDHP47-201ENST00000489113 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
GAPDHP47-201ENST00000489113 ZCCHC6Q5VYS8 1495 aaKnown RBP17.8■□□□□ 0.44
GAPDHP47-201ENST00000489113 DCAF1Q9Y4B6 1507 aa17.72■□□□□ 0.43
GAPDHP47-201ENST00000489113 BICRAQ9NZM4 1560 aa17.66■□□□□ 0.42
GAPDHP47-201ENST00000489113 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
GAPDHP47-201ENST00000489113 SCRIBQ14160 1630 aa17.55■□□□□ 0.4
GAPDHP47-201ENST00000489113 SHROOM4Q9ULL8 1493 aa17.51■□□□□ 0.39
GAPDHP47-201ENST00000489113 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
GAPDHP47-201ENST00000489113 CC2D2AQ9P2K1 1620 aa17.31■□□□□ 0.36
GAPDHP47-201ENST00000489113 EIF4G1Q04637 1599 aaKnown RBP17.3■□□□□ 0.36
GAPDHP47-201ENST00000489113 NCAPD3P42695 1498 aa16.84■□□□□ 0.29
GAPDHP47-201ENST00000489113 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
GAPDHP47-201ENST00000489113 SMARCA2P51531 1590 aa16.73■□□□□ 0.27
GAPDHP47-201ENST00000489113 ERCC6Q03468 1493 aa16.72■□□□□ 0.27
GAPDHP47-201ENST00000489113 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
GAPDHP47-201ENST00000489113 SMARCA4P51532 1647 aa16.7■□□□□ 0.26
GAPDHP47-201ENST00000489113 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
GAPDHP47-201ENST00000489113 HMGXB3Q12766 1538 aa16.64■□□□□ 0.25
GAPDHP47-201ENST00000489113 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
GAPDHP47-201ENST00000489113 MROH2BQ7Z745 1585 aa16.56■□□□□ 0.24
GAPDHP47-201ENST00000489113 CUX2O14529 1486 aa16.56■□□□□ 0.24
GAPDHP47-201ENST00000489113 NESP48681 1621 aa16.53■□□□□ 0.24
GAPDHP47-201ENST00000489113 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
GAPDHP47-201ENST00000489113 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
GAPDHP47-201ENST00000489113 CADPSQ9ULU8 1353 aa16.39■□□□□ 0.21
GAPDHP47-201ENST00000489113 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
GAPDHP47-201ENST00000489113 RSF1Q96T23 1441 aaPredicted RBP16.31■□□□□ 0.2
GAPDHP47-201ENST00000489113 WIZO95785 1651 aa16.3■□□□□ 0.2
GAPDHP47-201ENST00000489113 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
GAPDHP47-201ENST00000489113 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
GAPDHP47-201ENST00000489113 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
GAPDHP47-201ENST00000489113 FANCD2Q9BXW9 1451 aa16.17■□□□□ 0.18
GAPDHP47-201ENST00000489113 KIF21AQ7Z4S6 1674 aa16.16■□□□□ 0.18
GAPDHP47-201ENST00000489113 CFTRP13569 1480 aa16.16■□□□□ 0.18
GAPDHP47-201ENST00000489113 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
GAPDHP47-201ENST00000489113 WDR62O43379 1518 aa16.09■□□□□ 0.17
GAPDHP47-201ENST00000489113 CCDC88BA6NC98 1476 aa16.04■□□□□ 0.16
GAPDHP47-201ENST00000489113 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
GAPDHP47-201ENST00000489113 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
GAPDHP47-201ENST00000489113 URB2Q14146 1524 aaKnown RBP15.97■□□□□ 0.15
GAPDHP47-201ENST00000489113 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
GAPDHP47-201ENST00000489113 IFT140Q96RY7 1462 aa15.86■□□□□ 0.13
GAPDHP47-201ENST00000489113 SUPT5HO00267 1087 aaKnown RBP15.86■□□□□ 0.13
GAPDHP47-201ENST00000489113 SENP3Q9H4L4 574 aaPredicted RBP15.86■□□□□ 0.13
GAPDHP47-201ENST00000489113 ABCC8Q09428 1581 aa15.86■□□□□ 0.13
GAPDHP47-201ENST00000489113 TOPBP1Q92547 1522 aa15.83■□□□□ 0.12
GAPDHP47-201ENST00000489113 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
GAPDHP47-201ENST00000489113 FBLN2P98095 1184 aa15.79■□□□□ 0.12
GAPDHP47-201ENST00000489113 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
GAPDHP47-201ENST00000489113 AQRO60306 1485 aaKnown RBP eCLIP15.72■□□□□ 0.11
GAPDHP47-201ENST00000489113 SOGA1O94964 1423 aa15.72■□□□□ 0.11
GAPDHP47-201ENST00000489113 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
GAPDHP47-201ENST00000489113 TDRD9Q8NDG6 1382 aaKnown RBP15.69■□□□□ 0.1
GAPDHP47-201ENST00000489113 POLA1P09884 1462 aaPredicted RBP15.67■□□□□ 0.1
GAPDHP47-201ENST00000489113 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
GAPDHP47-201ENST00000489113 CHMP7Q8WUX9 453 aaPredicted RBP15.65■□□□□ 0.1
GAPDHP47-201ENST00000489113 CYB5RLQ6IPT4 315 aa15.63■□□□□ 0.09
GAPDHP47-201ENST00000489113 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
GAPDHP47-201ENST00000489113 FGD5Q6ZNL6 1462 aa15.6■□□□□ 0.09
GAPDHP47-201ENST00000489113 TARBP1Q13395 1621 aaKnown RBP15.58■□□□□ 0.09
GAPDHP47-201ENST00000489113 CUX1P39880 1505 aa15.55■□□□□ 0.08
GAPDHP47-201ENST00000489113 ARHGEF11O15085 1522 aa15.54■□□□□ 0.08
GAPDHP47-201ENST00000489113 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.08
GAPDHP47-201ENST00000489113 GRIN2BQ13224 1484 aa15.52■□□□□ 0.07
GAPDHP47-201ENST00000489113 RIMBP3CA6NJZ7 1639 aa15.51■□□□□ 0.07
GAPDHP47-201ENST00000489113 RIMBP3BA6NNM3 1639 aa15.51■□□□□ 0.07
GAPDHP47-201ENST00000489113 RIMBP3Q9UFD9 1639 aa15.51■□□□□ 0.07
GAPDHP47-201ENST00000489113 TRHP20396 242 aaPredicted RBP15.5■□□□□ 0.07
GAPDHP47-201ENST00000489113 GAPVD1Q14C86 1478 aa15.48■□□□□ 0.07
GAPDHP47-201ENST00000489113 MAGI1Q96QZ7 1491 aaPredicted RBP15.47■□□□□ 0.07
GAPDHP47-201ENST00000489113 WRNQ14191 1432 aaPredicted RBP eCLIP15.47■□□□□ 0.07
GAPDHP47-201ENST00000489113 WDR97A6NE52 1622 aa15.45■□□□□ 0.06
GAPDHP47-201ENST00000489113 SYNJ2O15056 1496 aa15.44■□□□□ 0.06
GAPDHP47-201ENST00000489113 CHD1O14646 1710 aa15.42■□□□□ 0.06
GAPDHP47-201ENST00000489113 ABCA10Q8WWZ4 1543 aa15.41■□□□□ 0.06
GAPDHP47-201ENST00000489113 SYNJ1O43426 1573 aa15.4■□□□□ 0.06
GAPDHP47-201ENST00000489113 ARAP1Q96P48 1450 aa15.39■□□□□ 0.05
GAPDHP47-201ENST00000489113 CLASP1Q7Z460 1538 aa15.32■□□□□ 0.04
GAPDHP47-201ENST00000489113 FHAD1B1AJZ9 1412 aa15.3■□□□□ 0.04
GAPDHP47-201ENST00000489113 TOP2BQ02880 1626 aa15.29■□□□□ 0.04
GAPDHP47-201ENST00000489113 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
GAPDHP47-201ENST00000489113 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
GAPDHP47-201ENST00000489113 PBRM1Q86U86 1689 aa15.25■□□□□ 0.03
GAPDHP47-201ENST00000489113 BIVM-ERCC5R4GMW8 1640 aa15.22■□□□□ 0.03
GAPDHP47-201ENST00000489113 JPH4Q96JJ6 628 aa15.22■□□□□ 0.03
GAPDHP47-201ENST00000489113 NUP160Q12769 1436 aa15.21■□□□□ 0.03
GAPDHP47-201ENST00000489113 ERICH3Q5RHP9 1530 aa15.21■□□□□ 0.03
GAPDHP47-201ENST00000489113 ADAMTS12P58397 1594 aa15.19■□□□□ 0.02
GAPDHP47-201ENST00000489113 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
GAPDHP47-201ENST00000489113 NPM1P06748 294 aaKnown RBP eCLIP15.16■□□□□ 0.02
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