RNA–Protein interactions for RNA: ENST00000488836.3

RN7SL28P-201, Transcript of RNA, 7SL, cytoplasmic 28, pseudogene, humanhuman

BASIC

Gene RN7SL28P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL28P-201ENST00000488836 NISCHQ9Y2I1 1504 aa21.46■■□□□ 1.03
RN7SL28P-201ENST00000488836 ABCC9O60706 1549 aa19.39■□□□□ 0.69
RN7SL28P-201ENST00000488836 CCDC180Q9P1Z9 1646 aa19.37■□□□□ 0.69
RN7SL28P-201ENST00000488836 RB1CC1Q8TDY2 1594 aa18.49■□□□□ 0.55
RN7SL28P-201ENST00000488836 NACADO15069 1562 aa18.34■□□□□ 0.53
RN7SL28P-201ENST00000488836 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
RN7SL28P-201ENST00000488836 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
RN7SL28P-201ENST00000488836 DCAF8L2P0C7V8 631 aa18.15■□□□□ 0.5
RN7SL28P-201ENST00000488836 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
RN7SL28P-201ENST00000488836 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
RN7SL28P-201ENST00000488836 PABPN1Q86U42 306 aaKnown RBP eCLIP18.01■□□□□ 0.47
RN7SL28P-201ENST00000488836 UNC13AQ9UPW8 1703 aa17.99■□□□□ 0.47
RN7SL28P-201ENST00000488836 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
RN7SL28P-201ENST00000488836 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.44
RN7SL28P-201ENST00000488836 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
RN7SL28P-201ENST00000488836 SHROOM4Q9ULL8 1493 aa17.75■□□□□ 0.43
RN7SL28P-201ENST00000488836 SCRIBQ14160 1630 aa17.56■□□□□ 0.4
RN7SL28P-201ENST00000488836 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
RN7SL28P-201ENST00000488836 CECR2Q9BXF3 1484 aa17.51■□□□□ 0.39
RN7SL28P-201ENST00000488836 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
RN7SL28P-201ENST00000488836 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
RN7SL28P-201ENST00000488836 NCAPD3P42695 1498 aa16.91■□□□□ 0.3
RN7SL28P-201ENST00000488836 CUX2O14529 1486 aa16.85■□□□□ 0.29
RN7SL28P-201ENST00000488836 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
RN7SL28P-201ENST00000488836 ERCC6Q03468 1493 aa16.81■□□□□ 0.28
RN7SL28P-201ENST00000488836 ATAD2BQ9ULI0 1458 aa16.8■□□□□ 0.28
RN7SL28P-201ENST00000488836 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
RN7SL28P-201ENST00000488836 SMARCA4P51532 1647 aa16.77■□□□□ 0.27
RN7SL28P-201ENST00000488836 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
RN7SL28P-201ENST00000488836 BAZ1BQ9UIG0 1483 aaKnown RBP16.67■□□□□ 0.26
RN7SL28P-201ENST00000488836 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
RN7SL28P-201ENST00000488836 NESP48681 1621 aa16.59■□□□□ 0.25
RN7SL28P-201ENST00000488836 LAMC3Q9Y6N6 1575 aa16.57■□□□□ 0.24
RN7SL28P-201ENST00000488836 MROH2BQ7Z745 1585 aa16.49■□□□□ 0.23
RN7SL28P-201ENST00000488836 THOC2Q8NI27 1593 aaKnown RBP16.49■□□□□ 0.23
RN7SL28P-201ENST00000488836 PDS5BQ9NTI5 1447 aa16.49■□□□□ 0.23
RN7SL28P-201ENST00000488836 KIF21AQ7Z4S6 1674 aa16.41■□□□□ 0.22
RN7SL28P-201ENST00000488836 CADPSQ9ULU8 1353 aa16.38■□□□□ 0.21
RN7SL28P-201ENST00000488836 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
RN7SL28P-201ENST00000488836 WIZO95785 1651 aa16.29■□□□□ 0.2
RN7SL28P-201ENST00000488836 WDR62O43379 1518 aa16.28■□□□□ 0.2
RN7SL28P-201ENST00000488836 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
RN7SL28P-201ENST00000488836 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
RN7SL28P-201ENST00000488836 CFTRP13569 1480 aa16.16■□□□□ 0.18
RN7SL28P-201ENST00000488836 TOP2AP11388 1531 aaKnown RBP16.13■□□□□ 0.17
RN7SL28P-201ENST00000488836 RSF1Q96T23 1441 aaPredicted RBP16.12■□□□□ 0.17
RN7SL28P-201ENST00000488836 TRIM41Q8WV44 630 aa16.11■□□□□ 0.17
RN7SL28P-201ENST00000488836 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
RN7SL28P-201ENST00000488836 URB2Q14146 1524 aaKnown RBP16.02■□□□□ 0.15
RN7SL28P-201ENST00000488836 PRDM2Q13029 1718 aa16.02■□□□□ 0.15
RN7SL28P-201ENST00000488836 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
RN7SL28P-201ENST00000488836 IFT140Q96RY7 1462 aa15.92■□□□□ 0.14
RN7SL28P-201ENST00000488836 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
RN7SL28P-201ENST00000488836 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
RN7SL28P-201ENST00000488836 TOPBP1Q92547 1522 aa15.85■□□□□ 0.13
RN7SL28P-201ENST00000488836 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.12
RN7SL28P-201ENST00000488836 DNMBPQ6XZF7 1577 aa15.81■□□□□ 0.12
RN7SL28P-201ENST00000488836 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
RN7SL28P-201ENST00000488836 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
RN7SL28P-201ENST00000488836 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
RN7SL28P-201ENST00000488836 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
RN7SL28P-201ENST00000488836 ARHGEF11O15085 1522 aa15.74■□□□□ 0.11
RN7SL28P-201ENST00000488836 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
RN7SL28P-201ENST00000488836 AQRO60306 1485 aaKnown RBP eCLIP15.69■□□□□ 0.1
RN7SL28P-201ENST00000488836 POLA1P09884 1462 aaPredicted RBP15.68■□□□□ 0.1
RN7SL28P-201ENST00000488836 CHD1O14646 1710 aa15.67■□□□□ 0.1
RN7SL28P-201ENST00000488836 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
RN7SL28P-201ENST00000488836 FBLN2P98095 1184 aa15.64■□□□□ 0.09
RN7SL28P-201ENST00000488836 CYB5RLQ6IPT4 315 aa15.64■□□□□ 0.09
RN7SL28P-201ENST00000488836 SOGA1O94964 1423 aa15.63■□□□□ 0.09
RN7SL28P-201ENST00000488836 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
RN7SL28P-201ENST00000488836 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
RN7SL28P-201ENST00000488836 FGD5Q6ZNL6 1462 aa15.57■□□□□ 0.08
RN7SL28P-201ENST00000488836 ARAP1Q96P48 1450 aa15.56■□□□□ 0.08
RN7SL28P-201ENST00000488836 MAGI1Q96QZ7 1491 aaPredicted RBP15.56■□□□□ 0.08
RN7SL28P-201ENST00000488836 SNAPC4Q5SXM2 1469 aa15.54■□□□□ 0.08
RN7SL28P-201ENST00000488836 CHMP7Q8WUX9 453 aaPredicted RBP15.54■□□□□ 0.08
RN7SL28P-201ENST00000488836 SYNJ1O43426 1573 aa15.53■□□□□ 0.08
RN7SL28P-201ENST00000488836 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
RN7SL28P-201ENST00000488836 GRIN2BQ13224 1484 aa15.52■□□□□ 0.08
RN7SL28P-201ENST00000488836 CUX1P39880 1505 aa15.51■□□□□ 0.07
RN7SL28P-201ENST00000488836 CLASP1Q7Z460 1538 aa15.5■□□□□ 0.07
RN7SL28P-201ENST00000488836 SYNJ2O15056 1496 aa15.49■□□□□ 0.07
RN7SL28P-201ENST00000488836 GAPVD1Q14C86 1478 aa15.44■□□□□ 0.06
RN7SL28P-201ENST00000488836 PBRM1Q86U86 1689 aa15.43■□□□□ 0.06
RN7SL28P-201ENST00000488836 ABCA10Q8WWZ4 1543 aa15.41■□□□□ 0.06
RN7SL28P-201ENST00000488836 ABCA5Q8WWZ7 1642 aa15.38■□□□□ 0.05
RN7SL28P-201ENST00000488836 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
RN7SL28P-201ENST00000488836 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
RN7SL28P-201ENST00000488836 SUPT5HO00267 1087 aaKnown RBP15.31■□□□□ 0.04
RN7SL28P-201ENST00000488836 GRIN2AQ12879 1464 aa15.31■□□□□ 0.04
RN7SL28P-201ENST00000488836 TOP2BQ02880 1626 aa15.28■□□□□ 0.04
RN7SL28P-201ENST00000488836 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
RN7SL28P-201ENST00000488836 BIVM-ERCC5R4GMW8 1640 aa15.27■□□□□ 0.03
RN7SL28P-201ENST00000488836 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
RN7SL28P-201ENST00000488836 NUP160Q12769 1436 aa15.26■□□□□ 0.03
RN7SL28P-201ENST00000488836 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
RN7SL28P-201ENST00000488836 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
RN7SL28P-201ENST00000488836 SHROOM2Q13796 1616 aa15.21■□□□□ 0.02
RN7SL28P-201ENST00000488836 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms